RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 GABARAPL3Q9BY60 117 aa13.26□□□□□ -0.29
C9orf3-217ENST00000479161 CYSLTR2Q9NS75 346 aa13.26□□□□□ -0.29
C9orf3-217ENST00000479161 USE1Q9NZ43 259 aa13.26□□□□□ -0.29
C9orf3-217ENST00000479161 ZANQ9Y493 2812 aa13.26□□□□□ -0.29
C9orf3-217ENST00000479161 YLPM1P49750 1951 aaKnown RBP13.25□□□□□ -0.29
C9orf3-217ENST00000479161 ZNF593O00488 134 aaPredicted RBP13.25□□□□□ -0.29
C9orf3-217ENST00000479161 NGFP01138 241 aa13.25□□□□□ -0.29
C9orf3-217ENST00000479161 SLC2A5P22732 501 aa13.25□□□□□ -0.29
C9orf3-217ENST00000479161 IGFBP5P24593 272 aa13.25□□□□□ -0.29
C9orf3-217ENST00000479161 C12orf73Q69YU5 71 aa13.25□□□□□ -0.29
C9orf3-217ENST00000479161 CORO6Q6QEF8 472 aa13.25□□□□□ -0.29
C9orf3-217ENST00000479161 FBXW12Q6X9E4 464 aa13.25□□□□□ -0.29
C9orf3-217ENST00000479161 CFAP77Q6ZQR2 320 aa13.25□□□□□ -0.29
C9orf3-217ENST00000479161 RFPL4BQ6ZWI9 263 aa13.25□□□□□ -0.29
C9orf3-217ENST00000479161 LRP11Q86VZ4 500 aa13.25□□□□□ -0.29
C9orf3-217ENST00000479161 TIGD4Q8IY51 512 aa13.25□□□□□ -0.29
C9orf3-217ENST00000479161 ABHD4Q8TB40 342 aa13.25□□□□□ -0.29
C9orf3-217ENST00000479161 MAP6Q96JE9 813 aa13.25□□□□□ -0.29
C9orf3-217ENST00000479161 PITX2Q99697 317 aa13.25□□□□□ -0.29
C9orf3-217ENST00000479161 PKP2Q99959 881 aa13.25□□□□□ -0.29
C9orf3-217ENST00000479161 VRK1Q99986 396 aaPredicted RBP13.25□□□□□ -0.29
C9orf3-217ENST00000479161 RHNO1Q9BSD3 238 aa13.25□□□□□ -0.29
C9orf3-217ENST00000479161 HCAR1Q9BXC0 346 aa13.25□□□□□ -0.29
C9orf3-217ENST00000479161 S100A14Q9HCY8 104 aa13.25□□□□□ -0.29
C9orf3-217ENST00000479161 DYNLRB1Q9NP97 96 aa13.25□□□□□ -0.29
C9orf3-217ENST00000479161 HINT3Q9NQE9 182 aaKnown RBP13.25□□□□□ -0.29
C9orf3-217ENST00000479161 DUSP13Q9UII6 198 aa13.25□□□□□ -0.29
C9orf3-217ENST00000479161 TLN2Q9Y4G6 2542 aa13.25□□□□□ -0.29
C9orf3-217ENST00000479161 SETD2Q9BYW2 2564 aaPredicted RBP13.25□□□□□ -0.29
C9orf3-217ENST00000479161 ABCA1O95477 2261 aa13.24□□□□□ -0.29
C9orf3-217ENST00000479161 LOC390937A0A1W2PQ73 354 aa13.24□□□□□ -0.29
C9orf3-217ENST00000479161 FAM183AA6NL82 134 aa13.24□□□□□ -0.29
C9orf3-217ENST00000479161 SSX4O60224 188 aa13.24□□□□□ -0.29
C9orf3-217ENST00000479161 ALPLP05186 524 aa13.24□□□□□ -0.29
C9orf3-217ENST00000479161 GYPBP06028 91 aa13.24□□□□□ -0.29
C9orf3-217ENST00000479161 ADRA2AP08913 450 aa13.24□□□□□ -0.29
C9orf3-217ENST00000479161 CLUP10909 449 aa13.24□□□□□ -0.29
C9orf3-217ENST00000479161 RAC2P15153 192 aa13.24□□□□□ -0.29
C9orf3-217ENST00000479161 SLC25A16P16260 332 aa13.24□□□□□ -0.29
C9orf3-217ENST00000479161 KITLGP21583 273 aa13.24□□□□□ -0.29
C9orf3-217ENST00000479161 GIFP27352 417 aa13.24□□□□□ -0.29
C9orf3-217ENST00000479161 GSTT1P30711 240 aa13.24□□□□□ -0.29
C9orf3-217ENST00000479161 TNK1Q13470 666 aa13.24□□□□□ -0.29
C9orf3-217ENST00000479161 SNAPC1Q16533 368 aa13.24□□□□□ -0.29
C9orf3-217ENST00000479161 ZMAT1Q5H9K5 638 aa13.24□□□□□ -0.29
C9orf3-217ENST00000479161 PLBD1Q6P4A8 553 aa13.24□□□□□ -0.29
C9orf3-217ENST00000479161 BIVMQ86UB2 503 aa13.24□□□□□ -0.29
C9orf3-217ENST00000479161 CPOQ8IVL8 374 aa13.24□□□□□ -0.29
C9orf3-217ENST00000479161 ZNF454Q8N9F8 522 aa13.24□□□□□ -0.29
C9orf3-217ENST00000479161 ZNF511Q8NB15 262 aa13.24□□□□□ -0.29
C9orf3-217ENST00000479161 ZNF540Q8NDQ6 660 aa13.24□□□□□ -0.29
C9orf3-217ENST00000479161 OR51L1Q8NGJ5 315 aa13.24□□□□□ -0.29
C9orf3-217ENST00000479161 OR6K6Q8NGW6 343 aa13.24□□□□□ -0.29
C9orf3-217ENST00000479161 SLC25A40Q8TBP6 338 aa13.24□□□□□ -0.29
C9orf3-217ENST00000479161 ST7LQ8TDW4 575 aa13.24□□□□□ -0.29
C9orf3-217ENST00000479161 SPTSSAQ969W0 71 aa13.24□□□□□ -0.29
C9orf3-217ENST00000479161 HAVCR1Q96D42 359 aa13.24□□□□□ -0.29
C9orf3-217ENST00000479161 DIRC2Q96SL1 478 aa13.24□□□□□ -0.29
C9orf3-217ENST00000479161 INTS14Q96SY0 518 aa13.24□□□□□ -0.29
C9orf3-217ENST00000479161 CIB1Q99828 191 aa13.24□□□□□ -0.29
C9orf3-217ENST00000479161 SYT3Q9BQG1 590 aa13.24□□□□□ -0.29
C9orf3-217ENST00000479161 OR2J1Q9GZK6 312 aa13.24□□□□□ -0.29
C9orf3-217ENST00000479161 SEMA6AQ9H2E6 1030 aa13.24□□□□□ -0.29
C9orf3-217ENST00000479161 TOR3AQ9H497 397 aa13.24□□□□□ -0.29
C9orf3-217ENST00000479161 WDR76Q9H967 626 aa13.24□□□□□ -0.29
C9orf3-217ENST00000479161 TAAR3PQ9P1P4 343 aa13.24□□□□□ -0.29
C9orf3-217ENST00000479161 GRIP1Q9Y3R0 1128 aa13.24□□□□□ -0.29
C9orf3-217ENST00000479161 A0A1W2PPW3 197 aa13.23□□□□□ -0.29
C9orf3-217ENST00000479161 C17orf100A8MU93 164 aa13.23□□□□□ -0.29
C9orf3-217ENST00000479161 E9PQ18 207 aa13.23□□□□□ -0.29
C9orf3-217ENST00000479161 CLPTM1O96005 669 aa13.23□□□□□ -0.29
C9orf3-217ENST00000479161 APOC1P02654 83 aa13.23□□□□□ -0.29
C9orf3-217ENST00000479161 INHBBP09529 407 aa13.23□□□□□ -0.29
C9orf3-217ENST00000479161 ACSM4P0C7M7 580 aa13.23□□□□□ -0.29
C9orf3-217ENST00000479161 SLC15A1P46059 708 aa13.23□□□□□ -0.29
C9orf3-217ENST00000479161 PDLIM4P50479 330 aa13.23□□□□□ -0.29
C9orf3-217ENST00000479161 MMP15P51511 669 aa13.23□□□□□ -0.29
C9orf3-217ENST00000479161 TPTEP56180 551 aa13.23□□□□□ -0.29
C9orf3-217ENST00000479161 ERVS71-1P61550 626 aa13.23□□□□□ -0.29
C9orf3-217ENST00000479161 NKPD1Q17RQ9 610 aa13.23□□□□□ -0.29
C9orf3-217ENST00000479161 TMEM236Q5W0B7 351 aa13.23□□□□□ -0.29
C9orf3-217ENST00000479161 DRAM2Q6UX65 266 aa13.23□□□□□ -0.29
C9orf3-217ENST00000479161 CXXC5Q7LFL8 322 aaKnown RBP13.23□□□□□ -0.29
C9orf3-217ENST00000479161 DCXRQ7Z4W1 244 aa13.23□□□□□ -0.29
C9orf3-217ENST00000479161 LINC00346Q8IVM7 164 aa13.23□□□□□ -0.29
C9orf3-217ENST00000479161 PQLC1Q8N2U9 271 aa13.23□□□□□ -0.29
C9orf3-217ENST00000479161 ZNF786Q8N393 782 aa13.23□□□□□ -0.29
C9orf3-217ENST00000479161 OR10S1Q8NGN2 331 aa13.23□□□□□ -0.29
C9orf3-217ENST00000479161 C10orf105Q8TEF2 133 aa13.23□□□□□ -0.29
C9orf3-217ENST00000479161 SNX33Q8WV41 574 aa13.23□□□□□ -0.29
C9orf3-217ENST00000479161 TRUB1Q8WWH5 349 aaKnown RBP13.23□□□□□ -0.29
C9orf3-217ENST00000479161 FAM168AQ92567 244 aa13.23□□□□□ -0.29
C9orf3-217ENST00000479161 TVP23BQ9NYZ1 205 aa13.23□□□□□ -0.29
C9orf3-217ENST00000479161 MYEF2Q9P2K5 600 aaKnown RBP13.23□□□□□ -0.29
C9orf3-217ENST00000479161 ZDHHC8Q9ULC8 765 aa13.23□□□□□ -0.29
C9orf3-217ENST00000479161 STARD10Q9Y365 291 aa13.23□□□□□ -0.29
C9orf3-217ENST00000479161 CR1P17927 2039 aa13.22□□□□□ -0.29
C9orf3-217ENST00000479161 TVP23AA6NH52 213 aa13.22□□□□□ -0.29
C9orf3-217ENST00000479161 VWC2LB2RUY7 222 aa13.22□□□□□ -0.29
C9orf3-217ENST00000479161 ZNF878C9JN71 531 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms