RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-238	ENST00000479894	FOXB1	Q99853	325 aa		13.33	□□□□□ -0.28
HDLBP-238	ENST00000479894	SLC6A7	Q99884	636 aa		13.33	□□□□□ -0.28
HDLBP-238	ENST00000479894	SYT4	Q9H2B2	425 aa		13.33	□□□□□ -0.28
HDLBP-238	ENST00000479894	UNKL	Q9H9P5	680 aa	Known RBP	13.33	□□□□□ -0.28
HDLBP-238	ENST00000479894	SIAE	Q9HAT2	523 aa		13.33	□□□□□ -0.28
HDLBP-238	ENST00000479894	TVP23B	Q9NYZ1	205 aa		13.33	□□□□□ -0.28
HDLBP-238	ENST00000479894	LOC105371242	A0A075B767	164 aa		13.32	□□□□□ -0.28
HDLBP-238	ENST00000479894	SURF4	O15260	269 aa		13.32	□□□□□ -0.28
HDLBP-238	ENST00000479894	SLC16A6	O15403	523 aa		13.32	□□□□□ -0.28
HDLBP-238	ENST00000479894	GAA	P10253	952 aa		13.32	□□□□□ -0.28
HDLBP-238	ENST00000479894	CDKN2A	P42771	156 aa	Known RBP	13.32	□□□□□ -0.28
HDLBP-238	ENST00000479894	GPR6	P46095	362 aa	Predicted RBP	13.32	□□□□□ -0.28
HDLBP-238	ENST00000479894	ARF1	P84077	181 aa	Known RBP	13.32	□□□□□ -0.28
HDLBP-238	ENST00000479894	NAAA	Q02083	359 aa		13.32	□□□□□ -0.28
HDLBP-238	ENST00000479894	IL18R1	Q13478	541 aa		13.32	□□□□□ -0.28
HDLBP-238	ENST00000479894	C9orf135	Q5VTT2	229 aa		13.32	□□□□□ -0.28
HDLBP-238	ENST00000479894	SLC25A47	Q6Q0C1	308 aa		13.32	□□□□□ -0.28
HDLBP-238	ENST00000479894	VHLL	Q6RSH7	139 aa		13.32	□□□□□ -0.28
HDLBP-238	ENST00000479894	BPIFB2	Q8N4F0	458 aa		13.32	□□□□□ -0.28
HDLBP-238	ENST00000479894	DHRSX	Q8N5I4	330 aa		13.32	□□□□□ -0.28
HDLBP-238	ENST00000479894	SLC37A3	Q8NCC5	494 aa		13.32	□□□□□ -0.28
HDLBP-238	ENST00000479894	NPEPL1	Q8NDH3	523 aa		13.32	□□□□□ -0.28
HDLBP-238	ENST00000479894	SETD9	Q8NE22	299 aa		13.32	□□□□□ -0.28
HDLBP-238	ENST00000479894	OR1K1	Q8NGR3	316 aa		13.32	□□□□□ -0.28
HDLBP-238	ENST00000479894	RFK	Q969G6	155 aa		13.32	□□□□□ -0.28
HDLBP-238	ENST00000479894	NMD3	Q96D46	503 aa	Known RBP	13.32	□□□□□ -0.28
HDLBP-238	ENST00000479894	TOR3A	Q9H497	397 aa		13.32	□□□□□ -0.28
HDLBP-238	ENST00000479894	LPAR2	Q9HBW0	351 aa		13.32	□□□□□ -0.28
HDLBP-238	ENST00000479894	G6PC2	Q9NQR9	355 aa		13.32	□□□□□ -0.28
HDLBP-238	ENST00000479894	CRNN	Q9UBG3	495 aa	Predicted RBP	13.32	□□□□□ -0.28
HDLBP-238	ENST00000479894	NKX1-2	Q9UD57	310 aa	Predicted RBP	13.32	□□□□□ -0.28
HDLBP-238	ENST00000479894	GMPPB	Q9Y5P6	360 aa		13.32	□□□□□ -0.28
HDLBP-238	ENST00000479894	C12orf71	A8MTZ7	269 aa		13.31	□□□□□ -0.28
HDLBP-238	ENST00000479894		H0YAE9	185 aa		13.31	□□□□□ -0.28
HDLBP-238	ENST00000479894	PRODH	O43272	600 aa		13.31	□□□□□ -0.28
HDLBP-238	ENST00000479894	AVP	P01185	164 aa		13.31	□□□□□ -0.28
HDLBP-238	ENST00000479894	IGFBP1	P08833	259 aa	Predicted RBP	13.31	□□□□□ -0.28
HDLBP-238	ENST00000479894	LAP3	P28838	519 aa		13.31	□□□□□ -0.28
HDLBP-238	ENST00000479894	PTDSS1	P48651	473 aa	Known RBP	13.31	□□□□□ -0.28
HDLBP-238	ENST00000479894	IL13RA1	P78552	427 aa		13.31	□□□□□ -0.28
HDLBP-238	ENST00000479894	SLC36A2	Q495M3	483 aa		13.31	□□□□□ -0.28
HDLBP-238	ENST00000479894	SLC35D3	Q5M8T2	416 aa		13.31	□□□□□ -0.28
HDLBP-238	ENST00000479894	MEDAG	Q5VYS4	303 aa		13.31	□□□□□ -0.28
HDLBP-238	ENST00000479894	C12orf73	Q69YU5	71 aa		13.31	□□□□□ -0.28
HDLBP-238	ENST00000479894	ACSM5	Q6NUN0	579 aa		13.31	□□□□□ -0.28
HDLBP-238	ENST00000479894	ZBTB46	Q86UZ6	589 aa		13.31	□□□□□ -0.28
HDLBP-238	ENST00000479894	ZCCHC24	Q8N2G6	241 aa	Known RBP	13.31	□□□□□ -0.28
HDLBP-238	ENST00000479894	IQCF1	Q8N6M8	205 aa		13.31	□□□□□ -0.28
HDLBP-238	ENST00000479894	SDR9C7	Q8NEX9	313 aa		13.31	□□□□□ -0.28
HDLBP-238	ENST00000479894	PROKR2	Q8NFJ6	384 aa		13.31	□□□□□ -0.28
HDLBP-238	ENST00000479894	NANP	Q8TBE9	248 aa		13.31	□□□□□ -0.28
HDLBP-238	ENST00000479894		Q96MT0	163 aa		13.31	□□□□□ -0.28
HDLBP-238	ENST00000479894	NUAK2	Q9H093	628 aa		13.31	□□□□□ -0.28
HDLBP-238	ENST00000479894	NELFA	Q9H3P2	528 aa		13.31	□□□□□ -0.28
HDLBP-238	ENST00000479894	RERGL	Q9H628	205 aa		13.31	□□□□□ -0.28
HDLBP-238	ENST00000479894	SEC61A2	Q9H9S3	476 aa		13.31	□□□□□ -0.28
HDLBP-238	ENST00000479894	ZMAT3	Q9HA38	289 aa	Known RBP	13.31	□□□□□ -0.28
HDLBP-238	ENST00000479894	SRA1	Q9HD15	236 aa	Known RBP	13.31	□□□□□ -0.28
HDLBP-238	ENST00000479894	DYNLRB1	Q9NP97	96 aa		13.31	□□□□□ -0.28
HDLBP-238	ENST00000479894	RPRD1B	Q9NQG5	326 aa	Known RBP	13.31	□□□□□ -0.28
HDLBP-238	ENST00000479894	TMEM38B	Q9NVV0	291 aa		13.31	□□□□□ -0.28
HDLBP-238	ENST00000479894	KCNG2	Q9UJ96	466 aa		13.31	□□□□□ -0.28
HDLBP-238	ENST00000479894	B9D1	Q9UPM9	204 aa		13.31	□□□□□ -0.28
HDLBP-238	ENST00000479894	ARPC4-TTLL3	A0A0A6YYG9	625 aa		13.3	□□□□□ -0.28
HDLBP-238	ENST00000479894	LOC100130705	A0A1B0GUX0	176 aa		13.3	□□□□□ -0.28
HDLBP-238	ENST00000479894	TMEM129	A0AVI4	362 aa		13.3	□□□□□ -0.28
HDLBP-238	ENST00000479894	OR6C68	A6NDL8	312 aa		13.3	□□□□□ -0.28
HDLBP-238	ENST00000479894	LYNX1	G3V0Z9	82 aa		13.3	□□□□□ -0.28
HDLBP-238	ENST00000479894	UBL3	O95164	117 aa		13.3	□□□□□ -0.28
HDLBP-238	ENST00000479894	SNAP29	O95721	258 aa		13.3	□□□□□ -0.28
HDLBP-238	ENST00000479894	PTH	P01270	115 aa		13.3	□□□□□ -0.28
HDLBP-238	ENST00000479894	LYNX1	P0DP58	116 aa		13.3	□□□□□ -0.28
HDLBP-238	ENST00000479894	MSR1	P21757	451 aa		13.3	□□□□□ -0.28
HDLBP-238	ENST00000479894	FMO3	P31513	532 aa		13.3	□□□□□ -0.28
HDLBP-238	ENST00000479894	GGT2	P36268	569 aa		13.3	□□□□□ -0.28
HDLBP-238	ENST00000479894	ARR3	P36575	388 aa		13.3	□□□□□ -0.28
HDLBP-238	ENST00000479894	LSM6	P62312	80 aa	Known RBP	13.3	□□□□□ -0.28
HDLBP-238	ENST00000479894	TMED1	Q13445	227 aa		13.3	□□□□□ -0.28
HDLBP-238	ENST00000479894	CRMP1	Q14194	572 aa		13.3	□□□□□ -0.28
HDLBP-238	ENST00000479894	ZIK1	Q3SY52	487 aa	Predicted RBP	13.3	□□□□□ -0.28
HDLBP-238	ENST00000479894	TBRG1	Q3YBR2	411 aa		13.3	□□□□□ -0.28
HDLBP-238	ENST00000479894	PHYHD1	Q5SRE7	291 aa		13.3	□□□□□ -0.28
HDLBP-238	ENST00000479894	LCN1P1	Q5VSP4	162 aa		13.3	□□□□□ -0.28
HDLBP-238	ENST00000479894	FAM27B	Q5VT28	67 aa		13.3	□□□□□ -0.28
HDLBP-238	ENST00000479894	TMEM53	Q6P2H8	277 aa		13.3	□□□□□ -0.28
HDLBP-238	ENST00000479894	FOXL2NB	Q6ZUU3	175 aa		13.3	□□□□□ -0.28
HDLBP-238	ENST00000479894	PTCHD4	Q6ZW05	846 aa		13.3	□□□□□ -0.28
HDLBP-238	ENST00000479894	SYT9	Q86SS6	491 aa		13.3	□□□□□ -0.28
HDLBP-238	ENST00000479894	GID4	Q8IVV7	300 aa		13.3	□□□□□ -0.28
HDLBP-238	ENST00000479894	SLC22A24	Q8N4F4	322 aa		13.3	□□□□□ -0.28
HDLBP-238	ENST00000479894	FAM169B	Q8N8A8	192 aa		13.3	□□□□□ -0.28
HDLBP-238	ENST00000479894	TMEM163	Q8TC26	289 aa		13.3	□□□□□ -0.28
HDLBP-238	ENST00000479894	NSMAF	Q92636	917 aa		13.3	□□□□□ -0.28
HDLBP-238	ENST00000479894	BCL2L2	Q92843	193 aa	Predicted RBP	13.3	□□□□□ -0.28
HDLBP-238	ENST00000479894	OTULIN	Q96BN8	352 aa		13.3	□□□□□ -0.28
HDLBP-238	ENST00000479894	FAM118A	Q9NWS6	357 aa		13.3	□□□□□ -0.28
HDLBP-238	ENST00000479894	NDRG4	Q9ULP0	352 aa	Known RBP	13.3	□□□□□ -0.28
HDLBP-238	ENST00000479894		A0A1W2PPL8	197 aa		13.29	□□□□□ -0.28
HDLBP-238	ENST00000479894		H7C1C5	153 aa		13.29	□□□□□ -0.28
HDLBP-238	ENST00000479894		J3QLI3	93 aa		13.29	□□□□□ -0.28

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