RNA–Protein interactions for RNA: ENST00000480055.5

SMURF1-204, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene SMURF1, Length 1,012 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-204ENST00000480055 PPP1R3CQ9UQK1 317 aa8.69□□□□□ -1.02
SMURF1-204ENST00000480055 POMPQ9Y244 141 aa8.69□□□□□ -1.02
SMURF1-204ENST00000480055 TIMM10BQ9Y5J6 103 aa8.69□□□□□ -1.02
SMURF1-204ENST00000480055 TRBV5-3A0A0A0MS03 114 aa8.68□□□□□ -1.02
SMURF1-204ENST00000480055 H3BNX3 289 aa8.68□□□□□ -1.02
SMURF1-204ENST00000480055 SURF4O15260 269 aa8.68□□□□□ -1.02
SMURF1-204ENST00000480055 ABHD16AO95870 558 aa8.68□□□□□ -1.02
SMURF1-204ENST00000480055 MT-ND1P03886 318 aa8.68□□□□□ -1.02
SMURF1-204ENST00000480055 CRYBA1P05813 215 aa8.68□□□□□ -1.02
SMURF1-204ENST00000480055 LYNP07948 512 aa8.68□□□□□ -1.02
SMURF1-204ENST00000480055 ADH4P08319 380 aa8.68□□□□□ -1.02
SMURF1-204ENST00000480055 VAMP1P23763 118 aa8.68□□□□□ -1.02
SMURF1-204ENST00000480055 MRPL19P49406 292 aaKnown RBP8.68□□□□□ -1.02
SMURF1-204ENST00000480055 PCBP3P57721 371 aaKnown RBP8.68□□□□□ -1.02
SMURF1-204ENST00000480055 MTPNP58546 118 aa8.68□□□□□ -1.02
SMURF1-204ENST00000480055 MXRA7P84157 204 aa8.68□□□□□ -1.02
SMURF1-204ENST00000480055 PSG7Q13046 419 aa8.68□□□□□ -1.02
SMURF1-204ENST00000480055 CDK5R2Q13319 367 aa8.68□□□□□ -1.02
SMURF1-204ENST00000480055 TMEM155Q4W5P6 130 aa8.68□□□□□ -1.02
SMURF1-204ENST00000480055 OGFRL1Q5TC84 451 aaPredicted RBP8.68□□□□□ -1.02
SMURF1-204ENST00000480055 FAM27BQ5VT28 67 aa8.68□□□□□ -1.02
SMURF1-204ENST00000480055 ZNF774Q6NX45 483 aa8.68□□□□□ -1.02
SMURF1-204ENST00000480055 C16orf89Q6UX73 402 aa8.68□□□□□ -1.02
SMURF1-204ENST00000480055 LRRC28Q86X40 367 aaPredicted RBP8.68□□□□□ -1.02
SMURF1-204ENST00000480055 SLC30A8Q8IWU4 369 aa8.68□□□□□ -1.02
SMURF1-204ENST00000480055 PARP8Q8N3A8 854 aa8.68□□□□□ -1.02
SMURF1-204ENST00000480055 MOSPD2Q8NHP6 518 aa8.68□□□□□ -1.02
SMURF1-204ENST00000480055 TMEM255BQ8WV15 326 aa8.68□□□□□ -1.02
SMURF1-204ENST00000480055 RASSF5Q8WWW0 418 aa8.68□□□□□ -1.02
SMURF1-204ENST00000480055 HDAC2Q92769 488 aaKnown RBP8.68□□□□□ -1.02
SMURF1-204ENST00000480055 NABP1Q96AH0 204 aa8.68□□□□□ -1.02
SMURF1-204ENST00000480055 TMIGD2Q96BF3 282 aa8.68□□□□□ -1.02
SMURF1-204ENST00000480055 CLPTM1LQ96KA5 538 aa8.68□□□□□ -1.02
SMURF1-204ENST00000480055 SAMD8Q96LT4 415 aa8.68□□□□□ -1.02
SMURF1-204ENST00000480055 WNT5BQ9H1J7 359 aa8.68□□□□□ -1.02
SMURF1-204ENST00000480055 SMURF2Q9HAU4 748 aa8.68□□□□□ -1.02
SMURF1-204ENST00000480055 MAN2C1Q9NTJ4 1040 aa8.68□□□□□ -1.02
SMURF1-204ENST00000480055 KLHL21Q9UJP4 597 aa8.68□□□□□ -1.02
SMURF1-204ENST00000480055 SH3GLB1Q9Y371 365 aa8.68□□□□□ -1.02
SMURF1-204ENST00000480055 UGT2A1Q9Y4X1 527 aa8.68□□□□□ -1.02
SMURF1-204ENST00000480055 MMP24Q9Y5R2 645 aa8.68□□□□□ -1.02
SMURF1-204ENST00000480055 GMEB1Q9Y692 573 aa8.68□□□□□ -1.02
SMURF1-204ENST00000480055 IGKV1D-43A0A0B4J1Z2 117 aa8.67□□□□□ -1.02
SMURF1-204ENST00000480055 H3BSA7 217 aa8.67□□□□□ -1.02
SMURF1-204ENST00000480055 ANGPT2O15123 496 aa8.67□□□□□ -1.02
SMURF1-204ENST00000480055 KNG1P01042 644 aa8.67□□□□□ -1.02
SMURF1-204ENST00000480055 CST2P09228 141 aa8.67□□□□□ -1.02
SMURF1-204ENST00000480055 IGHV4-38-2P0DP08 117 aa8.67□□□□□ -1.02
SMURF1-204ENST00000480055 CALRP27797 417 aaKnown RBP8.67□□□□□ -1.02
SMURF1-204ENST00000480055 CD80P33681 288 aa8.67□□□□□ -1.02
SMURF1-204ENST00000480055 MDH2P40926 338 aaKnown RBP8.67□□□□□ -1.02
SMURF1-204ENST00000480055 ZNF133P52736 654 aaPredicted RBP8.67□□□□□ -1.02
SMURF1-204ENST00000480055 SELPLGQ14242 412 aa8.67□□□□□ -1.02
SMURF1-204ENST00000480055 ZMYND11Q15326 602 aa8.67□□□□□ -1.02
SMURF1-204ENST00000480055 ALG10Q5BKT4 473 aa8.67□□□□□ -1.02
SMURF1-204ENST00000480055 ARMC4Q5T2S8 1044 aa8.67□□□□□ -1.02
SMURF1-204ENST00000480055 INTS11Q5TA45 600 aaKnown RBP8.67□□□□□ -1.02
SMURF1-204ENST00000480055 ZBTB37Q5TC79 503 aa8.67□□□□□ -1.02
SMURF1-204ENST00000480055 HIST2H2BDQ6DRA6 164 aa8.67□□□□□ -1.02
SMURF1-204ENST00000480055 C1orf94Q6P1W5 598 aa8.67□□□□□ -1.02
SMURF1-204ENST00000480055 C16orf87Q6PH81 154 aa8.67□□□□□ -1.02
SMURF1-204ENST00000480055 LRRN1Q6UXK5 716 aa8.67□□□□□ -1.02
SMURF1-204ENST00000480055 DLEU7Q6UYE1 221 aa8.67□□□□□ -1.02
SMURF1-204ENST00000480055 TSPYL5Q86VY4 417 aaPredicted RBP8.67□□□□□ -1.02
SMURF1-204ENST00000480055 NKAIN4Q8IVV8 208 aa8.67□□□□□ -1.02
SMURF1-204ENST00000480055 PGAM4Q8N0Y7 254 aa8.67□□□□□ -1.02
SMURF1-204ENST00000480055 MUC20Q8N307 709 aaPredicted RBP8.67□□□□□ -1.02
SMURF1-204ENST00000480055 ATG16L2Q8NAA4 619 aa8.67□□□□□ -1.02
SMURF1-204ENST00000480055 TMEM239Q8WW34 195 aa8.67□□□□□ -1.02
SMURF1-204ENST00000480055 ITLN1Q8WWA0 313 aa8.67□□□□□ -1.02
SMURF1-204ENST00000480055 TAMM41Q96BW9 452 aa8.67□□□□□ -1.02
SMURF1-204ENST00000480055 CMBLQ96DG6 245 aa8.67□□□□□ -1.02
SMURF1-204ENST00000480055 TSC22D3Q99576 134 aa8.67□□□□□ -1.02
SMURF1-204ENST00000480055 SEPHS2Q99611 448 aa8.67□□□□□ -1.02
SMURF1-204ENST00000480055 PRSS27Q9BQR3 290 aa8.67□□□□□ -1.02
SMURF1-204ENST00000480055 ZNF426Q9BUY5 554 aa8.67□□□□□ -1.02
SMURF1-204ENST00000480055 SSBP3Q9BWW4 388 aaPredicted RBP8.67□□□□□ -1.02
SMURF1-204ENST00000480055 TXNIPQ9H3M7 391 aa8.67□□□□□ -1.02
SMURF1-204ENST00000480055 C20orf141Q9NUB4 165 aa8.67□□□□□ -1.02
SMURF1-204ENST00000480055 IL20RAQ9UHF4 553 aa8.67□□□□□ -1.02
SMURF1-204ENST00000480055 NDRG4Q9ULP0 352 aaKnown RBP8.67□□□□□ -1.02
SMURF1-204ENST00000480055 POLR3KQ9Y2Y1 108 aaPredicted RBP8.67□□□□□ -1.02
SMURF1-204ENST00000480055 NDUFAF1Q9Y375 327 aa8.67□□□□□ -1.02
SMURF1-204ENST00000480055 SOX21Q9Y651 276 aaPredicted RBP8.67□□□□□ -1.02
SMURF1-204ENST00000480055 C12orf71A8MTZ7 269 aa8.66□□□□□ -1.02
SMURF1-204ENST00000480055 H0YJX3 145 aa8.66□□□□□ -1.02
SMURF1-204ENST00000480055 HOXA3O43365 443 aaPredicted RBP8.66□□□□□ -1.02
SMURF1-204ENST00000480055 DENRO43583 198 aaKnown RBP8.66□□□□□ -1.02
SMURF1-204ENST00000480055 ZNF205O95201 554 aa8.66□□□□□ -1.02
SMURF1-204ENST00000480055 RPS2P15880 293 aaKnown RBP8.66□□□□□ -1.02
SMURF1-204ENST00000480055 RBM34P42696 430 aaKnown RBP8.66□□□□□ -1.02
SMURF1-204ENST00000480055 GNB2P62879 340 aa8.66□□□□□ -1.02
SMURF1-204ENST00000480055 PAX8Q06710 450 aa8.66□□□□□ -1.02
SMURF1-204ENST00000480055 NFYCQ13952 458 aa8.66□□□□□ -1.02
SMURF1-204ENST00000480055 FOXB2Q5VYV0 432 aa8.66□□□□□ -1.02
SMURF1-204ENST00000480055 SLC25A47Q6Q0C1 308 aa8.66□□□□□ -1.02
SMURF1-204ENST00000480055 DEFB107AQ8IZN7 70 aa8.66□□□□□ -1.02
SMURF1-204ENST00000480055 OR5AS1Q8N127 324 aa8.66□□□□□ -1.02
SMURF1-204ENST00000480055 KIR3DL3Q8N743 410 aa8.66□□□□□ -1.02
SMURF1-204ENST00000480055 ZNF283Q8N7M2 679 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms