RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 DNAH2Q9P225 4427 aa9.48□□□□□ -0.89
USP11-208ENST00000480104 SLC2A10O95528 541 aa9.48□□□□□ -0.89
USP11-208ENST00000480104 PRPS1L1P21108 318 aa9.48□□□□□ -0.89
USP11-208ENST00000480104 RAB25P57735 213 aa9.48□□□□□ -0.89
USP11-208ENST00000480104 ELF3P78545 371 aaPredicted RBP9.48□□□□□ -0.89
USP11-208ENST00000480104 PDCD4Q53EL6 469 aaKnown RBP9.48□□□□□ -0.89
USP11-208ENST00000480104 CEP85LQ5SZL2 805 aa9.48□□□□□ -0.89
USP11-208ENST00000480104 C9orf66Q5T8R8 295 aa9.48□□□□□ -0.89
USP11-208ENST00000480104 COLCA1Q6ZS62 124 aa9.48□□□□□ -0.89
USP11-208ENST00000480104 CLDN22Q8N7P3 220 aa9.48□□□□□ -0.89
USP11-208ENST00000480104 AENQ8WTP8 325 aaKnown RBP9.48□□□□□ -0.89
USP11-208ENST00000480104 PTP4A1Q93096 173 aa9.48□□□□□ -0.89
USP11-208ENST00000480104 ERGIC1Q969X5 290 aa9.48□□□□□ -0.89
USP11-208ENST00000480104 DMRTB1Q96MA1 342 aa9.48□□□□□ -0.89
USP11-208ENST00000480104 ZNF582Q96NG8 517 aaPredicted RBP9.48□□□□□ -0.89
USP11-208ENST00000480104 DUX3Q96PT4 197 aa9.48□□□□□ -0.89
USP11-208ENST00000480104 EPYCQ99645 322 aa9.48□□□□□ -0.89
USP11-208ENST00000480104 METTL8Q9H825 291 aaKnown RBP9.48□□□□□ -0.89
USP11-208ENST00000480104 TRIM36Q9NQ86 728 aa9.48□□□□□ -0.89
USP11-208ENST00000480104 SCOCQ9UIL1 159 aa9.48□□□□□ -0.89
USP11-208ENST00000480104 SNX12Q9UMY4 172 aa9.48□□□□□ -0.89
USP11-208ENST00000480104 VGLL3A8MV65 326 aa9.47□□□□□ -0.89
USP11-208ENST00000480104 PRR23D1E9PI22 279 aaPredicted RBP9.47□□□□□ -0.89
USP11-208ENST00000480104 RNASET2O00584 256 aaKnown RBP9.47□□□□□ -0.89
USP11-208ENST00000480104 CPSF4O95639 269 aaKnown RBP9.47□□□□□ -0.89
USP11-208ENST00000480104 PRR23D2P0DMB1 279 aaPredicted RBP9.47□□□□□ -0.89
USP11-208ENST00000480104 MED14OSP0DP75 135 aa9.47□□□□□ -0.89
USP11-208ENST00000480104 FPR3P25089 353 aa9.47□□□□□ -0.89
USP11-208ENST00000480104 HTR2AP28223 471 aa9.47□□□□□ -0.89
USP11-208ENST00000480104 MYCNOSP40205 109 aa9.47□□□□□ -0.89
USP11-208ENST00000480104 GP2P55259 537 aaKnown RBP9.47□□□□□ -0.89
USP11-208ENST00000480104 MAPK11Q15759 364 aa9.47□□□□□ -0.89
USP11-208ENST00000480104 C10orf128Q5T292 105 aa9.47□□□□□ -0.89
USP11-208ENST00000480104 C1orf94Q6P1W5 598 aa9.47□□□□□ -0.89
USP11-208ENST00000480104 RNF165Q6ZSG1 346 aa9.47□□□□□ -0.89
USP11-208ENST00000480104 LRRC34Q8IZ02 419 aa9.47□□□□□ -0.89
USP11-208ENST00000480104 OR52H1Q8NGJ2 320 aa9.47□□□□□ -0.89
USP11-208ENST00000480104 OR5J2Q8NH18 312 aa9.47□□□□□ -0.89
USP11-208ENST00000480104 ITCHQ96J02 903 aa9.47□□□□□ -0.89
USP11-208ENST00000480104 ZNF583Q96ND8 569 aa9.47□□□□□ -0.89
USP11-208ENST00000480104 CCDC115Q96NT0 180 aa9.47□□□□□ -0.89
USP11-208ENST00000480104 SLC35A5Q9BS91 424 aa9.47□□□□□ -0.89
USP11-208ENST00000480104 PTTG3PQ9NZH4 202 aa9.47□□□□□ -0.89
USP11-208ENST00000480104 KAAG1Q9UBP8 84 aa9.47□□□□□ -0.89
USP11-208ENST00000480104 IGHV3OR15-7A0A075B7D8 119 aa9.46□□□□□ -0.9
USP11-208ENST00000480104 IGKV1D-43A0A0B4J1Z2 117 aa9.46□□□□□ -0.9
USP11-208ENST00000480104 A0A1B0GWJ7 208 aa9.46□□□□□ -0.9
USP11-208ENST00000480104 AZIN1O14977 448 aa9.46□□□□□ -0.9
USP11-208ENST00000480104 PEX11AO75192 247 aa9.46□□□□□ -0.9
USP11-208ENST00000480104 OR6A2O95222 327 aa9.46□□□□□ -0.9
USP11-208ENST00000480104 SERPINB9P50453 376 aa9.46□□□□□ -0.9
USP11-208ENST00000480104 RPL23AP62750 156 aaKnown RBP9.46□□□□□ -0.9
USP11-208ENST00000480104 RABL3Q5HYI8 236 aa9.46□□□□□ -0.9
USP11-208ENST00000480104 ALG10BQ5I7T1 473 aa9.46□□□□□ -0.9
USP11-208ENST00000480104 FAM216BQ8N7L0 139 aa9.46□□□□□ -0.9
USP11-208ENST00000480104 CELF2-AS1Q8N7Q2 184 aa9.46□□□□□ -0.9
USP11-208ENST00000480104 SEPHS2Q99611 448 aa9.46□□□□□ -0.9
USP11-208ENST00000480104 MRPL13Q9BYD1 178 aaKnown RBP9.46□□□□□ -0.9
USP11-208ENST00000480104 KCNG2Q9UJ96 466 aa9.46□□□□□ -0.9
USP11-208ENST00000480104 TIMM10BQ9Y5J6 103 aa9.46□□□□□ -0.9
USP11-208ENST00000480104 DNAJC15Q9Y5T4 150 aa9.46□□□□□ -0.9
USP11-208ENST00000480104 DMBT1Q9UGM3 2413 aaPredicted RBP9.45□□□□□ -0.9
USP11-208ENST00000480104 NUDT19A8MXV4 375 aa9.45□□□□□ -0.9
USP11-208ENST00000480104 M0R1W7 72 aa9.45□□□□□ -0.9
USP11-208ENST00000480104 RNF13O43567 381 aa9.45□□□□□ -0.9
USP11-208ENST00000480104 HCKP08631 526 aa9.45□□□□□ -0.9
USP11-208ENST00000480104 ETFAP13804 333 aa9.45□□□□□ -0.9
USP11-208ENST00000480104 LAP3P28838 519 aa9.45□□□□□ -0.9
USP11-208ENST00000480104 CD200P41217 278 aa9.45□□□□□ -0.9
USP11-208ENST00000480104 ZNF133P52736 654 aaPredicted RBP9.45□□□□□ -0.9
USP11-208ENST00000480104 PLTPP55058 493 aa9.45□□□□□ -0.9
USP11-208ENST00000480104 SLC7A5Q01650 507 aa9.45□□□□□ -0.9
USP11-208ENST00000480104 FMODQ06828 376 aa9.45□□□□□ -0.9
USP11-208ENST00000480104 CFAP157Q5JU67 520 aa9.45□□□□□ -0.9
USP11-208ENST00000480104 FBXW12Q6X9E4 464 aa9.45□□□□□ -0.9
USP11-208ENST00000480104 OR2W3Q7Z3T1 314 aa9.45□□□□□ -0.9
USP11-208ENST00000480104 RANBP3LQ86VV4 465 aaPredicted RBP9.45□□□□□ -0.9
USP11-208ENST00000480104 DYNAPQ8N1N2 210 aa9.45□□□□□ -0.9
USP11-208ENST00000480104 SPC24Q8NBT2 197 aa9.45□□□□□ -0.9
USP11-208ENST00000480104 RPS4Y2Q8TD47 263 aa9.45□□□□□ -0.9
USP11-208ENST00000480104 DNAJA4Q8WW22 397 aaPredicted RBP9.45□□□□□ -0.9
USP11-208ENST00000480104 H1FXQ92522 213 aaKnown RBP9.45□□□□□ -0.9
USP11-208ENST00000480104 COG8Q96MW5 612 aa9.45□□□□□ -0.9
USP11-208ENST00000480104 PAFAH2Q99487 392 aa9.45□□□□□ -0.9
USP11-208ENST00000480104 CCL13Q99616 98 aa9.45□□□□□ -0.9
USP11-208ENST00000480104 TMEM100Q9NV29 134 aa9.45□□□□□ -0.9
USP11-208ENST00000480104 TAS2R5Q9NYW4 299 aa9.45□□□□□ -0.9
USP11-208ENST00000480104 PLA2G2EQ9NZK7 142 aa9.45□□□□□ -0.9
USP11-208ENST00000480104 PITPNC1Q9UKF7 332 aa9.45□□□□□ -0.9
USP11-208ENST00000480104 PRPF19Q9UMS4 504 aaKnown RBP9.45□□□□□ -0.9
USP11-208ENST00000480104 DNAH6Q9C0G6 4158 aa9.44□□□□□ -0.9
USP11-208ENST00000480104 IQCF6A8MYZ5 107 aa9.44□□□□□ -0.9
USP11-208ENST00000480104 TMEM233B4DJY2 109 aa9.44□□□□□ -0.9
USP11-208ENST00000480104 SEC14L6B5MCN3 397 aa9.44□□□□□ -0.9
USP11-208ENST00000480104 LDLRAD4O15165 306 aa9.44□□□□□ -0.9
USP11-208ENST00000480104 CHEK2O96017 543 aa9.44□□□□□ -0.9
USP11-208ENST00000480104 SNRNP70P08621 437 aaKnown RBP9.44□□□□□ -0.9
USP11-208ENST00000480104 CST2P09228 141 aa9.44□□□□□ -0.9
USP11-208ENST00000480104 PRSS12P56730 875 aa9.44□□□□□ -0.9
USP11-208ENST00000480104 IKZF1Q13422 519 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms