RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 CTAG2O75638 210 aa2.17□□□□□ -2.06
SNRNP27-204ENST00000487029 RP2O75695 350 aa2.17□□□□□ -2.06
SNRNP27-204ENST00000487029 ARG1P05089 322 aa2.17□□□□□ -2.06
SNRNP27-204ENST00000487029 BCHEP06276 602 aa2.17□□□□□ -2.06
SNRNP27-204ENST00000487029 OR8G3PP0DMU2 310 aa2.17□□□□□ -2.06
SNRNP27-204ENST00000487029 OR1E1P30953 314 aa2.17□□□□□ -2.06
SNRNP27-204ENST00000487029 CEACAM3P40198 252 aa2.17□□□□□ -2.06
SNRNP27-204ENST00000487029 CCT6AP40227 531 aaKnown RBP2.17□□□□□ -2.06
SNRNP27-204ENST00000487029 VSX2P58304 361 aaPredicted RBP2.17□□□□□ -2.06
SNRNP27-204ENST00000487029 PFN3P60673 137 aa2.17□□□□□ -2.06
SNRNP27-204ENST00000487029 RAP1AP62834 184 aa2.17□□□□□ -2.06
SNRNP27-204ENST00000487029 EBI3Q14213 229 aa2.17□□□□□ -2.06
SNRNP27-204ENST00000487029 PON2Q15165 354 aa2.17□□□□□ -2.06
SNRNP27-204ENST00000487029 PTGES3Q15185 160 aaKnown RBP2.17□□□□□ -2.06
SNRNP27-204ENST00000487029 RGNQ15493 299 aa2.17□□□□□ -2.06
SNRNP27-204ENST00000487029 WHAMMP3Q1A5X7 153 aa2.17□□□□□ -2.06
SNRNP27-204ENST00000487029 C1orf185Q5T7R7 199 aa2.17□□□□□ -2.06
SNRNP27-204ENST00000487029 ZNF691Q5VV52 312 aa2.17□□□□□ -2.06
SNRNP27-204ENST00000487029 PLET1Q6UQ28 207 aa2.17□□□□□ -2.06
SNRNP27-204ENST00000487029 SPESP1Q6UW49 350 aa2.17□□□□□ -2.06
SNRNP27-204ENST00000487029 FBXW12Q6X9E4 464 aa2.17□□□□□ -2.06
SNRNP27-204ENST00000487029 PRSS58Q8IYP2 241 aa2.17□□□□□ -2.06
SNRNP27-204ENST00000487029 PQLC3Q8N755 202 aa2.17□□□□□ -2.06
SNRNP27-204ENST00000487029 ZFP41Q8N8Y5 198 aa2.17□□□□□ -2.06
SNRNP27-204ENST00000487029 BBOF1Q8ND07 529 aa2.17□□□□□ -2.06
SNRNP27-204ENST00000487029 OR10G2Q8NGC3 310 aa2.17□□□□□ -2.06
SNRNP27-204ENST00000487029 OR9G4Q8NGQ1 327 aa2.17□□□□□ -2.06
SNRNP27-204ENST00000487029 OR5K2Q8NHB8 316 aa2.17□□□□□ -2.06
SNRNP27-204ENST00000487029 TMEM230Q96A57 120 aa2.17□□□□□ -2.06
SNRNP27-204ENST00000487029 NTAN1Q96AB6 310 aa2.17□□□□□ -2.06
SNRNP27-204ENST00000487029 TM4SF18Q96CE8 201 aa2.17□□□□□ -2.06
SNRNP27-204ENST00000487029 STARD4Q96DR4 205 aa2.17□□□□□ -2.06
SNRNP27-204ENST00000487029 ZNF681Q96N22 645 aa2.17□□□□□ -2.06
SNRNP27-204ENST00000487029 VCX3BQ9H321 246 aa2.17□□□□□ -2.06
SNRNP27-204ENST00000487029 SAV1Q9H4B6 383 aaPredicted RBP2.17□□□□□ -2.06
SNRNP27-204ENST00000487029 RETNQ9HD89 108 aa2.17□□□□□ -2.06
SNRNP27-204ENST00000487029 VCX3AQ9NNX9 186 aa2.17□□□□□ -2.06
SNRNP27-204ENST00000487029 CCNB1IP1Q9NPC3 277 aa2.17□□□□□ -2.06
SNRNP27-204ENST00000487029 CTSFQ9UBX1 484 aa2.17□□□□□ -2.06
SNRNP27-204ENST00000487029 CAB39Q9Y376 341 aaPredicted RBP2.17□□□□□ -2.06
SNRNP27-204ENST00000487029 KIF15Q9NS87 1388 aa2.17□□□□□ -2.06
SNRNP27-204ENST00000487029 SCAF11Q99590 1463 aaKnown RBP2.17□□□□□ -2.06
SNRNP27-204ENST00000487029 MAP3K1Q13233 1512 aa2.17□□□□□ -2.06
SNRNP27-204ENST00000487029 ARHGAP31Q2M1Z3 1444 aa2.17□□□□□ -2.06
SNRNP27-204ENST00000487029 MROH7-TTC4A0A0A0MT08 1334 aa2.17□□□□□ -2.06
SNRNP27-204ENST00000487029 RAB3GAP2Q9H2M9 1393 aa2.16□□□□□ -2.06
SNRNP27-204ENST00000487029 IGLV1-50A0A075B6I6 118 aa2.16□□□□□ -2.06
SNRNP27-204ENST00000487029 IGKV2D-24A0A075B6R9 120 aa2.16□□□□□ -2.06
SNRNP27-204ENST00000487029 KCNE1BA0A087WTH5 132 aa2.16□□□□□ -2.06
SNRNP27-204ENST00000487029 IGLV1-36A0A0B4J1U3 117 aa2.16□□□□□ -2.06
SNRNP27-204ENST00000487029 IGHV5-10-1A0A0J9YXX1 117 aa2.16□□□□□ -2.06
SNRNP27-204ENST00000487029 A0A1B0GW55 424 aa2.16□□□□□ -2.06
SNRNP27-204ENST00000487029 A0A1W2PP18 115 aa2.16□□□□□ -2.06
SNRNP27-204ENST00000487029 ERICH2A1L162 156 aa2.16□□□□□ -2.06
SNRNP27-204ENST00000487029 RAD51CO43502 376 aa2.16□□□□□ -2.06
SNRNP27-204ENST00000487029 AQP8O94778 261 aa2.16□□□□□ -2.06
SNRNP27-204ENST00000487029 CCNB2O95067 398 aa2.16□□□□□ -2.06
SNRNP27-204ENST00000487029 IGKV3-11P04433 115 aa2.16□□□□□ -2.06
SNRNP27-204ENST00000487029 UBTFL6P0CB48 400 aaPredicted RBP2.16□□□□□ -2.06
SNRNP27-204ENST00000487029 DUX4L2P0CJ85 424 aa2.16□□□□□ -2.06
SNRNP27-204ENST00000487029 DUX4L3P0CJ86 424 aa2.16□□□□□ -2.06
SNRNP27-204ENST00000487029 DUX4L5P0CJ88 424 aa2.16□□□□□ -2.06
SNRNP27-204ENST00000487029 DUX4L6P0CJ89 424 aa2.16□□□□□ -2.06
SNRNP27-204ENST00000487029 DUX4L7P0CJ90 424 aa2.16□□□□□ -2.06
SNRNP27-204ENST00000487029 IGHV1-8P0DP01 117 aa2.16□□□□□ -2.06
SNRNP27-204ENST00000487029 ZNF32P17041 273 aa2.16□□□□□ -2.06
SNRNP27-204ENST00000487029 PGAM1P18669 254 aa2.16□□□□□ -2.06
SNRNP27-204ENST00000487029 GGT1P19440 569 aa2.16□□□□□ -2.06
SNRNP27-204ENST00000487029 RANBP1P43487 201 aa2.16□□□□□ -2.06
SNRNP27-204ENST00000487029 IFT88Q13099 833 aa2.16□□□□□ -2.06
SNRNP27-204ENST00000487029 ILKQ13418 452 aa2.16□□□□□ -2.06
SNRNP27-204ENST00000487029 IRF4Q15306 451 aa2.16□□□□□ -2.06
SNRNP27-204ENST00000487029 SNCBQ16143 134 aa2.16□□□□□ -2.06
SNRNP27-204ENST00000487029 FAM83EQ2M2I3 478 aa2.16□□□□□ -2.06
SNRNP27-204ENST00000487029 GPR107Q5VW38 600 aa2.16□□□□□ -2.06
SNRNP27-204ENST00000487029 METTL21CQ5VZV1 264 aa2.16□□□□□ -2.06
SNRNP27-204ENST00000487029 CEMP1Q6PRD7 247 aaPredicted RBP2.16□□□□□ -2.06
SNRNP27-204ENST00000487029 PGAM4Q8N0Y7 254 aa2.16□□□□□ -2.06
SNRNP27-204ENST00000487029 ARHGAP18Q8N392 663 aa2.16□□□□□ -2.06
SNRNP27-204ENST00000487029 JAGN1Q8N5M9 183 aa2.16□□□□□ -2.06
SNRNP27-204ENST00000487029 COMMD1Q8N668 190 aa2.16□□□□□ -2.06
SNRNP27-204ENST00000487029 BPIFCQ8NFQ6 507 aa2.16□□□□□ -2.06
SNRNP27-204ENST00000487029 OR5W2Q8NH69 310 aa2.16□□□□□ -2.06
SNRNP27-204ENST00000487029 ERMNQ8TAM6 284 aa2.16□□□□□ -2.06
SNRNP27-204ENST00000487029 MRGPRFQ96AM1 343 aa2.16□□□□□ -2.06
SNRNP27-204ENST00000487029 PDXPQ96GD0 296 aa2.16□□□□□ -2.06
SNRNP27-204ENST00000487029 ALS2CR12Q96Q35 445 aa2.16□□□□□ -2.06
SNRNP27-204ENST00000487029 TSC22D3Q99576 134 aa2.16□□□□□ -2.06
SNRNP27-204ENST00000487029 NDFIP1Q9BT67 221 aa2.16□□□□□ -2.06
SNRNP27-204ENST00000487029 TEKT3Q9BXF9 490 aa2.16□□□□□ -2.06
SNRNP27-204ENST00000487029 ANKRD60Q9BZ19 345 aa2.16□□□□□ -2.06
SNRNP27-204ENST00000487029 ZYG11BQ9C0D3 744 aa2.16□□□□□ -2.06
SNRNP27-204ENST00000487029 ELOVL6Q9H5J4 265 aa2.16□□□□□ -2.06
SNRNP27-204ENST00000487029 SYNDIG1Q9H7V2 258 aa2.16□□□□□ -2.06
SNRNP27-204ENST00000487029 UBE2ZQ9H832 354 aaPredicted RBP2.16□□□□□ -2.06
SNRNP27-204ENST00000487029 PATZ1Q9HBE1 687 aaKnown RBP2.16□□□□□ -2.06
SNRNP27-204ENST00000487029 MRPS30Q9NP92 439 aaKnown RBP2.16□□□□□ -2.06
SNRNP27-204ENST00000487029 DUX4Q9UBX2 424 aa2.16□□□□□ -2.06
SNRNP27-204ENST00000487029 TRMT112Q9UI30 125 aaKnown RBP2.16□□□□□ -2.06
SNRNP27-204ENST00000487029 ZNF222Q9UK12 451 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms