RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 J3QW42 95 aa10.93□□□□□ -0.66
HDAC6-227ENST00000485102 PLATP00750 562 aa10.93□□□□□ -0.66
HDAC6-227ENST00000485102 MSR1P21757 451 aa10.93□□□□□ -0.66
HDAC6-227ENST00000485102 TAS2R41P59536 307 aa10.93□□□□□ -0.66
HDAC6-227ENST00000485102 SEC61A1P61619 476 aaKnown RBP10.93□□□□□ -0.66
HDAC6-227ENST00000485102 PIN1Q13526 163 aaPredicted RBP10.93□□□□□ -0.66
HDAC6-227ENST00000485102 ENDOGQ14249 297 aaKnown RBP10.93□□□□□ -0.66
HDAC6-227ENST00000485102 LRRC23Q53EV4 343 aaPredicted RBP10.93□□□□□ -0.66
HDAC6-227ENST00000485102 ESCO2Q56NI9 601 aa10.93□□□□□ -0.66
HDAC6-227ENST00000485102 ALG10Q5BKT4 473 aa10.93□□□□□ -0.66
HDAC6-227ENST00000485102 ZNF774Q6NX45 483 aa10.93□□□□□ -0.66
HDAC6-227ENST00000485102 C16orf87Q6PH81 154 aa10.93□□□□□ -0.66
HDAC6-227ENST00000485102 LRRN1Q6UXK5 716 aa10.93□□□□□ -0.66
HDAC6-227ENST00000485102 Q6ZR03 302 aa10.93□□□□□ -0.66
HDAC6-227ENST00000485102 FKBP9P1Q75LS8 142 aa10.93□□□□□ -0.66
HDAC6-227ENST00000485102 CBLL1Q75N03 491 aa10.93□□□□□ -0.66
HDAC6-227ENST00000485102 UPRTQ96BW1 309 aa10.93□□□□□ -0.66
HDAC6-227ENST00000485102 HAVCR1Q96D42 359 aa10.93□□□□□ -0.66
HDAC6-227ENST00000485102 DUX5Q96PT3 197 aa10.93□□□□□ -0.66
HDAC6-227ENST00000485102 MS4A7Q9GZW8 240 aaPredicted RBP10.93□□□□□ -0.66
HDAC6-227ENST00000485102 SH3GLB1Q9Y371 365 aa10.93□□□□□ -0.66
HDAC6-227ENST00000485102 FAM32AQ9Y421 112 aaKnown RBP10.93□□□□□ -0.66
HDAC6-227ENST00000485102 A6NIZ1 184 aa10.92□□□□□ -0.66
HDAC6-227ENST00000485102 AQP12BA6NM10 295 aa10.92□□□□□ -0.66
HDAC6-227ENST00000485102 TMEM178BH3BS89 294 aa10.92□□□□□ -0.66
HDAC6-227ENST00000485102 GSC2O15499 205 aa10.92□□□□□ -0.66
HDAC6-227ENST00000485102 AHCYL1O43865 530 aa10.92□□□□□ -0.66
HDAC6-227ENST00000485102 ABHD16AO95870 558 aa10.92□□□□□ -0.66
HDAC6-227ENST00000485102 IFNW1P05000 195 aa10.92□□□□□ -0.66
HDAC6-227ENST00000485102 SMIM11AP58511 58 aa10.92□□□□□ -0.66
HDAC6-227ENST00000485102 BPIFB3P59826 476 aa10.92□□□□□ -0.66
HDAC6-227ENST00000485102 RAP1BP61224 184 aa10.92□□□□□ -0.66
HDAC6-227ENST00000485102 RAP1AP62834 184 aa10.92□□□□□ -0.66
HDAC6-227ENST00000485102 GK3PQ14409 553 aa10.92□□□□□ -0.66
HDAC6-227ENST00000485102 IFI44LQ53G44 452 aa10.92□□□□□ -0.66
HDAC6-227ENST00000485102 CYBRD1Q53TN4 286 aa10.92□□□□□ -0.66
HDAC6-227ENST00000485102 ZNF771Q7L3S4 317 aaPredicted RBP10.92□□□□□ -0.66
HDAC6-227ENST00000485102 AQP12AQ8IXF9 295 aa10.92□□□□□ -0.66
HDAC6-227ENST00000485102 LRRC75AQ8NAA5 344 aa10.92□□□□□ -0.66
HDAC6-227ENST00000485102 FAM156AQ8NDB6 213 aa10.92□□□□□ -0.66
HDAC6-227ENST00000485102 OR52E2Q8NGJ4 325 aa10.92□□□□□ -0.66
HDAC6-227ENST00000485102 PTP4A1Q93096 173 aa10.92□□□□□ -0.66
HDAC6-227ENST00000485102 SLC7A6OSQ96CW6 309 aaPredicted RBP10.92□□□□□ -0.66
HDAC6-227ENST00000485102 MAGIXQ9H6Y5 334 aa10.92□□□□□ -0.66
HDAC6-227ENST00000485102 TMEM165Q9HC07 324 aa10.92□□□□□ -0.66
HDAC6-227ENST00000485102 GCM1Q9NP62 436 aa10.92□□□□□ -0.66
HDAC6-227ENST00000485102 POLE4Q9NR33 117 aa10.92□□□□□ -0.66
HDAC6-227ENST00000485102 DCAF13Q9NV06 445 aaKnown RBP10.92□□□□□ -0.66
HDAC6-227ENST00000485102 OR5V1Q9UGF6 321 aa10.92□□□□□ -0.66
HDAC6-227ENST00000485102 A0A0G2JK05 382 aa10.91□□□□□ -0.66
HDAC6-227ENST00000485102 CEACAM18A8MTB9 384 aa10.91□□□□□ -0.66
HDAC6-227ENST00000485102 ZNF682O95780 498 aa10.91□□□□□ -0.66
HDAC6-227ENST00000485102 SERPINA1P01009 418 aa10.91□□□□□ -0.66
HDAC6-227ENST00000485102 IGHV4-38-2P0DP08 117 aa10.91□□□□□ -0.66
HDAC6-227ENST00000485102 RAC2P15153 192 aa10.91□□□□□ -0.66
HDAC6-227ENST00000485102 CTXN1P60606 82 aa10.91□□□□□ -0.66
HDAC6-227ENST00000485102 SCRN3Q0VDG4 424 aa10.91□□□□□ -0.66
HDAC6-227ENST00000485102 FHL1Q13642 323 aa10.91□□□□□ -0.66
HDAC6-227ENST00000485102 ZNF181Q2M3W8 571 aa10.91□□□□□ -0.66
HDAC6-227ENST00000485102 FAM98BQ52LJ0 330 aaKnown RBP10.91□□□□□ -0.66
HDAC6-227ENST00000485102 ZNF362Q5T0B9 420 aaPredicted RBP10.91□□□□□ -0.66
HDAC6-227ENST00000485102 LCN8Q6JVE9 175 aa10.91□□□□□ -0.66
HDAC6-227ENST00000485102 SLC27A4Q6P1M0 643 aa10.91□□□□□ -0.66
HDAC6-227ENST00000485102 BTNL3Q6UXE8 466 aa10.91□□□□□ -0.66
HDAC6-227ENST00000485102 PARP8Q8N3A8 854 aa10.91□□□□□ -0.66
HDAC6-227ENST00000485102 CLDN22Q8N7P3 220 aa10.91□□□□□ -0.66
HDAC6-227ENST00000485102 OR2Z1Q8NG97 314 aa10.91□□□□□ -0.66
HDAC6-227ENST00000485102 ITLN1Q8WWA0 313 aa10.91□□□□□ -0.66
HDAC6-227ENST00000485102 RAB40AQ8WXH6 277 aa10.91□□□□□ -0.66
HDAC6-227ENST00000485102 TMIGD2Q96BF3 282 aa10.91□□□□□ -0.66
HDAC6-227ENST00000485102 CMBLQ96DG6 245 aa10.91□□□□□ -0.66
HDAC6-227ENST00000485102 BPIFA2Q96DR5 249 aa10.91□□□□□ -0.66
HDAC6-227ENST00000485102 TPD52L3Q96J77 140 aa10.91□□□□□ -0.66
HDAC6-227ENST00000485102 KRCC1Q9NPI7 259 aaPredicted RBP10.91□□□□□ -0.66
HDAC6-227ENST00000485102 MIOXQ9UGB7 285 aa10.91□□□□□ -0.66
HDAC6-227ENST00000485102 KIR2DS1A0A191URI9 304 aa10.9□□□□□ -0.66
HDAC6-227ENST00000485102 ARPC2O15144 300 aa10.9□□□□□ -0.66
HDAC6-227ENST00000485102 SCG5P05408 212 aa10.9□□□□□ -0.66
HDAC6-227ENST00000485102 MMP16P51512 607 aa10.9□□□□□ -0.66
HDAC6-227ENST00000485102 ST3GAL3Q11203 375 aa10.9□□□□□ -0.66
HDAC6-227ENST00000485102 FLOT2Q14254 428 aa10.9□□□□□ -0.66
HDAC6-227ENST00000485102 ZSCAN26Q16670 478 aa10.9□□□□□ -0.66
HDAC6-227ENST00000485102 PGM2L1Q6PCE3 622 aa10.9□□□□□ -0.66
HDAC6-227ENST00000485102 PYURFQ96I23 114 aa10.9□□□□□ -0.66
HDAC6-227ENST00000485102 OR2V2Q96R30 315 aa10.9□□□□□ -0.66
HDAC6-227ENST00000485102 SSBP3Q9BWW4 388 aaPredicted RBP10.9□□□□□ -0.66
HDAC6-227ENST00000485102 POFUT1Q9H488 388 aa10.9□□□□□ -0.66
HDAC6-227ENST00000485102 ANKRD19PQ9H560 264 aa10.9□□□□□ -0.66
HDAC6-227ENST00000485102 ATPIF1Q9UII2 106 aa10.9□□□□□ -0.66
HDAC6-227ENST00000485102 STARD10Q9Y365 291 aa10.9□□□□□ -0.66
HDAC6-227ENST00000485102 IGHV2-70DA0A0C4DH43 119 aa10.89□□□□□ -0.67
HDAC6-227ENST00000485102 A0A1B0GWJ7 208 aa10.89□□□□□ -0.67
HDAC6-227ENST00000485102 SGCEO43556 437 aa10.89□□□□□ -0.67
HDAC6-227ENST00000485102 TNFRSF1BP20333 461 aa10.89□□□□□ -0.67
HDAC6-227ENST00000485102 MDKP21741 143 aaPredicted RBP10.89□□□□□ -0.67
HDAC6-227ENST00000485102 SLC9A3P48764 834 aa10.89□□□□□ -0.67
HDAC6-227ENST00000485102 HNRNPA0Q13151 305 aaKnown RBP10.89□□□□□ -0.67
HDAC6-227ENST00000485102 TOP3AQ13472 1001 aaPredicted RBP10.89□□□□□ -0.67
HDAC6-227ENST00000485102 MIDNQ504T8 468 aa10.89□□□□□ -0.67
HDAC6-227ENST00000485102 FBXW12Q6X9E4 464 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms