RNA–Protein interactions for RNA: ENST00000482904.1

RHBDF1-208, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-208ENST00000482904 VNN3Q9NY84 501 aa20.01■□□□□ 0.79
RHBDF1-208ENST00000482904 TREM2Q9NZC2 230 aa20.01■□□□□ 0.79
RHBDF1-208ENST00000482904 PURGQ9UJV8 347 aaKnown RBP20.01■□□□□ 0.79
RHBDF1-208ENST00000482904 ZDHHC8Q9ULC8 765 aa20.01■□□□□ 0.79
RHBDF1-208ENST00000482904 CACNG2Q9Y698 323 aa20.01■□□□□ 0.79
RHBDF1-208ENST00000482904 B4DSR2 109 aa20■□□□□ 0.79
RHBDF1-208ENST00000482904 J3QW42 95 aa20■□□□□ 0.79
RHBDF1-208ENST00000482904 SOX14O95416 240 aa20■□□□□ 0.79
RHBDF1-208ENST00000482904 RAP2AP10114 183 aa20■□□□□ 0.79
RHBDF1-208ENST00000482904 COX10Q12887 443 aa20■□□□□ 0.79
RHBDF1-208ENST00000482904 MICAQ29983 383 aa20■□□□□ 0.79
RHBDF1-208ENST00000482904 ZNF770Q6IQ21 691 aaPredicted RBP20■□□□□ 0.79
RHBDF1-208ENST00000482904 ZBTB46Q86UZ6 589 aa20■□□□□ 0.79
RHBDF1-208ENST00000482904 CCL17Q92583 94 aa20■□□□□ 0.79
RHBDF1-208ENST00000482904 CMBLQ96DG6 245 aa20■□□□□ 0.79
RHBDF1-208ENST00000482904 PITX2Q99697 317 aa20■□□□□ 0.79
RHBDF1-208ENST00000482904 LPAR2Q9HBW0 351 aa20■□□□□ 0.79
RHBDF1-208ENST00000482904 STARD10Q9Y365 291 aa20■□□□□ 0.79
RHBDF1-208ENST00000482904 BHLHE40O14503 412 aa19.99■□□□□ 0.79
RHBDF1-208ENST00000482904 WNT9BO14905 357 aa19.99■□□□□ 0.79
RHBDF1-208ENST00000482904 PCMT1P22061 227 aa19.99■□□□□ 0.79
RHBDF1-208ENST00000482904 TNFSF4P23510 183 aa19.99■□□□□ 0.79
RHBDF1-208ENST00000482904 TNFAIP6P98066 277 aaPredicted RBP19.99■□□□□ 0.79
RHBDF1-208ENST00000482904 DNAL1Q4LDG9 190 aa19.99■□□□□ 0.79
RHBDF1-208ENST00000482904 GLCCI1Q86VQ1 547 aa19.99■□□□□ 0.79
RHBDF1-208ENST00000482904 CYB561A3Q8NBI2 242 aa19.99■□□□□ 0.79
RHBDF1-208ENST00000482904 OR5L1Q8NGL2 311 aa19.99■□□□□ 0.79
RHBDF1-208ENST00000482904 OR8D4Q8NGM9 314 aa19.99■□□□□ 0.79
RHBDF1-208ENST00000482904 OR2T4Q8NH00 348 aa19.99■□□□□ 0.79
RHBDF1-208ENST00000482904 APOBEC3DQ96AK3 386 aaPredicted RBP19.99■□□□□ 0.79
RHBDF1-208ENST00000482904 TSSK6Q9BXA6 273 aa19.99■□□□□ 0.79
RHBDF1-208ENST00000482904 IL20Q9NYY1 176 aa19.99■□□□□ 0.79
RHBDF1-208ENST00000482904 PTTG3PQ9NZH4 202 aa19.99■□□□□ 0.79
RHBDF1-208ENST00000482904 YLPM1P49750 1951 aaKnown RBP19.99■□□□□ 0.79
RHBDF1-208ENST00000482904 GYG2O15488 501 aa19.98■□□□□ 0.79
RHBDF1-208ENST00000482904 ADH4P08319 380 aa19.98■□□□□ 0.79
RHBDF1-208ENST00000482904 ZNF823P16415 610 aa19.98■□□□□ 0.79
RHBDF1-208ENST00000482904 PYCR1P32322 319 aa19.98■□□□□ 0.79
RHBDF1-208ENST00000482904 HIST1H3AP68431 136 aa19.98■□□□□ 0.79
RHBDF1-208ENST00000482904 HIST2H3PS2Q5TEC6 136 aa19.98■□□□□ 0.79
RHBDF1-208ENST00000482904 SLC18B1Q6NT16 456 aa19.98■□□□□ 0.79
RHBDF1-208ENST00000482904 CFAP77Q6ZQR2 320 aa19.98■□□□□ 0.79
RHBDF1-208ENST00000482904 HIST2H3AQ71DI3 136 aa19.98■□□□□ 0.79
RHBDF1-208ENST00000482904 OR2Z1Q8NG97 314 aa19.98■□□□□ 0.79
RHBDF1-208ENST00000482904 OR10G2Q8NGC3 310 aa19.98■□□□□ 0.79
RHBDF1-208ENST00000482904 RAB1CQ92928 201 aa19.98■□□□□ 0.79
RHBDF1-208ENST00000482904 C1orf159Q96HA4 380 aa19.98■□□□□ 0.79
RHBDF1-208ENST00000482904 MDFIQ99750 246 aa19.98■□□□□ 0.79
RHBDF1-208ENST00000482904 ARMC1Q9NVT9 282 aa19.98■□□□□ 0.79
RHBDF1-208ENST00000482904 FAM53CQ9NYF3 392 aa19.98■□□□□ 0.79
RHBDF1-208ENST00000482904 WIPI2Q9Y4P8 454 aa19.98■□□□□ 0.79
RHBDF1-208ENST00000482904 ISPDA4D126 451 aa19.97■□□□□ 0.79
RHBDF1-208ENST00000482904 GNGT2O14610 69 aa19.97■□□□□ 0.79
RHBDF1-208ENST00000482904 UBOX5O94941 541 aa19.97■□□□□ 0.79
RHBDF1-208ENST00000482904 CST1P01037 141 aa19.97■□□□□ 0.79
RHBDF1-208ENST00000482904 CD55P08174 381 aa19.97■□□□□ 0.79
RHBDF1-208ENST00000482904 KITLGP21583 273 aa19.97■□□□□ 0.79
RHBDF1-208ENST00000482904 DVL1P1P54792 670 aaPredicted RBP19.97■□□□□ 0.79
RHBDF1-208ENST00000482904 SLC3A1Q07837 685 aa19.97■□□□□ 0.79
RHBDF1-208ENST00000482904 TRAP1Q12931 704 aaKnown RBP19.97■□□□□ 0.79
RHBDF1-208ENST00000482904 OR2T33Q8NG76 320 aa19.97■□□□□ 0.79
RHBDF1-208ENST00000482904 OR51F2Q8NH61 342 aa19.97■□□□□ 0.79
RHBDF1-208ENST00000482904 RAB39BQ96DA2 213 aa19.97■□□□□ 0.79
RHBDF1-208ENST00000482904 ATF6BQ99941 703 aa19.97■□□□□ 0.79
RHBDF1-208ENST00000482904 CHID1Q9BWS9 393 aa19.97■□□□□ 0.79
RHBDF1-208ENST00000482904 DGCR6LQ9BY27 220 aa19.97■□□□□ 0.79
RHBDF1-208ENST00000482904 KCNG2Q9UJ96 466 aa19.97■□□□□ 0.79
RHBDF1-208ENST00000482904 BAIAP2Q9UQB8 552 aa19.97■□□□□ 0.79
RHBDF1-208ENST00000482904 DHRS12A0PJE2 317 aa19.96■□□□□ 0.79
RHBDF1-208ENST00000482904 FAM157AC9JC47 383 aa19.96■□□□□ 0.79
RHBDF1-208ENST00000482904 ACOT8O14734 319 aa19.96■□□□□ 0.79
RHBDF1-208ENST00000482904 MSMBP08118 114 aa19.96■□□□□ 0.79
RHBDF1-208ENST00000482904 RAC2P15153 192 aa19.96■□□□□ 0.79
RHBDF1-208ENST00000482904 SRP14P37108 136 aaKnown RBP19.96■□□□□ 0.79
RHBDF1-208ENST00000482904 ERFP50548 548 aa19.96■□□□□ 0.79
RHBDF1-208ENST00000482904 ECH1Q13011 328 aa19.96■□□□□ 0.79
RHBDF1-208ENST00000482904 FLOT2Q14254 428 aa19.96■□□□□ 0.79
RHBDF1-208ENST00000482904 GK3PQ14409 553 aa19.96■□□□□ 0.79
RHBDF1-208ENST00000482904 HLXQ14774 488 aaPredicted RBP19.96■□□□□ 0.79
RHBDF1-208ENST00000482904 PEG10Q86TG7 708 aaKnown RBP19.96■□□□□ 0.79
RHBDF1-208ENST00000482904 ADGRG5Q8IZF4 528 aa19.96■□□□□ 0.79
RHBDF1-208ENST00000482904 OR5AS1Q8N127 324 aa19.96■□□□□ 0.79
RHBDF1-208ENST00000482904 SLC37A3Q8NCC5 494 aa19.96■□□□□ 0.79
RHBDF1-208ENST00000482904 OR9Q1Q8NGQ5 310 aa19.96■□□□□ 0.79
RHBDF1-208ENST00000482904 TEX47Q8TBZ9 253 aa19.96■□□□□ 0.79
RHBDF1-208ENST00000482904 PTP4A1Q93096 173 aa19.96■□□□□ 0.79
RHBDF1-208ENST00000482904 HAVCR1Q96D42 359 aa19.96■□□□□ 0.79
RHBDF1-208ENST00000482904 ZNF665Q9H7R5 613 aa19.96■□□□□ 0.79
RHBDF1-208ENST00000482904 CYB5R1Q9UHQ9 305 aa19.96■□□□□ 0.79
RHBDF1-208ENST00000482904 TMEFF2Q9UIK5 374 aaPredicted RBP19.96■□□□□ 0.79
RHBDF1-208ENST00000482904 KLHL21Q9UJP4 597 aa19.96■□□□□ 0.79
RHBDF1-208ENST00000482904 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP19.95■□□□□ 0.78
RHBDF1-208ENST00000482904 AQP12BA6NM10 295 aa19.95■□□□□ 0.78
RHBDF1-208ENST00000482904 F5H5K5 113 aa19.95■□□□□ 0.78
RHBDF1-208ENST00000482904 IFNGP01579 166 aa19.95■□□□□ 0.78
RHBDF1-208ENST00000482904 GGT2P36268 569 aa19.95■□□□□ 0.78
RHBDF1-208ENST00000482904 CRMP1Q14194 572 aa19.95■□□□□ 0.78
RHBDF1-208ENST00000482904 ZNF771Q7L3S4 317 aaPredicted RBP19.95■□□□□ 0.78
RHBDF1-208ENST00000482904 SPATA24Q86W54 205 aa19.95■□□□□ 0.78
RHBDF1-208ENST00000482904 AQP12AQ8IXF9 295 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms