RNA–Protein interactions for RNA: ENST00000485450.5

USP4-211, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 2

Gene USP4, Length 3,541 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-211ENST00000485450 ABRACLQ9P1F3 81 aa6.89□□□□□ -1.31
USP4-211ENST00000485450 C5AR2Q9P296 337 aa6.89□□□□□ -1.31
USP4-211ENST00000485450 ZNF282Q9UDV7 671 aaPredicted RBP6.89□□□□□ -1.31
USP4-211ENST00000485450 TGFBR3LH3BV60 316 aa6.88□□□□□ -1.31
USP4-211ENST00000485450 H7BY64 318 aa6.88□□□□□ -1.31
USP4-211ENST00000485450 J3KRW8 73 aa6.88□□□□□ -1.31
USP4-211ENST00000485450 ADAM10O14672 748 aa6.88□□□□□ -1.31
USP4-211ENST00000485450 BCL2L11O43521 198 aa6.88□□□□□ -1.31
USP4-211ENST00000485450 CTNSO60931 367 aa6.88□□□□□ -1.31
USP4-211ENST00000485450 IGHA1P01876 353 aa6.88□□□□□ -1.31
USP4-211ENST00000485450 ACKR3P25106 362 aa6.88□□□□□ -1.31
USP4-211ENST00000485450 AGTR1P30556 359 aa6.88□□□□□ -1.31
USP4-211ENST00000485450 ATP6V1E1P36543 226 aa6.88□□□□□ -1.31
USP4-211ENST00000485450 LUMP51884 338 aaPredicted RBP6.88□□□□□ -1.31
USP4-211ENST00000485450 SORDQ00796 357 aa6.88□□□□□ -1.31
USP4-211ENST00000485450 OC90Q02509 493 aaPredicted RBP6.88□□□□□ -1.31
USP4-211ENST00000485450 DCAF10Q5QP82 559 aa6.88□□□□□ -1.31
USP4-211ENST00000485450 PHF19Q5T6S3 580 aa6.88□□□□□ -1.31
USP4-211ENST00000485450 DCAF12L2Q5VW00 463 aa6.88□□□□□ -1.31
USP4-211ENST00000485450 RPUSD3Q6P087 351 aaKnown RBP6.88□□□□□ -1.31
USP4-211ENST00000485450 OR52N2Q8NGI0 321 aa6.88□□□□□ -1.31
USP4-211ENST00000485450 C22orf15Q8WYQ4 148 aa6.88□□□□□ -1.31
USP4-211ENST00000485450 PHYHIPQ92561 330 aa6.88□□□□□ -1.31
USP4-211ENST00000485450 PRAP1Q96NZ9 151 aa6.88□□□□□ -1.31
USP4-211ENST00000485450 GSX1Q9H4S2 264 aaPredicted RBP6.88□□□□□ -1.31
USP4-211ENST00000485450 TMEM138Q9NPI0 162 aa6.88□□□□□ -1.31
USP4-211ENST00000485450 MRPL15Q9P015 296 aaKnown RBP6.88□□□□□ -1.31
USP4-211ENST00000485450 FBXW2Q9UKT8 454 aa6.88□□□□□ -1.31
USP4-211ENST00000485450 CCDC88CQ9P219 2028 aa6.88□□□□□ -1.31
USP4-211ENST00000485450 EML6Q6ZMW3 1958 aa6.88□□□□□ -1.31
USP4-211ENST00000485450 TRAV14DV4A0A0A6YYC5 116 aa6.88□□□□□ -1.31
USP4-211ENST00000485450 GNG14A0A1W2PPG7 69 aa6.88□□□□□ -1.31
USP4-211ENST00000485450 KANTRA0A1W2PQU2 76 aa6.88□□□□□ -1.31
USP4-211ENST00000485450 CLEC18AA5D8T8 446 aa6.88□□□□□ -1.31
USP4-211ENST00000485450 TMEM238C9JI98 176 aa6.88□□□□□ -1.31
USP4-211ENST00000485450 ATP1B1P05026 303 aa6.88□□□□□ -1.31
USP4-211ENST00000485450 SERPINA5P05154 406 aa6.88□□□□□ -1.31
USP4-211ENST00000485450 CLUP10909 449 aa6.88□□□□□ -1.31
USP4-211ENST00000485450 CD79AP11912 226 aa6.88□□□□□ -1.31
USP4-211ENST00000485450 NKAIN1Q4KMZ8 207 aa6.88□□□□□ -1.31
USP4-211ENST00000485450 OR4C11Q6IEV9 310 aa6.88□□□□□ -1.31
USP4-211ENST00000485450 RAB12Q6IQ22 244 aa6.88□□□□□ -1.31
USP4-211ENST00000485450 ADNP2Q6IQ32 1131 aa6.88□□□□□ -1.31
USP4-211ENST00000485450 ZNF322Q6U7Q0 402 aaPredicted RBP6.88□□□□□ -1.31
USP4-211ENST00000485450 CLEC18BQ6UXF7 455 aa6.88□□□□□ -1.31
USP4-211ENST00000485450 C6orf120Q7Z4R8 191 aa6.88□□□□□ -1.31
USP4-211ENST00000485450 MRGPREQ86SM8 312 aa6.88□□□□□ -1.31
USP4-211ENST00000485450 TMEM200AQ86VY9 491 aa6.88□□□□□ -1.31
USP4-211ENST00000485450 CLEC18CQ8NCF0 446 aa6.88□□□□□ -1.31
USP4-211ENST00000485450 OR52B4Q8NGK2 314 aa6.88□□□□□ -1.31
USP4-211ENST00000485450 OR4A4PQ8NGN8 299 aa6.88□□□□□ -1.31
USP4-211ENST00000485450 OR1J4Q8NGS1 313 aa6.88□□□□□ -1.31
USP4-211ENST00000485450 ZNF671Q8TAW3 534 aa6.88□□□□□ -1.31
USP4-211ENST00000485450 KCNE4Q8WWG9 221 aa6.88□□□□□ -1.31
USP4-211ENST00000485450 ARL11Q969Q4 196 aa6.88□□□□□ -1.31
USP4-211ENST00000485450 ZNF845Q96IR2 970 aaPredicted RBP6.88□□□□□ -1.31
USP4-211ENST00000485450 EGFL8Q99944 293 aa6.88□□□□□ -1.31
USP4-211ENST00000485450 MRI1Q9BV20 369 aa6.88□□□□□ -1.31
USP4-211ENST00000485450 EBPLQ9BY08 206 aa6.88□□□□□ -1.31
USP4-211ENST00000485450 KLHL31Q9H511 634 aa6.88□□□□□ -1.31
USP4-211ENST00000485450 MMP25Q9NPA2 562 aa6.88□□□□□ -1.31
USP4-211ENST00000485450 EXOGQ9Y2C4 368 aaKnown RBP6.88□□□□□ -1.31
USP4-211ENST00000485450 TMEM72A0PK05 275 aa6.88□□□□□ -1.31
USP4-211ENST00000485450 GOSR2O14653 212 aa6.88□□□□□ -1.31
USP4-211ENST00000485450 NDUFS4O43181 175 aa6.88□□□□□ -1.31
USP4-211ENST00000485450 REM1O75628 298 aa6.88□□□□□ -1.31
USP4-211ENST00000485450 VSIG10L2P0DP72 767 aa6.88□□□□□ -1.31
USP4-211ENST00000485450 EPXP11678 715 aa6.88□□□□□ -1.31
USP4-211ENST00000485450 S1PR1P21453 382 aa6.88□□□□□ -1.31
USP4-211ENST00000485450 HIST1H1TP22492 207 aaPredicted RBP6.88□□□□□ -1.31
USP4-211ENST00000485450 NRG3P56975 720 aa6.88□□□□□ -1.31
USP4-211ENST00000485450 CHIT1Q13231 466 aa6.88□□□□□ -1.31
USP4-211ENST00000485450 RUNX2Q13950 521 aa6.88□□□□□ -1.31
USP4-211ENST00000485450 ZNF630Q2M218 657 aaPredicted RBP6.88□□□□□ -1.31
USP4-211ENST00000485450 ZNF791Q3KP31 576 aaPredicted RBP6.88□□□□□ -1.31
USP4-211ENST00000485450 TMEM244Q5VVB8 128 aa6.88□□□□□ -1.31
USP4-211ENST00000485450 ZNF620Q6ZNG0 422 aa6.88□□□□□ -1.31
USP4-211ENST00000485450 ZNF546Q86UE3 836 aa6.88□□□□□ -1.31
USP4-211ENST00000485450 OR51S1Q8NGJ8 323 aa6.88□□□□□ -1.31
USP4-211ENST00000485450 S100PBPQ96BU1 408 aa6.88□□□□□ -1.31
USP4-211ENST00000485450 SLC25A36Q96CQ1 311 aa6.88□□□□□ -1.31
USP4-211ENST00000485450 MALSU1Q96EH3 234 aa6.88□□□□□ -1.31
USP4-211ENST00000485450 ZNF75AQ96N20 296 aa6.88□□□□□ -1.31
USP4-211ENST00000485450 ULBP3Q9BZM4 244 aa6.88□□□□□ -1.31
USP4-211ENST00000485450 LAT2Q9GZY6 243 aa6.88□□□□□ -1.31
USP4-211ENST00000485450 ATG10Q9H0Y0 220 aa6.88□□□□□ -1.31
USP4-211ENST00000485450 GAL3ST2Q9H3Q3 398 aa6.88□□□□□ -1.31
USP4-211ENST00000485450 CFAP47Q6ZTR5 3102 aa6.87□□□□□ -1.31
USP4-211ENST00000485450 GABARAPH6UMI1 98 aa6.87□□□□□ -1.31
USP4-211ENST00000485450 OR2F2O95006 317 aa6.87□□□□□ -1.31
USP4-211ENST00000485450 BCHEP06276 602 aa6.87□□□□□ -1.31
USP4-211ENST00000485450 CD2P06729 351 aa6.87□□□□□ -1.31
USP4-211ENST00000485450 ANXA2P07355 339 aaKnown RBP6.87□□□□□ -1.31
USP4-211ENST00000485450 SLC35G6P0C7Q6 338 aa6.87□□□□□ -1.31
USP4-211ENST00000485450 JMJD7P0C870 316 aa6.87□□□□□ -1.31
USP4-211ENST00000485450 BTG2P78543 158 aa6.87□□□□□ -1.31
USP4-211ENST00000485450 OR2F1Q13607 317 aa6.87□□□□□ -1.31
USP4-211ENST00000485450 MAPK14Q16539 360 aa6.87□□□□□ -1.31
USP4-211ENST00000485450 FAM71E1Q6IPT2 247 aa6.87□□□□□ -1.31
USP4-211ENST00000485450 PAPD4Q6PIY7 484 aaKnown RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms