RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 SP140LQ9H930 580 aa7.82□□□□□ -1.16
CDC42SE1-204ENST00000483763 GLTPQ9NZD2 209 aa7.82□□□□□ -1.16
CDC42SE1-204ENST00000483763 CSAG2Q9Y5P2 127 aa7.82□□□□□ -1.16
CDC42SE1-204ENST00000483763 ARGFXA6NJG6 315 aa7.82□□□□□ -1.16
CDC42SE1-204ENST00000483763 HSPB2A8KAH6 182 aa7.82□□□□□ -1.16
CDC42SE1-204ENST00000483763 FAM166BA8MTA8 275 aa7.82□□□□□ -1.16
CDC42SE1-204ENST00000483763 NPIPA2E9PIF3 369 aa7.82□□□□□ -1.16
CDC42SE1-204ENST00000483763 NPIPA3F8WFD2 350 aa7.82□□□□□ -1.16
CDC42SE1-204ENST00000483763 AIPO00170 330 aa7.82□□□□□ -1.16
CDC42SE1-204ENST00000483763 SLC19A2O60779 497 aa7.82□□□□□ -1.16
CDC42SE1-204ENST00000483763 MAGEA5P43359 124 aa7.82□□□□□ -1.16
CDC42SE1-204ENST00000483763 EIF2B2P49770 351 aaKnown RBP7.82□□□□□ -1.16
CDC42SE1-204ENST00000483763 PLA2G7Q13093 441 aa7.82□□□□□ -1.16
CDC42SE1-204ENST00000483763 POU4F3Q15319 338 aa7.82□□□□□ -1.16
CDC42SE1-204ENST00000483763 HSPB2Q16082 182 aa7.82□□□□□ -1.16
CDC42SE1-204ENST00000483763 GALNTL5Q7Z4T8 443 aa7.82□□□□□ -1.16
CDC42SE1-204ENST00000483763 GALNT16Q8N428 558 aa7.82□□□□□ -1.16
CDC42SE1-204ENST00000483763 MINDY2Q8NBR6 621 aa7.82□□□□□ -1.16
CDC42SE1-204ENST00000483763 HAVCR2Q8TDQ0 301 aa7.82□□□□□ -1.16
CDC42SE1-204ENST00000483763 KCNJ15Q99712 375 aa7.82□□□□□ -1.16
CDC42SE1-204ENST00000483763 FAM173AQ9BQD7 235 aa7.82□□□□□ -1.16
CDC42SE1-204ENST00000483763 C11orf54Q9H0W9 315 aaPredicted RBP7.82□□□□□ -1.16
CDC42SE1-204ENST00000483763 LIN7BQ9HAP6 207 aa7.82□□□□□ -1.16
CDC42SE1-204ENST00000483763 TCF7L1Q9HCS4 588 aa7.82□□□□□ -1.16
CDC42SE1-204ENST00000483763 PNRC2Q9NPJ4 139 aaKnown RBP7.82□□□□□ -1.16
CDC42SE1-204ENST00000483763 FAM206AQ9NX38 181 aa7.82□□□□□ -1.16
CDC42SE1-204ENST00000483763 R4GMQ9 66 aa7.82□□□□□ -1.16
CDC42SE1-204ENST00000483763 V9GY05 133 aa7.82□□□□□ -1.16
CDC42SE1-204ENST00000483763 ARPC4-TTLL3A0A0A6YYG9 625 aa7.81□□□□□ -1.16
CDC42SE1-204ENST00000483763 ZNF716A6NP11 495 aa7.81□□□□□ -1.16
CDC42SE1-204ENST00000483763 ICMTO60725 284 aa7.81□□□□□ -1.16
CDC42SE1-204ENST00000483763 VAMP5O95183 116 aa7.81□□□□□ -1.16
CDC42SE1-204ENST00000483763 LIPCP11150 499 aa7.81□□□□□ -1.16
CDC42SE1-204ENST00000483763 RIN1Q13671 783 aa7.81□□□□□ -1.16
CDC42SE1-204ENST00000483763 METAP1DQ6UB28 335 aaPredicted RBP7.81□□□□□ -1.16
CDC42SE1-204ENST00000483763 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.81□□□□□ -1.16
CDC42SE1-204ENST00000483763 OR10H5Q8NGA6 315 aa7.81□□□□□ -1.16
CDC42SE1-204ENST00000483763 ABHD3Q8WU67 409 aa7.81□□□□□ -1.16
CDC42SE1-204ENST00000483763 KCNE4Q8WWG9 221 aa7.81□□□□□ -1.16
CDC42SE1-204ENST00000483763 SLC25A38Q96DW6 304 aa7.81□□□□□ -1.16
CDC42SE1-204ENST00000483763 FER1L6-AS2Q96M78 137 aa7.81□□□□□ -1.16
CDC42SE1-204ENST00000483763 SOX7Q9BT81 388 aa7.81□□□□□ -1.16
CDC42SE1-204ENST00000483763 ZNF416Q9BWM5 594 aa7.81□□□□□ -1.16
CDC42SE1-204ENST00000483763 TTTY12Q9BZ98 90 aa7.81□□□□□ -1.16
CDC42SE1-204ENST00000483763 OR2B2Q9GZK3 357 aa7.81□□□□□ -1.16
CDC42SE1-204ENST00000483763 C1orf198Q9H425 327 aa7.81□□□□□ -1.16
CDC42SE1-204ENST00000483763 DDX28Q9NUL7 540 aaKnown RBP7.81□□□□□ -1.16
CDC42SE1-204ENST00000483763 ZNF319Q9P2F9 582 aa7.81□□□□□ -1.16
CDC42SE1-204ENST00000483763 FOXD3Q9UJU5 478 aaPredicted RBP7.81□□□□□ -1.16
CDC42SE1-204ENST00000483763 OR52A1Q9UKL2 312 aa7.81□□□□□ -1.16
CDC42SE1-204ENST00000483763 SPATA2Q9UM82 520 aa7.81□□□□□ -1.16
CDC42SE1-204ENST00000483763 MRPS18CQ9Y3D5 142 aaKnown RBP7.81□□□□□ -1.16
CDC42SE1-204ENST00000483763 PCDHGA9Q9Y5G4 932 aaKnown RBP7.81□□□□□ -1.16
CDC42SE1-204ENST00000483763 KMT2BQ9UMN6 2715 aaPredicted RBP7.81□□□□□ -1.16
CDC42SE1-204ENST00000483763 KALRNO60229 2985 aa7.81□□□□□ -1.16
CDC42SE1-204ENST00000483763 BSNQ9UPA5 3926 aa7.81□□□□□ -1.16
CDC42SE1-204ENST00000483763 GJE1A6NN92 205 aa7.81□□□□□ -1.16
CDC42SE1-204ENST00000483763 RAF1P04049 648 aa7.81□□□□□ -1.16
CDC42SE1-204ENST00000483763 ITGB2P05107 769 aa7.81□□□□□ -1.16
CDC42SE1-204ENST00000483763 H2BFMP0C1H6 154 aa7.81□□□□□ -1.16
CDC42SE1-204ENST00000483763 SLC2A1P11166 492 aa7.81□□□□□ -1.16
CDC42SE1-204ENST00000483763 POU3F2P20265 443 aaPredicted RBP7.81□□□□□ -1.16
CDC42SE1-204ENST00000483763 MAPK3P27361 379 aaPredicted RBP7.81□□□□□ -1.16
CDC42SE1-204ENST00000483763 CSNK1A1P48729 337 aa7.81□□□□□ -1.16
CDC42SE1-204ENST00000483763 PITPNBP48739 271 aa7.81□□□□□ -1.16
CDC42SE1-204ENST00000483763 MMP16P51512 607 aa7.81□□□□□ -1.16
CDC42SE1-204ENST00000483763 DEFA1P59665 94 aa7.81□□□□□ -1.16
CDC42SE1-204ENST00000483763 DEFA3P59666 94 aa7.81□□□□□ -1.16
CDC42SE1-204ENST00000483763 SCN1BQ07699 218 aa7.81□□□□□ -1.16
CDC42SE1-204ENST00000483763 AGAP7PQ5VUJ5 663 aa7.81□□□□□ -1.16
CDC42SE1-204ENST00000483763 MTFR2Q6P444 385 aa7.81□□□□□ -1.16
CDC42SE1-204ENST00000483763 DEGS2Q6QHC5 323 aa7.81□□□□□ -1.16
CDC42SE1-204ENST00000483763 FCRLAQ7L513 359 aa7.81□□□□□ -1.16
CDC42SE1-204ENST00000483763 GLCCI1Q86VQ1 547 aa7.81□□□□□ -1.16
CDC42SE1-204ENST00000483763 SERPINA12Q8IW75 414 aa7.81□□□□□ -1.16
CDC42SE1-204ENST00000483763 IZUMO1Q8IYV9 350 aa7.81□□□□□ -1.16
CDC42SE1-204ENST00000483763 CMTM4Q8IZR5 234 aa7.81□□□□□ -1.16
CDC42SE1-204ENST00000483763 TMEM251Q8N6I4 163 aa7.81□□□□□ -1.16
CDC42SE1-204ENST00000483763 MDS2Q8NDY4 140 aa7.81□□□□□ -1.16
CDC42SE1-204ENST00000483763 OR51A2Q8NGJ7 313 aa7.81□□□□□ -1.16
CDC42SE1-204ENST00000483763 OR6N1Q8NGY5 312 aa7.81□□□□□ -1.16
CDC42SE1-204ENST00000483763 ZNF671Q8TAW3 534 aa7.81□□□□□ -1.16
CDC42SE1-204ENST00000483763 TSEN15Q8WW01 171 aaKnown RBP7.81□□□□□ -1.16
CDC42SE1-204ENST00000483763 TMEM54Q969K7 222 aa7.81□□□□□ -1.16
CDC42SE1-204ENST00000483763 NABP1Q96AH0 204 aa7.81□□□□□ -1.16
CDC42SE1-204ENST00000483763 IP6K3Q96PC2 410 aa7.81□□□□□ -1.16
CDC42SE1-204ENST00000483763 ABRACLQ9P1F3 81 aa7.81□□□□□ -1.16
CDC42SE1-204ENST00000483763 OR5V1Q9UGF6 321 aa7.81□□□□□ -1.16
CDC42SE1-204ENST00000483763 BOKQ9UMX3 212 aaPredicted RBP7.81□□□□□ -1.16
CDC42SE1-204ENST00000483763 FLVCR1Q9Y5Y0 555 aa7.81□□□□□ -1.16
CDC42SE1-204ENST00000483763 C5orf63A6NC05 138 aa7.8□□□□□ -1.16
CDC42SE1-204ENST00000483763 E9PLN8 166 aa7.8□□□□□ -1.16
CDC42SE1-204ENST00000483763 P2RY10O00398 339 aa7.8□□□□□ -1.16
CDC42SE1-204ENST00000483763 HLA-DQB1P01920 261 aa7.8□□□□□ -1.16
CDC42SE1-204ENST00000483763 APOA1P02647 267 aa7.8□□□□□ -1.16
CDC42SE1-204ENST00000483763 TTRP02766 147 aa7.8□□□□□ -1.16
CDC42SE1-204ENST00000483763 ITGA5P08648 1049 aa7.8□□□□□ -1.16
CDC42SE1-204ENST00000483763 CASRP41180 1078 aa7.8□□□□□ -1.16
CDC42SE1-204ENST00000483763 LHX2P50458 406 aa7.8□□□□□ -1.16
CDC42SE1-204ENST00000483763 SRYQ05066 204 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms