RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 GCH1P30793 250 aa17.95■□□□□ 0.46
SEC13-217ENST00000482647 RPS27P42677 84 aaKnown RBP17.95■□□□□ 0.46
SEC13-217ENST00000482647 RGS6P49758 472 aa17.95■□□□□ 0.46
SEC13-217ENST00000482647 RPS7P62081 194 aaKnown RBP17.95■□□□□ 0.46
SEC13-217ENST00000482647 PPP1CBP62140 327 aa17.95■□□□□ 0.46
SEC13-217ENST00000482647 SLC35D3Q5M8T2 416 aa17.95■□□□□ 0.46
SEC13-217ENST00000482647 SPATA46Q5T0L3 261 aa17.95■□□□□ 0.46
SEC13-217ENST00000482647 C12orf73Q69YU5 71 aa17.95■□□□□ 0.46
SEC13-217ENST00000482647 RFPL4BQ6ZWI9 263 aa17.95■□□□□ 0.46
SEC13-217ENST00000482647 DCXRQ7Z4W1 244 aa17.95■□□□□ 0.46
SEC13-217ENST00000482647 ERI1Q8IV48 349 aaKnown RBP17.95■□□□□ 0.46
SEC13-217ENST00000482647 SLC25A40Q8TBP6 338 aa17.95■□□□□ 0.46
SEC13-217ENST00000482647 MARS2Q96GW9 593 aaKnown RBP17.95■□□□□ 0.46
SEC13-217ENST00000482647 COG8Q96MW5 612 aa17.95■□□□□ 0.46
SEC13-217ENST00000482647 INTS14Q96SY0 518 aa17.95■□□□□ 0.46
SEC13-217ENST00000482647 MS4A5Q9H3V2 200 aa17.95■□□□□ 0.46
SEC13-217ENST00000482647 MARCH7Q9H992 704 aa17.95■□□□□ 0.46
SEC13-217ENST00000482647 PNRC2Q9NPJ4 139 aaKnown RBP17.95■□□□□ 0.46
SEC13-217ENST00000482647 ANKRD65E5RJM6 399 aa17.94■□□□□ 0.46
SEC13-217ENST00000482647 EI24O14681 340 aa17.94■□□□□ 0.46
SEC13-217ENST00000482647 PRKYO43930 277 aa17.94■□□□□ 0.46
SEC13-217ENST00000482647 SSX4O60224 188 aa17.94■□□□□ 0.46
SEC13-217ENST00000482647 DBHP09172 617 aa17.94■□□□□ 0.46
SEC13-217ENST00000482647 POLR2IP36954 125 aaKnown RBP17.94■□□□□ 0.46
SEC13-217ENST00000482647 NUDT6P53370 316 aa17.94■□□□□ 0.46
SEC13-217ENST00000482647 RAD23AP54725 363 aa17.94■□□□□ 0.46
SEC13-217ENST00000482647 CLEC12BQ2HXU8 276 aa17.94■□□□□ 0.46
SEC13-217ENST00000482647 BBS1Q8NFJ9 593 aa17.94■□□□□ 0.46
SEC13-217ENST00000482647 KLF14Q8TD94 323 aaPredicted RBP17.94■□□□□ 0.46
SEC13-217ENST00000482647 SPTSSAQ969W0 71 aa17.94■□□□□ 0.46
SEC13-217ENST00000482647 ZMYND19Q96E35 227 aaPredicted RBP17.94■□□□□ 0.46
SEC13-217ENST00000482647 Q96MF0 132 aa17.94■□□□□ 0.46
SEC13-217ENST00000482647 OR2J1Q9GZK6 312 aa17.94■□□□□ 0.46
SEC13-217ENST00000482647 IGLV3-9A0A075B6K5 115 aa17.93■□□□□ 0.46
SEC13-217ENST00000482647 F5H5K5 113 aa17.93■□□□□ 0.46
SEC13-217ENST00000482647 H3BSA7 217 aa17.93■□□□□ 0.46
SEC13-217ENST00000482647 J3QW42 95 aa17.93■□□□□ 0.46
SEC13-217ENST00000482647 CLPTM1O96005 669 aa17.93■□□□□ 0.46
SEC13-217ENST00000482647 IGHV3-13P01766 116 aa17.93■□□□□ 0.46
SEC13-217ENST00000482647 SLC2A5P22732 501 aa17.93■□□□□ 0.46
SEC13-217ENST00000482647 ALDH3B1P43353 468 aa17.93■□□□□ 0.46
SEC13-217ENST00000482647 EFNB1P98172 346 aa17.93■□□□□ 0.46
SEC13-217ENST00000482647 NKPD1Q17RQ9 610 aa17.93■□□□□ 0.46
SEC13-217ENST00000482647 RSPO1Q2MKA7 263 aaPredicted RBP17.93■□□□□ 0.46
SEC13-217ENST00000482647 KRTAP27-1Q3LI81 207 aa17.93■□□□□ 0.46
SEC13-217ENST00000482647 MBNL2Q5VZF2 373 aaKnown RBP17.93■□□□□ 0.46
SEC13-217ENST00000482647 ZBTB49Q6ZSB9 765 aa17.93■□□□□ 0.46
SEC13-217ENST00000482647 SHFQ7M4L6 423 aa17.93■□□□□ 0.46
SEC13-217ENST00000482647 TCEANCQ8N8B7 351 aa17.93■□□□□ 0.46
SEC13-217ENST00000482647 OR5L1Q8NGL2 311 aa17.93■□□□□ 0.46
SEC13-217ENST00000482647 OR6N2Q8NGY6 317 aa17.93■□□□□ 0.46
SEC13-217ENST00000482647 TMEM163Q8TC26 289 aa17.93■□□□□ 0.46
SEC13-217ENST00000482647 EME1Q96AY2 570 aa17.93■□□□□ 0.46
SEC13-217ENST00000482647 H2AFY2Q9P0M6 372 aaPredicted RBP17.93■□□□□ 0.46
SEC13-217ENST00000482647 TAAR3PQ9P1P4 343 aa17.93■□□□□ 0.46
SEC13-217ENST00000482647 MYEF2Q9P2K5 600 aaKnown RBP17.93■□□□□ 0.46
SEC13-217ENST00000482647 MT-ND5P03915 603 aa17.92■□□□□ 0.46
SEC13-217ENST00000482647 PSKH1P11801 424 aa17.92■□□□□ 0.46
SEC13-217ENST00000482647 CD99P14209 185 aa17.92■□□□□ 0.46
SEC13-217ENST00000482647 TPTEP56180 551 aa17.92■□□□□ 0.46
SEC13-217ENST00000482647 DSCR9P59020 149 aa17.92■□□□□ 0.46
SEC13-217ENST00000482647 APOFQ13790 326 aa17.92■□□□□ 0.46
SEC13-217ENST00000482647 EIF2B1Q14232 305 aaKnown RBP17.92■□□□□ 0.46
SEC13-217ENST00000482647 TAF13Q15543 124 aa17.92■□□□□ 0.46
SEC13-217ENST00000482647 DPY19L4Q7Z388 723 aa17.92■□□□□ 0.46
SEC13-217ENST00000482647 TIGD4Q8IY51 512 aa17.92■□□□□ 0.46
SEC13-217ENST00000482647 ZCCHC24Q8N2G6 241 aaKnown RBP17.92■□□□□ 0.46
SEC13-217ENST00000482647 OR10S1Q8NGN2 331 aa17.92■□□□□ 0.46
SEC13-217ENST00000482647 NEU4Q8WWR8 484 aaPredicted RBP17.92■□□□□ 0.46
SEC13-217ENST00000482647 APOBEC3DQ96AK3 386 aaPredicted RBP17.92■□□□□ 0.46
SEC13-217ENST00000482647 SLAMF6Q96DU3 332 aa17.92■□□□□ 0.46
SEC13-217ENST00000482647 SORCS2Q96PQ0 1159 aa17.92■□□□□ 0.46
SEC13-217ENST00000482647 TEAD3Q99594 435 aa17.92■□□□□ 0.46
SEC13-217ENST00000482647 TMUB1Q9BVT8 246 aa17.92■□□□□ 0.46
SEC13-217ENST00000482647 DDX28Q9NUL7 540 aaKnown RBP17.92■□□□□ 0.46
SEC13-217ENST00000482647 STARD10Q9Y365 291 aa17.92■□□□□ 0.46
SEC13-217ENST00000482647 ACSM4P0C7M7 580 aa17.91■□□□□ 0.46
SEC13-217ENST00000482647 MAD2L1BPQ15013 274 aaPredicted RBP17.91■□□□□ 0.46
SEC13-217ENST00000482647 LCN1P1Q5VSP4 162 aa17.91■□□□□ 0.46
SEC13-217ENST00000482647 ZNF454Q8N9F8 522 aa17.91■□□□□ 0.46
SEC13-217ENST00000482647 ST7LQ8TDW4 575 aa17.91■□□□□ 0.46
SEC13-217ENST00000482647 SNX33Q8WV41 574 aa17.91■□□□□ 0.46
SEC13-217ENST00000482647 IL4I1Q96RQ9 567 aa17.91■□□□□ 0.46
SEC13-217ENST00000482647 COPS4Q9BT78 406 aa17.91■□□□□ 0.46
SEC13-217ENST00000482647 CENPMQ9NSP4 180 aa17.91■□□□□ 0.46
SEC13-217ENST00000482647 M0R129 80 aa17.9■□□□□ 0.46
SEC13-217ENST00000482647 NAT2P11245 290 aa17.9■□□□□ 0.46
SEC13-217ENST00000482647 MPV17P39210 176 aa17.9■□□□□ 0.46
SEC13-217ENST00000482647 SLC15A1P46059 708 aa17.9■□□□□ 0.46
SEC13-217ENST00000482647 CDC42P60953 191 aa17.9■□□□□ 0.46
SEC13-217ENST00000482647 ALKBH6Q3KRA9 238 aa17.9■□□□□ 0.46
SEC13-217ENST00000482647 AADACL4Q5VUY2 407 aa17.9■□□□□ 0.46
SEC13-217ENST00000482647 NXNL2Q5VZ03 156 aa17.9■□□□□ 0.46
SEC13-217ENST00000482647 CLEC2AQ6UVW9 174 aa17.9■□□□□ 0.46
SEC13-217ENST00000482647 MEPCEQ7L2J0 689 aaKnown RBP17.9■□□□□ 0.46
SEC13-217ENST00000482647 C1QTNF5Q9BXJ0 243 aa17.9■□□□□ 0.46
SEC13-217ENST00000482647 PLSCR5A0PG75 271 aa17.89■□□□□ 0.45
SEC13-217ENST00000482647 TRIM64A6NGJ6 449 aa17.89■□□□□ 0.45
SEC13-217ENST00000482647 ERICH4A6NGS2 130 aa17.89■□□□□ 0.45
SEC13-217ENST00000482647 TRIM64BA6NI03 449 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms