RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 VHLLQ6RSH7 139 aa4.89□□□□□ -1.63
COPS3-208ENST00000486032 CFAP77Q6ZQR2 320 aa4.89□□□□□ -1.63
COPS3-208ENST00000486032 FOXL2NBQ6ZUU3 175 aa4.89□□□□□ -1.63
COPS3-208ENST00000486032 SLC16A9Q7RTY1 509 aa4.89□□□□□ -1.63
COPS3-208ENST00000486032 KRT77Q7Z794 578 aa4.89□□□□□ -1.63
COPS3-208ENST00000486032 MYPOPQ86VE0 399 aaPredicted RBP4.89□□□□□ -1.63
COPS3-208ENST00000486032 P2RY8Q86VZ1 359 aa4.89□□□□□ -1.63
COPS3-208ENST00000486032 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.89□□□□□ -1.63
COPS3-208ENST00000486032 TIGD4Q8IY51 512 aa4.89□□□□□ -1.63
COPS3-208ENST00000486032 ZNF786Q8N393 782 aa4.89□□□□□ -1.63
COPS3-208ENST00000486032 GJC3Q8NFK1 279 aa4.89□□□□□ -1.63
COPS3-208ENST00000486032 OR4F15Q8NGB8 312 aa4.89□□□□□ -1.63
COPS3-208ENST00000486032 RHOXF1Q8NHV9 184 aa4.89□□□□□ -1.63
COPS3-208ENST00000486032 APH1BQ8WW43 257 aa4.89□□□□□ -1.63
COPS3-208ENST00000486032 PLPPR2Q96GM1 343 aa4.89□□□□□ -1.63
COPS3-208ENST00000486032 DACH2Q96NX9 599 aa4.89□□□□□ -1.63
COPS3-208ENST00000486032 CNN2Q99439 309 aaKnown RBP4.89□□□□□ -1.63
COPS3-208ENST00000486032 RHNO1Q9BSD3 238 aa4.89□□□□□ -1.63
COPS3-208ENST00000486032 COPS4Q9BT78 406 aa4.89□□□□□ -1.63
COPS3-208ENST00000486032 OR2H1Q9GZK4 316 aa4.89□□□□□ -1.63
COPS3-208ENST00000486032 WNT5BQ9H1J7 359 aa4.89□□□□□ -1.63
COPS3-208ENST00000486032 C1orf198Q9H425 327 aa4.89□□□□□ -1.63
COPS3-208ENST00000486032 CDH20Q9HBT6 801 aa4.89□□□□□ -1.63
COPS3-208ENST00000486032 NGBQ9NPG2 151 aa4.89□□□□□ -1.63
COPS3-208ENST00000486032 ZNF224Q9NZL3 707 aa4.89□□□□□ -1.63
COPS3-208ENST00000486032 NPAP1Q9NZP6 1156 aa4.89□□□□□ -1.63
COPS3-208ENST00000486032 PLEKHB1Q9UF11 243 aaPredicted RBP4.89□□□□□ -1.63
COPS3-208ENST00000486032 WARS2Q9UGM6 360 aaKnown RBP4.89□□□□□ -1.63
COPS3-208ENST00000486032 LAMP5Q9UJQ1 280 aa4.89□□□□□ -1.63
COPS3-208ENST00000486032 POU2F3Q9UKI9 436 aa4.89□□□□□ -1.63
COPS3-208ENST00000486032 IKZF2Q9UKS7 526 aa4.89□□□□□ -1.63
COPS3-208ENST00000486032 RAB26Q9ULW5 256 aa4.89□□□□□ -1.63
COPS3-208ENST00000486032 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.89□□□□□ -1.63
COPS3-208ENST00000486032 COPS3Q9UNS2 423 aa4.89□□□□□ -1.63
COPS3-208ENST00000486032 RPL36Q9Y3U8 105 aaKnown RBP4.89□□□□□ -1.63
COPS3-208ENST00000486032 PCDHGB5Q9Y5G0 923 aa4.89□□□□□ -1.63
COPS3-208ENST00000486032 TIMM10BQ9Y5J6 103 aa4.89□□□□□ -1.63
COPS3-208ENST00000486032 KLF2Q9Y5W3 355 aaPredicted RBP4.89□□□□□ -1.63
COPS3-208ENST00000486032 LHFPL6Q9Y693 200 aa4.89□□□□□ -1.63
COPS3-208ENST00000486032 ATP23Q9Y6H3 246 aa4.89□□□□□ -1.63
COPS3-208ENST00000486032 AKAP9Q99996 3911 aa4.89□□□□□ -1.63
COPS3-208ENST00000486032 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.88□□□□□ -1.63
COPS3-208ENST00000486032 DAPL1A0PJW8 107 aa4.88□□□□□ -1.63
COPS3-208ENST00000486032 C5orf49A4QMS7 147 aa4.88□□□□□ -1.63
COPS3-208ENST00000486032 DPRXA6NFQ7 191 aa4.88□□□□□ -1.63
COPS3-208ENST00000486032 ATP6V1G2-DDX39BF2Z307 99 aa4.88□□□□□ -1.63
COPS3-208ENST00000486032 F5H5K5 113 aa4.88□□□□□ -1.63
COPS3-208ENST00000486032 ABCD4O14678 606 aa4.88□□□□□ -1.63
COPS3-208ENST00000486032 TBX1O43435 398 aa4.88□□□□□ -1.63
COPS3-208ENST00000486032 PLAUP00749 431 aa4.88□□□□□ -1.63
COPS3-208ENST00000486032 HRGP04196 525 aa4.88□□□□□ -1.63
COPS3-208ENST00000486032 CD3EP07766 207 aa4.88□□□□□ -1.63
COPS3-208ENST00000486032 LYNP07948 512 aa4.88□□□□□ -1.63
COPS3-208ENST00000486032 DBHP09172 617 aa4.88□□□□□ -1.63
COPS3-208ENST00000486032 H2BFMP0C1H6 154 aa4.88□□□□□ -1.63
COPS3-208ENST00000486032 SBK2P0C263 348 aa4.88□□□□□ -1.63
COPS3-208ENST00000486032 SLC2A1P11166 492 aa4.88□□□□□ -1.63
COPS3-208ENST00000486032 CRYGSP22914 178 aa4.88□□□□□ -1.63
COPS3-208ENST00000486032 MYF6P23409 242 aa4.88□□□□□ -1.63
COPS3-208ENST00000486032 CD40P25942 277 aa4.88□□□□□ -1.63
COPS3-208ENST00000486032 HSD11B1P28845 292 aa4.88□□□□□ -1.63
COPS3-208ENST00000486032 SLC6A9P48067 706 aa4.88□□□□□ -1.63
COPS3-208ENST00000486032 GDI2P50395 445 aaKnown RBP4.88□□□□□ -1.63
COPS3-208ENST00000486032 KRTAP10-9P60411 292 aa4.88□□□□□ -1.63
COPS3-208ENST00000486032 CXCR4P61073 352 aa4.88□□□□□ -1.63
COPS3-208ENST00000486032 BSPH1Q075Z2 132 aa4.88□□□□□ -1.63
COPS3-208ENST00000486032 MED21Q13503 144 aa4.88□□□□□ -1.63
COPS3-208ENST00000486032 RAB35Q15286 201 aa4.88□□□□□ -1.63
COPS3-208ENST00000486032 TBC1D28Q2M2D7 210 aa4.88□□□□□ -1.63
COPS3-208ENST00000486032 TP53I3Q53FA7 332 aa4.88□□□□□ -1.63
COPS3-208ENST00000486032 ELFN2Q5R3F8 820 aa4.88□□□□□ -1.63
COPS3-208ENST00000486032 C6orf141Q5SZD1 244 aa4.88□□□□□ -1.63
COPS3-208ENST00000486032 SLC18B1Q6NT16 456 aa4.88□□□□□ -1.63
COPS3-208ENST00000486032 ADAM5Q6NVV9 412 aa4.88□□□□□ -1.63
COPS3-208ENST00000486032 SLC22A25Q6T423 547 aa4.88□□□□□ -1.63
COPS3-208ENST00000486032 TMEM108Q6UXF1 575 aa4.88□□□□□ -1.63
COPS3-208ENST00000486032 LRRN1Q6UXK5 716 aa4.88□□□□□ -1.63
COPS3-208ENST00000486032 PLEKHG7Q6ZR37 379 aa4.88□□□□□ -1.63
COPS3-208ENST00000486032 USP51Q70EK9 711 aa4.88□□□□□ -1.63
COPS3-208ENST00000486032 AHSA2Q719I0 299 aa4.88□□□□□ -1.63
COPS3-208ENST00000486032 ZNF627Q7L945 461 aa4.88□□□□□ -1.63
COPS3-208ENST00000486032 SSX6Q7RTT6 188 aa4.88□□□□□ -1.63
COPS3-208ENST00000486032 LHFPL3Q86UP9 236 aa4.88□□□□□ -1.63
COPS3-208ENST00000486032 TMEM200AQ86VY9 491 aa4.88□□□□□ -1.63
COPS3-208ENST00000486032 CCDC36Q8IYA8 594 aa4.88□□□□□ -1.63
COPS3-208ENST00000486032 STX19Q8N4C7 294 aa4.88□□□□□ -1.63
COPS3-208ENST00000486032 RFLNBQ8N5W9 214 aa4.88□□□□□ -1.63
COPS3-208ENST00000486032 ZNF283Q8N7M2 679 aa4.88□□□□□ -1.63
COPS3-208ENST00000486032 ZNF540Q8NDQ6 660 aa4.88□□□□□ -1.63
COPS3-208ENST00000486032 CPEB3Q8NE35 698 aaKnown RBP4.88□□□□□ -1.63
COPS3-208ENST00000486032 SLC30A7Q8NEW0 376 aa4.88□□□□□ -1.63
COPS3-208ENST00000486032 OR52I1Q8NGK6 324 aa4.88□□□□□ -1.63
COPS3-208ENST00000486032 OR1F12Q8NHA8 337 aa4.88□□□□□ -1.63
COPS3-208ENST00000486032 FAM222BQ8WU58 562 aa4.88□□□□□ -1.63
COPS3-208ENST00000486032 SNX33Q8WV41 574 aa4.88□□□□□ -1.63
COPS3-208ENST00000486032 NEUROG1Q92886 237 aa4.88□□□□□ -1.63
COPS3-208ENST00000486032 LGALS12Q96DT0 336 aa4.88□□□□□ -1.63
COPS3-208ENST00000486032 SLAMF6Q96DU3 332 aa4.88□□□□□ -1.63
COPS3-208ENST00000486032 MAP6Q96JE9 813 aa4.88□□□□□ -1.63
COPS3-208ENST00000486032 AMELYQ99218 206 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms