RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 SPATA46Q5T0L3 261 aa6.88□□□□□ -1.31
SNX13-208ENST00000482558 ZNF684Q5T5D7 378 aa6.88□□□□□ -1.31
SNX13-208ENST00000482558 LINC01590Q5TEZ4 76 aa6.88□□□□□ -1.31
SNX13-208ENST00000482558 EEF1A1P5Q5VTE0 462 aa6.88□□□□□ -1.31
SNX13-208ENST00000482558 RSBN1Q5VWQ0 802 aaPredicted RBP6.88□□□□□ -1.31
SNX13-208ENST00000482558 SLC22A10Q63ZE4 541 aa6.88□□□□□ -1.31
SNX13-208ENST00000482558 FAM90A2PQ658T7 463 aa6.88□□□□□ -1.31
SNX13-208ENST00000482558 KCTD18Q6PI47 426 aaPredicted RBP6.88□□□□□ -1.31
SNX13-208ENST00000482558 CRIP3Q6Q6R5 217 aa6.88□□□□□ -1.31
SNX13-208ENST00000482558 HDDC2Q7Z4H3 204 aa6.88□□□□□ -1.31
SNX13-208ENST00000482558 WDR5BQ86VZ2 330 aa6.88□□□□□ -1.31
SNX13-208ENST00000482558 C9orf40Q8IXQ3 194 aa6.88□□□□□ -1.31
SNX13-208ENST00000482558 DND1Q8IYX4 353 aaKnown RBP6.88□□□□□ -1.31
SNX13-208ENST00000482558 BATF2Q8N1L9 274 aa6.88□□□□□ -1.31
SNX13-208ENST00000482558 SAMD12Q8N8I0 201 aa6.88□□□□□ -1.31
SNX13-208ENST00000482558 EXD3Q8N9H8 876 aa6.88□□□□□ -1.31
SNX13-208ENST00000482558 OR5J2Q8NH18 312 aa6.88□□□□□ -1.31
SNX13-208ENST00000482558 TSLPQ969D9 159 aa6.88□□□□□ -1.31
SNX13-208ENST00000482558 RFT1Q96AA3 541 aa6.88□□□□□ -1.31
SNX13-208ENST00000482558 LPAR4Q99677 370 aa6.88□□□□□ -1.31
SNX13-208ENST00000482558 TPPP3Q9BW30 176 aa6.88□□□□□ -1.31
SNX13-208ENST00000482558 SSBP3Q9BWW4 388 aaPredicted RBP6.88□□□□□ -1.31
SNX13-208ENST00000482558 COMMD4Q9H0A8 199 aa6.88□□□□□ -1.31
SNX13-208ENST00000482558 OR10A2Q9H208 303 aa6.88□□□□□ -1.31
SNX13-208ENST00000482558 SLC26A1Q9H2B4 701 aa6.88□□□□□ -1.31
SNX13-208ENST00000482558 TXNIPQ9H3M7 391 aa6.88□□□□□ -1.31
SNX13-208ENST00000482558 KLHL1Q9NR64 748 aa6.88□□□□□ -1.31
SNX13-208ENST00000482558 INIPQ9NRY2 104 aa6.88□□□□□ -1.31
SNX13-208ENST00000482558 MRPL39Q9NYK5 338 aaKnown RBP6.88□□□□□ -1.31
SNX13-208ENST00000482558 FAM30AQ9NZY2 134 aa6.88□□□□□ -1.31
SNX13-208ENST00000482558 EMC3Q9P0I2 261 aa6.88□□□□□ -1.31
SNX13-208ENST00000482558 KIAA1456Q9P272 454 aa6.88□□□□□ -1.31
SNX13-208ENST00000482558 ABI3Q9P2A4 366 aa6.88□□□□□ -1.31
SNX13-208ENST00000482558 DHCR7Q9UBM7 475 aaKnown RBP6.88□□□□□ -1.31
SNX13-208ENST00000482558 STEAP1Q9UHE8 339 aa6.88□□□□□ -1.31
SNX13-208ENST00000482558 SPATA2Q9UM82 520 aa6.88□□□□□ -1.31
SNX13-208ENST00000482558 RASD1Q9Y272 281 aa6.88□□□□□ -1.31
SNX13-208ENST00000482558 ETV7Q9Y603 341 aa6.88□□□□□ -1.31
SNX13-208ENST00000482558 SIRT4Q9Y6E7 314 aaPredicted RBP6.88□□□□□ -1.31
SNX13-208ENST00000482558 SCN2AQ99250 2005 aa6.88□□□□□ -1.31
SNX13-208ENST00000482558 TMED7-TICAM2A0A0A6YYA0 188 aa6.87□□□□□ -1.31
SNX13-208ENST00000482558 A0A1W2PRG6 482 aa6.87□□□□□ -1.31
SNX13-208ENST00000482558 NAP1L6A6NFF2 107 aa6.87□□□□□ -1.31
SNX13-208ENST00000482558 NPIPB5A8MRT5 1133 aa6.87□□□□□ -1.31
SNX13-208ENST00000482558 A8MUA0 341 aa6.87□□□□□ -1.31
SNX13-208ENST00000482558 B4DXG7 233 aa6.87□□□□□ -1.31
SNX13-208ENST00000482558 USP17L23D6RBM5 183 aa6.87□□□□□ -1.31
SNX13-208ENST00000482558 LRRN3E7EW58 273 aa6.87□□□□□ -1.31
SNX13-208ENST00000482558 E9PI62 339 aa6.87□□□□□ -1.31
SNX13-208ENST00000482558 AIPO00170 330 aa6.87□□□□□ -1.31
SNX13-208ENST00000482558 ARHGEF9O43307 516 aa6.87□□□□□ -1.31
SNX13-208ENST00000482558 GSTZ1O43708 216 aaPredicted RBP6.87□□□□□ -1.31
SNX13-208ENST00000482558 FZD7O75084 574 aa6.87□□□□□ -1.31
SNX13-208ENST00000482558 NPIPB7O75200 414 aa6.87□□□□□ -1.31
SNX13-208ENST00000482558 ALOX12BO75342 701 aa6.87□□□□□ -1.31
SNX13-208ENST00000482558 NUDT14O95848 222 aa6.87□□□□□ -1.31
SNX13-208ENST00000482558 ECDO95905 644 aaPredicted RBP6.87□□□□□ -1.31
SNX13-208ENST00000482558 DHFRP00374 187 aa6.87□□□□□ -1.31
SNX13-208ENST00000482558 TFP02787 698 aa6.87□□□□□ -1.31
SNX13-208ENST00000482558 RLN1P04808 185 aa6.87□□□□□ -1.31
SNX13-208ENST00000482558 GYPBP06028 91 aa6.87□□□□□ -1.31
SNX13-208ENST00000482558 GIMD1P0DJR0 217 aa6.87□□□□□ -1.31
SNX13-208ENST00000482558 CLUP10909 449 aa6.87□□□□□ -1.31
SNX13-208ENST00000482558 MMP9P14780 707 aa6.87□□□□□ -1.31
SNX13-208ENST00000482558 AREGP15514 252 aa6.87□□□□□ -1.31
SNX13-208ENST00000482558 SPNP16150 400 aa6.87□□□□□ -1.31
SNX13-208ENST00000482558 ELK1P19419 428 aa6.87□□□□□ -1.31
SNX13-208ENST00000482558 SRMP19623 302 aa6.87□□□□□ -1.31
SNX13-208ENST00000482558 PTNP21246 168 aa6.87□□□□□ -1.31
SNX13-208ENST00000482558 BCKDHBP21953 392 aa6.87□□□□□ -1.31
SNX13-208ENST00000482558 ACVR1BP36896 505 aa6.87□□□□□ -1.31
SNX13-208ENST00000482558 MNDAP41218 407 aa6.87□□□□□ -1.31
SNX13-208ENST00000482558 CDKN2AP42771 156 aaKnown RBP6.87□□□□□ -1.31
SNX13-208ENST00000482558 DAP3P51398 398 aaKnown RBP6.87□□□□□ -1.31
SNX13-208ENST00000482558 ZNF134P52741 427 aa6.87□□□□□ -1.31
SNX13-208ENST00000482558 CLDN20P56880 219 aa6.87□□□□□ -1.31
SNX13-208ENST00000482558 FOXL2P58012 376 aa6.87□□□□□ -1.31
SNX13-208ENST00000482558 RPL27P61353 136 aaKnown RBP6.87□□□□□ -1.31
SNX13-208ENST00000482558 E2F1Q01094 437 aa6.87□□□□□ -1.31
SNX13-208ENST00000482558 CFHR1Q03591 330 aa6.87□□□□□ -1.31
SNX13-208ENST00000482558 EGR4Q05215 589 aa6.87□□□□□ -1.31
SNX13-208ENST00000482558 MZT1Q08AG7 82 aa6.87□□□□□ -1.31
SNX13-208ENST00000482558 DYRK1AQ13627 763 aa6.87□□□□□ -1.31
SNX13-208ENST00000482558 Q499Y3 187 aa6.87□□□□□ -1.31
SNX13-208ENST00000482558 NKAIN1Q4KMZ8 207 aa6.87□□□□□ -1.31
SNX13-208ENST00000482558 TP53I3Q53FA7 332 aa6.87□□□□□ -1.31
SNX13-208ENST00000482558 C1orf140Q5VVS0 124 aa6.87□□□□□ -1.31
SNX13-208ENST00000482558 FCRLBQ6BAA4 426 aa6.87□□□□□ -1.31
SNX13-208ENST00000482558 CBLN3Q6UW01 205 aa6.87□□□□□ -1.31
SNX13-208ENST00000482558 B3GLCTQ6Y288 498 aa6.87□□□□□ -1.31
SNX13-208ENST00000482558 CDC20BQ86Y33 519 aa6.87□□□□□ -1.31
SNX13-208ENST00000482558 Q8N1X5 172 aa6.87□□□□□ -1.31
SNX13-208ENST00000482558 LRRC17Q8N6Y2 441 aa6.87□□□□□ -1.31
SNX13-208ENST00000482558 C11orf44Q8N8P7 122 aa6.87□□□□□ -1.31
SNX13-208ENST00000482558 Q8N9G6 341 aaPredicted RBP6.87□□□□□ -1.31
SNX13-208ENST00000482558 OR5AK2Q8NH90 309 aa6.87□□□□□ -1.31
SNX13-208ENST00000482558 MFSD8Q8NHS3 518 aa6.87□□□□□ -1.31
SNX13-208ENST00000482558 MAFAQ8NHW3 353 aaPredicted RBP6.87□□□□□ -1.31
SNX13-208ENST00000482558 TRMT10AQ8TBZ6 339 aaKnown RBP6.87□□□□□ -1.31
SNX13-208ENST00000482558 SLC22A8Q8TCC7 542 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms