RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-215ENST00000482714 APEX1P27695 318 aaKnown RBP13.29□□□□□ -0.28
CCM2-215ENST00000482714 RPS27P42677 84 aaKnown RBP13.29□□□□□ -0.28
CCM2-215ENST00000482714 RAD52P43351 418 aa13.29□□□□□ -0.28
CCM2-215ENST00000482714 HTR5AP47898 357 aa13.29□□□□□ -0.28
CCM2-215ENST00000482714 RGS6P49758 472 aa13.29□□□□□ -0.28
CCM2-215ENST00000482714 TPTEP56180 551 aa13.29□□□□□ -0.28
CCM2-215ENST00000482714 BSPH1Q075Z2 132 aa13.29□□□□□ -0.28
CCM2-215ENST00000482714 TAF13Q15543 124 aa13.29□□□□□ -0.28
CCM2-215ENST00000482714 SMN1Q16637 294 aaKnown RBP13.29□□□□□ -0.28
CCM2-215ENST00000482714 RBM48Q5RL73 367 aaKnown RBP13.29□□□□□ -0.28
CCM2-215ENST00000482714 LAIR2Q6ISS4 152 aa13.29□□□□□ -0.28
CCM2-215ENST00000482714 PLEKHG7Q6ZR37 379 aa13.29□□□□□ -0.28
CCM2-215ENST00000482714 ZNF679Q8IYX0 411 aa13.29□□□□□ -0.28
CCM2-215ENST00000482714 BPIFB6Q8NFQ5 453 aa13.29□□□□□ -0.28
CCM2-215ENST00000482714 GGHQ92820 318 aa13.29□□□□□ -0.28
CCM2-215ENST00000482714 CNBD2Q96M20 576 aa13.29□□□□□ -0.28
CCM2-215ENST00000482714 ELOVL3Q9HB03 270 aa13.29□□□□□ -0.28
CCM2-215ENST00000482714 CDH20Q9HBT6 801 aa13.29□□□□□ -0.28
CCM2-215ENST00000482714 CENPMQ9NSP4 180 aa13.29□□□□□ -0.28
CCM2-215ENST00000482714 PSORS1C1Q9UIG5 152 aa13.29□□□□□ -0.28
CCM2-215ENST00000482714 BLOC1S6Q9UL45 172 aa13.29□□□□□ -0.28
CCM2-215ENST00000482714 CADP27708 2225 aa13.29□□□□□ -0.28
CCM2-215ENST00000482714 ABCA4P78363 2273 aa13.29□□□□□ -0.28
CCM2-215ENST00000482714 LOC100509620A0A075B734 347 aa13.29□□□□□ -0.28
CCM2-215ENST00000482714 ACOD1A6NK06 481 aa13.29□□□□□ -0.28
CCM2-215ENST00000482714 ABCD4O14678 606 aa13.29□□□□□ -0.28
CCM2-215ENST00000482714 MRPL3P09001 348 aaKnown RBP13.29□□□□□ -0.28
CCM2-215ENST00000482714 TACSTD2P09758 323 aa13.29□□□□□ -0.28
CCM2-215ENST00000482714 LOXP28300 417 aaPredicted RBP13.29□□□□□ -0.28
CCM2-215ENST00000482714 OPRL1P41146 370 aa13.29□□□□□ -0.28
CCM2-215ENST00000482714 GALK2Q01415 458 aa13.29□□□□□ -0.28
CCM2-215ENST00000482714 RSPO1Q2MKA7 263 aaPredicted RBP13.29□□□□□ -0.28
CCM2-215ENST00000482714 RNLSQ5VYX0 342 aa13.29□□□□□ -0.28
CCM2-215ENST00000482714 OTPQ5XKR4 325 aa13.29□□□□□ -0.28
CCM2-215ENST00000482714 TMEM154Q6P9G4 183 aa13.29□□□□□ -0.28
CCM2-215ENST00000482714 ZNF322Q6U7Q0 402 aaPredicted RBP13.29□□□□□ -0.28
CCM2-215ENST00000482714 DRAM2Q6UX65 266 aa13.29□□□□□ -0.28
CCM2-215ENST00000482714 KRT77Q7Z794 578 aa13.29□□□□□ -0.28
CCM2-215ENST00000482714 NUP37Q8NFH4 326 aa13.29□□□□□ -0.28
CCM2-215ENST00000482714 OR10H4Q8NGA5 316 aa13.29□□□□□ -0.28
CCM2-215ENST00000482714 OR52I1Q8NGK6 324 aa13.29□□□□□ -0.28
CCM2-215ENST00000482714 OR10S1Q8NGN2 331 aa13.29□□□□□ -0.28
CCM2-215ENST00000482714 HAVCR2Q8TDQ0 301 aa13.29□□□□□ -0.28
CCM2-215ENST00000482714 TMEM80Q96HE8 168 aa13.29□□□□□ -0.28
CCM2-215ENST00000482714 MS4A3Q96HJ5 214 aa13.29□□□□□ -0.28
CCM2-215ENST00000482714 C4orf45Q96LM5 186 aa13.29□□□□□ -0.28
CCM2-215ENST00000482714 OR8B4Q96RC9 309 aa13.29□□□□□ -0.28
CCM2-215ENST00000482714 BCL2L14Q9BZR8 327 aa13.29□□□□□ -0.28
CCM2-215ENST00000482714 FKBP14Q9NWM8 211 aa13.29□□□□□ -0.28
CCM2-215ENST00000482714 DIMT1Q9UNQ2 313 aaKnown RBP13.29□□□□□ -0.28
CCM2-215ENST00000482714 RNF115Q9Y4L5 304 aa13.29□□□□□ -0.28
CCM2-215ENST00000482714 UNC79Q9P2D8 2635 aa13.28□□□□□ -0.28
CCM2-215ENST00000482714 NAV2Q8IVL1 2488 aa13.28□□□□□ -0.28
CCM2-215ENST00000482714 IGHV2OR16-5A0A0B4J2B6 119 aa13.28□□□□□ -0.28
CCM2-215ENST00000482714 A0A1W2PQL4 384 aaPredicted RBP13.28□□□□□ -0.28
CCM2-215ENST00000482714 DAPL1A0PJW8 107 aa13.28□□□□□ -0.28
CCM2-215ENST00000482714 C5orf49A4QMS7 147 aa13.28□□□□□ -0.28
CCM2-215ENST00000482714 CTAG2O75638 210 aa13.28□□□□□ -0.28
CCM2-215ENST00000482714 CELA3BP08861 270 aa13.28□□□□□ -0.28
CCM2-215ENST00000482714 H2BFMP0C1H6 154 aa13.28□□□□□ -0.28
CCM2-215ENST00000482714 NR4A1P22736 598 aa13.28□□□□□ -0.28
CCM2-215ENST00000482714 SSTR2P30874 369 aa13.28□□□□□ -0.28
CCM2-215ENST00000482714 GLRXP35754 106 aa13.28□□□□□ -0.28
CCM2-215ENST00000482714 HCCSP53701 268 aa13.28□□□□□ -0.28
CCM2-215ENST00000482714 UCP2P55851 309 aa13.28□□□□□ -0.28
CCM2-215ENST00000482714 ZNF540Q8NDQ6 660 aa13.28□□□□□ -0.28
CCM2-215ENST00000482714 MYDGFQ969H8 173 aa13.28□□□□□ -0.28
CCM2-215ENST00000482714 ITFG2Q969R8 447 aa13.28□□□□□ -0.28
CCM2-215ENST00000482714 PIK3IP1Q96FE7 263 aa13.28□□□□□ -0.28
CCM2-215ENST00000482714 COPS4Q9BT78 406 aa13.28□□□□□ -0.28
CCM2-215ENST00000482714 DUSP21Q9H596 190 aa13.28□□□□□ -0.28
CCM2-215ENST00000482714 CHCHD3Q9NX63 227 aaKnown RBP13.28□□□□□ -0.28
CCM2-215ENST00000482714 EXOSC1Q9Y3B2 195 aaKnown RBP13.28□□□□□ -0.28
CCM2-215ENST00000482714 NBPF19A0A087WUL8 3843 aa13.27□□□□□ -0.28
CCM2-215ENST00000482714 SLC1A7O00341 560 aa13.27□□□□□ -0.29
CCM2-215ENST00000482714 SIAH2O43255 324 aa13.27□□□□□ -0.29
CCM2-215ENST00000482714 MRPS14O60783 128 aaKnown RBP13.27□□□□□ -0.29
CCM2-215ENST00000482714 FAM20BO75063 409 aa13.27□□□□□ -0.29
CCM2-215ENST00000482714 KRT8P05787 483 aa13.27□□□□□ -0.29
CCM2-215ENST00000482714 PSKH1P11801 424 aa13.27□□□□□ -0.29
CCM2-215ENST00000482714 ACTA2P62736 377 aa13.27□□□□□ -0.29
CCM2-215ENST00000482714 ACTG2P63267 376 aa13.27□□□□□ -0.29
CCM2-215ENST00000482714 ST3GAL4Q11206 333 aa13.27□□□□□ -0.29
CCM2-215ENST00000482714 MRPL28Q13084 256 aaKnown RBP13.27□□□□□ -0.29
CCM2-215ENST00000482714 GALEQ14376 348 aa13.27□□□□□ -0.29
CCM2-215ENST00000482714 ZNF684Q5T5D7 378 aa13.27□□□□□ -0.29
CCM2-215ENST00000482714 SLC22A25Q6T423 547 aa13.27□□□□□ -0.29
CCM2-215ENST00000482714 COLCA1Q6ZS62 124 aa13.27□□□□□ -0.29
CCM2-215ENST00000482714 SYS1Q8N2H4 156 aa13.27□□□□□ -0.29
CCM2-215ENST00000482714 PIAS4Q8N2W9 510 aaPredicted RBP13.27□□□□□ -0.29
CCM2-215ENST00000482714 OR5L1Q8NGL2 311 aa13.27□□□□□ -0.29
CCM2-215ENST00000482714 SNX33Q8WV41 574 aa13.27□□□□□ -0.29
CCM2-215ENST00000482714 COPS3Q9UNS2 423 aa13.27□□□□□ -0.29
CCM2-215ENST00000482714 MYRFQ9Y2G1 1151 aa13.27□□□□□ -0.29
CCM2-215ENST00000482714 METTL15A6NJ78 407 aa13.26□□□□□ -0.29
CCM2-215ENST00000482714 F5H5K5 113 aa13.26□□□□□ -0.29
CCM2-215ENST00000482714 XPNPEP2O43895 674 aa13.26□□□□□ -0.29
CCM2-215ENST00000482714 ACSM4P0C7M7 580 aa13.26□□□□□ -0.29
CCM2-215ENST00000482714 MYL12AP19105 171 aa13.26□□□□□ -0.29
CCM2-215ENST00000482714 CCNOP22674 350 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms