RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 C9orf16Q9BUW7 83 aa5.93□□□□□ -1.46
BRCA1-215ENST00000478531 GABARAPL3Q9BY60 117 aa5.93□□□□□ -1.46
BRCA1-215ENST00000478531 GSX2Q9BZM3 304 aa5.93□□□□□ -1.46
BRCA1-215ENST00000478531 BCL2L14Q9BZR8 327 aa5.93□□□□□ -1.46
BRCA1-215ENST00000478531 HDHD2Q9H0R4 259 aa5.93□□□□□ -1.46
BRCA1-215ENST00000478531 CXXC4Q9H2H0 198 aa5.93□□□□□ -1.46
BRCA1-215ENST00000478531 TPK1Q9H3S4 243 aa5.93□□□□□ -1.46
BRCA1-215ENST00000478531 MYEF2Q9P2K5 600 aaKnown RBP5.93□□□□□ -1.46
BRCA1-215ENST00000478531 SVEP1Q4LDE5 3571 aa5.93□□□□□ -1.46
BRCA1-215ENST00000478531 ZAR1LA6NP61 321 aa5.93□□□□□ -1.46
BRCA1-215ENST00000478531 F5H5K5 113 aa5.93□□□□□ -1.46
BRCA1-215ENST00000478531 TLX2O43763 284 aaPredicted RBP5.93□□□□□ -1.46
BRCA1-215ENST00000478531 SELENOFO60613 162 aa5.93□□□□□ -1.46
BRCA1-215ENST00000478531 TMCC2O75069 709 aa5.93□□□□□ -1.46
BRCA1-215ENST00000478531 LY6HO94772 140 aa5.93□□□□□ -1.46
BRCA1-215ENST00000478531 GLCEO94923 617 aa5.93□□□□□ -1.46
BRCA1-215ENST00000478531 CLPTM1O96005 669 aa5.93□□□□□ -1.46
BRCA1-215ENST00000478531 NGFP01138 241 aa5.93□□□□□ -1.46
BRCA1-215ENST00000478531 MRPL3P09001 348 aaKnown RBP5.93□□□□□ -1.46
BRCA1-215ENST00000478531 COX5BP10606 129 aa5.93□□□□□ -1.46
BRCA1-215ENST00000478531 NF1P21359 2839 aa5.93□□□□□ -1.46
BRCA1-215ENST00000478531 PCSK6P29122 969 aa5.93□□□□□ -1.46
BRCA1-215ENST00000478531 ALDH3B1P43353 468 aa5.93□□□□□ -1.46
BRCA1-215ENST00000478531 SLC6A9P48067 706 aa5.93□□□□□ -1.46
BRCA1-215ENST00000478531 ALDH3A2P51648 485 aa5.93□□□□□ -1.46
BRCA1-215ENST00000478531 NUDT6P53370 316 aa5.93□□□□□ -1.46
BRCA1-215ENST00000478531 KLF3P57682 345 aaPredicted RBP5.93□□□□□ -1.46
BRCA1-215ENST00000478531 PPP1CBP62140 327 aa5.93□□□□□ -1.46
BRCA1-215ENST00000478531 EIF2B1Q14232 305 aaKnown RBP5.93□□□□□ -1.46
BRCA1-215ENST00000478531 MAD2L1BPQ15013 274 aaPredicted RBP5.93□□□□□ -1.46
BRCA1-215ENST00000478531 TRIP10Q15642 601 aa5.93□□□□□ -1.46
BRCA1-215ENST00000478531 EFNB3Q15768 340 aa5.93□□□□□ -1.46
BRCA1-215ENST00000478531 NKPD1Q17RQ9 610 aa5.93□□□□□ -1.46
BRCA1-215ENST00000478531 SWI5Q1ZZU3 235 aa5.93□□□□□ -1.46
BRCA1-215ENST00000478531 LINC01590Q5TEZ4 76 aa5.93□□□□□ -1.46
BRCA1-215ENST00000478531 SLX4IPQ5VYV7 408 aa5.93□□□□□ -1.46
BRCA1-215ENST00000478531 ARL9Q6T311 187 aa5.93□□□□□ -1.46
BRCA1-215ENST00000478531 DPY19L4Q7Z388 723 aa5.93□□□□□ -1.46
BRCA1-215ENST00000478531 LRRC75A-AS1Q8N1F1 130 aa5.93□□□□□ -1.46
BRCA1-215ENST00000478531 ZCCHC24Q8N2G6 241 aaKnown RBP5.93□□□□□ -1.46
BRCA1-215ENST00000478531 TCEANCQ8N8B7 351 aa5.93□□□□□ -1.46
BRCA1-215ENST00000478531 SYNPRQ8TBG9 265 aa5.93□□□□□ -1.46
BRCA1-215ENST00000478531 MAP6Q96JE9 813 aa5.93□□□□□ -1.46
BRCA1-215ENST00000478531 COPS4Q9BT78 406 aa5.93□□□□□ -1.46
BRCA1-215ENST00000478531 KRTAP3-3Q9BYR6 98 aa5.93□□□□□ -1.46
BRCA1-215ENST00000478531 KRTAP3-2Q9BYR7 98 aa5.93□□□□□ -1.46
BRCA1-215ENST00000478531 OR2J1Q9GZK6 312 aa5.93□□□□□ -1.46
BRCA1-215ENST00000478531 ELOVL3Q9HB03 270 aa5.93□□□□□ -1.46
BRCA1-215ENST00000478531 ZNF701Q9NV72 531 aaPredicted RBP5.93□□□□□ -1.46
BRCA1-215ENST00000478531 KCNG2Q9UJ96 466 aa5.93□□□□□ -1.46
BRCA1-215ENST00000478531 TMEM129A0AVI4 362 aa5.92□□□□□ -1.46
BRCA1-215ENST00000478531 H7C417 338 aa5.92□□□□□ -1.46
BRCA1-215ENST00000478531 M0R233 179 aa5.92□□□□□ -1.46
BRCA1-215ENST00000478531 PRODHO43272 600 aa5.92□□□□□ -1.46
BRCA1-215ENST00000478531 SSX4O60224 188 aa5.92□□□□□ -1.46
BRCA1-215ENST00000478531 ADRA2AP08913 450 aa5.92□□□□□ -1.46
BRCA1-215ENST00000478531 SLC2A5P22732 501 aa5.92□□□□□ -1.46
BRCA1-215ENST00000478531 GCH1P30793 250 aa5.92□□□□□ -1.46
BRCA1-215ENST00000478531 MPV17P39210 176 aa5.92□□□□□ -1.46
BRCA1-215ENST00000478531 BLVRAP53004 296 aa5.92□□□□□ -1.46
BRCA1-215ENST00000478531 RAD23AP54725 363 aa5.92□□□□□ -1.46
BRCA1-215ENST00000478531 SELENOVP59797 346 aa5.92□□□□□ -1.46
BRCA1-215ENST00000478531 HIST1H3AP68431 136 aa5.92□□□□□ -1.46
BRCA1-215ENST00000478531 TAF13Q15543 124 aa5.92□□□□□ -1.46
BRCA1-215ENST00000478531 CARTPTQ16568 116 aa5.92□□□□□ -1.46
BRCA1-215ENST00000478531 LRRC36Q1X8D7 754 aa5.92□□□□□ -1.46
BRCA1-215ENST00000478531 HIST2H3PS2Q5TEC6 136 aa5.92□□□□□ -1.46
BRCA1-215ENST00000478531 C12orf73Q69YU5 71 aa5.92□□□□□ -1.46
BRCA1-215ENST00000478531 UNQ6126/PRO20091Q6UXV3 157 aa5.92□□□□□ -1.46
BRCA1-215ENST00000478531 ZBTB49Q6ZSB9 765 aa5.92□□□□□ -1.46
BRCA1-215ENST00000478531 HIST2H3AQ71DI3 136 aa5.92□□□□□ -1.46
BRCA1-215ENST00000478531 KRTAP1-3Q8IUG1 177 aa5.92□□□□□ -1.46
BRCA1-215ENST00000478531 OR10S1Q8NGN2 331 aa5.92□□□□□ -1.46
BRCA1-215ENST00000478531 FAM81AQ8TBF8 368 aa5.92□□□□□ -1.46
BRCA1-215ENST00000478531 SLC25A40Q8TBP6 338 aa5.92□□□□□ -1.46
BRCA1-215ENST00000478531 IPCEF1Q8WWN9 437 aaPredicted RBP5.92□□□□□ -1.46
BRCA1-215ENST00000478531 Q96MF0 132 aa5.92□□□□□ -1.46
BRCA1-215ENST00000478531 SORCS2Q96PQ0 1159 aa5.92□□□□□ -1.46
BRCA1-215ENST00000478531 COQ7Q99807 217 aa5.92□□□□□ -1.46
BRCA1-215ENST00000478531 POFUT1Q9H488 388 aa5.92□□□□□ -1.46
BRCA1-215ENST00000478531 TOR3AQ9H497 397 aa5.92□□□□□ -1.46
BRCA1-215ENST00000478531 PNRC2Q9NPJ4 139 aaKnown RBP5.92□□□□□ -1.46
BRCA1-215ENST00000478531 CENPMQ9NSP4 180 aa5.92□□□□□ -1.46
BRCA1-215ENST00000478531 IMPAD1Q9NX62 359 aa5.92□□□□□ -1.46
BRCA1-215ENST00000478531 USE1Q9NZ43 259 aa5.92□□□□□ -1.46
BRCA1-215ENST00000478531 TAAR3PQ9P1P4 343 aa5.92□□□□□ -1.46
BRCA1-215ENST00000478531 ATPIF1Q9UII2 106 aa5.92□□□□□ -1.46
BRCA1-215ENST00000478531 N6AMT1Q9Y5N5 214 aa5.92□□□□□ -1.46
BRCA1-215ENST00000478531 CSPG4Q6UVK1 2322 aa5.92□□□□□ -1.46
BRCA1-215ENST00000478531 TRIM64A6NGJ6 449 aa5.91□□□□□ -1.46
BRCA1-215ENST00000478531 TRIM64BA6NI03 449 aa5.91□□□□□ -1.46
BRCA1-215ENST00000478531 ZNF878C9JN71 531 aa5.91□□□□□ -1.46
BRCA1-215ENST00000478531 NAT2P11245 290 aa5.91□□□□□ -1.46
BRCA1-215ENST00000478531 ANPEPP15144 967 aa5.91□□□□□ -1.46
BRCA1-215ENST00000478531 ZNF250P15622 560 aa5.91□□□□□ -1.46
BRCA1-215ENST00000478531 PAX1P15863 534 aa5.91□□□□□ -1.46
BRCA1-215ENST00000478531 PPOXP50336 477 aa5.91□□□□□ -1.46
BRCA1-215ENST00000478531 CDC42P60953 191 aa5.91□□□□□ -1.46
BRCA1-215ENST00000478531 HLXQ14774 488 aaPredicted RBP5.91□□□□□ -1.46
BRCA1-215ENST00000478531 ZNF718Q3SXZ3 478 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms