RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 GLB1L2Q8IW92 636 aa16.15■□□□□ 0.18
COL27A1-205ENST00000485397 OR10AD1Q8NGE0 317 aa16.15■□□□□ 0.18
COL27A1-205ENST00000485397 MRI1Q9BV20 369 aa16.15■□□□□ 0.18
COL27A1-205ENST00000485397 ZNF747Q9BV97 191 aa16.15■□□□□ 0.18
COL27A1-205ENST00000485397 NDEL1Q9GZM8 345 aa16.15■□□□□ 0.18
COL27A1-205ENST00000485397 NUAK2Q9H093 628 aa16.15■□□□□ 0.18
COL27A1-205ENST00000485397 ANKRD19PQ9H560 264 aa16.15■□□□□ 0.18
COL27A1-205ENST00000485397 VSX1Q9NZR4 365 aaPredicted RBP16.15■□□□□ 0.18
COL27A1-205ENST00000485397 IER3IP1Q9Y5U9 82 aa16.15■□□□□ 0.18
COL27A1-205ENST00000485397 IGHV3-64DA0A0J9YX35 117 aa16.14■□□□□ 0.17
COL27A1-205ENST00000485397 DNAJC9-AS1A6NH13 148 aa16.14■□□□□ 0.17
COL27A1-205ENST00000485397 H0YL77 283 aa16.14■□□□□ 0.17
COL27A1-205ENST00000485397 SOCS2O14508 198 aa16.14■□□□□ 0.17
COL27A1-205ENST00000485397 CYB5R3P00387 301 aaPredicted RBP16.14■□□□□ 0.17
COL27A1-205ENST00000485397 WNT2P09544 360 aa16.14■□□□□ 0.17
COL27A1-205ENST00000485397 CD80P33681 288 aa16.14■□□□□ 0.17
COL27A1-205ENST00000485397 FXYD6P3P58550 94 aa16.14■□□□□ 0.17
COL27A1-205ENST00000485397 FOXL1Q12952 345 aa16.14■□□□□ 0.17
COL27A1-205ENST00000485397 ESCO2Q56NI9 601 aa16.14■□□□□ 0.17
COL27A1-205ENST00000485397 GPR139Q6DWJ6 353 aa16.14■□□□□ 0.17
COL27A1-205ENST00000485397 C8orf82Q6P1X6 216 aaPredicted RBP16.14■□□□□ 0.17
COL27A1-205ENST00000485397 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.14■□□□□ 0.17
COL27A1-205ENST00000485397 CYP4Z1Q86W10 505 aa16.14■□□□□ 0.17
COL27A1-205ENST00000485397 FAM162AQ96A26 154 aa16.14■□□□□ 0.17
COL27A1-205ENST00000485397 MEGF10Q96KG7 1140 aa16.14■□□□□ 0.17
COL27A1-205ENST00000485397 GPX7Q96SL4 187 aaPredicted RBP16.14■□□□□ 0.17
COL27A1-205ENST00000485397 GPA33Q99795 319 aa16.14■□□□□ 0.17
COL27A1-205ENST00000485397 TMEM165Q9HC07 324 aa16.14■□□□□ 0.17
COL27A1-205ENST00000485397 OR5V1Q9UGF6 321 aa16.14■□□□□ 0.17
COL27A1-205ENST00000485397 SOX21Q9Y651 276 aaPredicted RBP16.14■□□□□ 0.17
COL27A1-205ENST00000485397 IGHV3OR16-10A0A075B7F0 116 aa16.13■□□□□ 0.17
COL27A1-205ENST00000485397 H1F0P07305 194 aaKnown RBP16.13■□□□□ 0.17
COL27A1-205ENST00000485397 CDKN2AP42771 156 aaKnown RBP16.13■□□□□ 0.17
COL27A1-205ENST00000485397 OMPP47874 163 aa16.13■□□□□ 0.17
COL27A1-205ENST00000485397 PAX8Q06710 450 aa16.13■□□□□ 0.17
COL27A1-205ENST00000485397 BAMBIQ13145 260 aa16.13■□□□□ 0.17
COL27A1-205ENST00000485397 MEP1BQ16820 701 aa16.13■□□□□ 0.17
COL27A1-205ENST00000485397 FGD3Q5JSP0 725 aa16.13■□□□□ 0.17
COL27A1-205ENST00000485397 FBXW12Q6X9E4 464 aa16.13■□□□□ 0.17
COL27A1-205ENST00000485397 JAZF1Q86VZ6 243 aa16.13■□□□□ 0.17
COL27A1-205ENST00000485397 MUC20Q8N307 709 aaPredicted RBP16.13■□□□□ 0.17
COL27A1-205ENST00000485397 OR8G5Q8NG78 346 aa16.13■□□□□ 0.17
COL27A1-205ENST00000485397 RSRC1Q96IZ7 334 aaKnown RBP16.13■□□□□ 0.17
COL27A1-205ENST00000485397 TSSK2Q96PF2 358 aa16.13■□□□□ 0.17
COL27A1-205ENST00000485397 HOPXQ9BPY8 73 aaPredicted RBP16.13■□□□□ 0.17
COL27A1-205ENST00000485397 POLR1DQ9Y2S0 133 aa16.13■□□□□ 0.17
COL27A1-205ENST00000485397 MGAM2Q2M2H8 2515 aa16.12■□□□□ 0.17
COL27A1-205ENST00000485397 TRBV4-1A0A0J9YWV2 114 aa16.12■□□□□ 0.17
COL27A1-205ENST00000485397 A0A1W2PRQ8 180 aa16.12■□□□□ 0.17
COL27A1-205ENST00000485397 DCTN6O00399 190 aa16.12■□□□□ 0.17
COL27A1-205ENST00000485397 TMPRSS2O15393 492 aa16.12■□□□□ 0.17
COL27A1-205ENST00000485397 IGHV4-38-2P0DP08 117 aa16.12■□□□□ 0.17
COL27A1-205ENST00000485397 CENPAP49450 140 aa16.12■□□□□ 0.17
COL27A1-205ENST00000485397 RGS6P49758 472 aa16.12■□□□□ 0.17
COL27A1-205ENST00000485397 PAX2Q02962 417 aa16.12■□□□□ 0.17
COL27A1-205ENST00000485397 DBPQ10586 325 aaPredicted RBP16.12■□□□□ 0.17
COL27A1-205ENST00000485397 DGCR6Q14129 220 aa16.12■□□□□ 0.17
COL27A1-205ENST00000485397 SEC23BQ15437 767 aa16.12■□□□□ 0.17
COL27A1-205ENST00000485397 KCNMB1Q16558 191 aa16.12■□□□□ 0.17
COL27A1-205ENST00000485397 SLC27A4Q6P1M0 643 aa16.12■□□□□ 0.17
COL27A1-205ENST00000485397 CORO6Q6QEF8 472 aa16.12■□□□□ 0.17
COL27A1-205ENST00000485397 OR5L1Q8NGL2 311 aa16.12■□□□□ 0.17
COL27A1-205ENST00000485397 OR13G1Q8NGZ3 307 aa16.12■□□□□ 0.17
COL27A1-205ENST00000485397 ZNF582Q96NG8 517 aaPredicted RBP16.12■□□□□ 0.17
COL27A1-205ENST00000485397 MS4A7Q9GZW8 240 aaPredicted RBP16.12■□□□□ 0.17
COL27A1-205ENST00000485397 NDUFAF4Q9P032 175 aa16.12■□□□□ 0.17
COL27A1-205ENST00000485397 LRCH1Q9Y2L9 728 aa16.12■□□□□ 0.17
COL27A1-205ENST00000485397 LHFPL6Q9Y693 200 aa16.12■□□□□ 0.17
COL27A1-205ENST00000485397 UNC119BA6NIH7 251 aa16.11■□□□□ 0.17
COL27A1-205ENST00000485397 F5H5P2 479 aa16.11■□□□□ 0.17
COL27A1-205ENST00000485397 J3QW42 95 aa16.11■□□□□ 0.17
COL27A1-205ENST00000485397 MLNRO43193 412 aa16.11■□□□□ 0.17
COL27A1-205ENST00000485397 DIRAS1O95057 198 aa16.11■□□□□ 0.17
COL27A1-205ENST00000485397 RPS2P15880 293 aaKnown RBP16.11■□□□□ 0.17
COL27A1-205ENST00000485397 PRSS12P56730 875 aa16.11■□□□□ 0.17
COL27A1-205ENST00000485397 HIST1H3AP68431 136 aa16.11■□□□□ 0.17
COL27A1-205ENST00000485397 FAM201AQ5SY85 155 aa16.11■□□□□ 0.17
COL27A1-205ENST00000485397 HIST2H3PS2Q5TEC6 136 aa16.11■□□□□ 0.17
COL27A1-205ENST00000485397 SHISA2Q6UWI4 295 aa16.11■□□□□ 0.17
COL27A1-205ENST00000485397 DPY19L2P2Q6ZN68 376 aa16.11■□□□□ 0.17
COL27A1-205ENST00000485397 HIST2H3AQ71DI3 136 aa16.11■□□□□ 0.17
COL27A1-205ENST00000485397 ADCK1Q86TW2 530 aa16.11■□□□□ 0.17
COL27A1-205ENST00000485397 MOGAT3Q86VF5 341 aa16.11■□□□□ 0.17
COL27A1-205ENST00000485397 KLBQ86Z14 1044 aa16.11■□□□□ 0.17
COL27A1-205ENST00000485397 OR52E2Q8NGJ4 325 aa16.11■□□□□ 0.17
COL27A1-205ENST00000485397 TAF15Q92804 592 aaKnown RBP eCLIP16.11■□□□□ 0.17
COL27A1-205ENST00000485397 APOBEC3DQ96AK3 386 aaPredicted RBP16.11■□□□□ 0.17
COL27A1-205ENST00000485397 COQ7Q99807 217 aa16.11■□□□□ 0.17
COL27A1-205ENST00000485397 KCTD14Q9BQ13 255 aaPredicted RBP16.11■□□□□ 0.17
COL27A1-205ENST00000485397 SLC30A2Q9BRI3 323 aa16.11■□□□□ 0.17
COL27A1-205ENST00000485397 SSBP3Q9BWW4 388 aaPredicted RBP16.11■□□□□ 0.17
COL27A1-205ENST00000485397 WDR76Q9H967 626 aa16.11■□□□□ 0.17
COL27A1-205ENST00000485397 EFCAB1Q9HAE3 211 aa16.11■□□□□ 0.17
COL27A1-205ENST00000485397 ATPIF1Q9UII2 106 aa16.11■□□□□ 0.17
COL27A1-205ENST00000485397 AURKCQ9UQB9 309 aa16.11■□□□□ 0.17
COL27A1-205ENST00000485397 FAM32AQ9Y421 112 aaKnown RBP16.11■□□□□ 0.17
COL27A1-205ENST00000485397 IFNL4K9M1U5 179 aa16.1■□□□□ 0.17
COL27A1-205ENST00000485397 KCNAB3O43448 404 aa16.1■□□□□ 0.17
COL27A1-205ENST00000485397 PPP1R3DO95685 299 aa16.1■□□□□ 0.17
COL27A1-205ENST00000485397 TXNDC12O95881 172 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms