RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 SDR42E1Q8WUS8 393 aa3.08□□□□□ -1.92
FNDC3B-209ENST00000478016 TMEM170AQ8WVE7 144 aa3.08□□□□□ -1.92
FNDC3B-209ENST00000478016 ISOC2Q96AB3 205 aa3.08□□□□□ -1.92
FNDC3B-209ENST00000478016 VOPP1Q96AW1 172 aa3.08□□□□□ -1.92
FNDC3B-209ENST00000478016 ZHX1-C8orf76Q96EF9 292 aa3.08□□□□□ -1.92
FNDC3B-209ENST00000478016 SCRN2Q96FV2 425 aa3.08□□□□□ -1.92
FNDC3B-209ENST00000478016 CMTM7Q96FZ5 175 aa3.08□□□□□ -1.92
FNDC3B-209ENST00000478016 MED8Q96G25 268 aa3.08□□□□□ -1.92
FNDC3B-209ENST00000478016 TRIM51Q9BSJ1 452 aa3.08□□□□□ -1.92
FNDC3B-209ENST00000478016 PDCD10Q9BUL8 212 aa3.08□□□□□ -1.92
FNDC3B-209ENST00000478016 MS4A8Q9BY19 250 aa3.08□□□□□ -1.92
FNDC3B-209ENST00000478016 KRTAP9-8Q9BYQ0 159 aa3.08□□□□□ -1.92
FNDC3B-209ENST00000478016 SLC39A8Q9C0K1 460 aa3.08□□□□□ -1.92
FNDC3B-209ENST00000478016 LHPPQ9H008 270 aa3.08□□□□□ -1.92
FNDC3B-209ENST00000478016 DEFB129Q9H1M3 183 aa3.08□□□□□ -1.92
FNDC3B-209ENST00000478016 CDCP1Q9H5V8 836 aa3.08□□□□□ -1.92
FNDC3B-209ENST00000478016 UBE2ZQ9H832 354 aaPredicted RBP3.08□□□□□ -1.92
FNDC3B-209ENST00000478016 SPANXB1Q9NS25 103 aaPredicted RBP3.08□□□□□ -1.92
FNDC3B-209ENST00000478016 MED9Q9NWA0 146 aa3.08□□□□□ -1.92
FNDC3B-209ENST00000478016 PURGQ9UJV8 347 aaKnown RBP3.08□□□□□ -1.92
FNDC3B-209ENST00000478016 JPT1Q9UK76 154 aa3.08□□□□□ -1.92
FNDC3B-209ENST00000478016 VPREB3Q9UKI3 123 aa3.08□□□□□ -1.92
FNDC3B-209ENST00000478016 SIRT4Q9Y6E7 314 aaPredicted RBP3.08□□□□□ -1.92
FNDC3B-209ENST00000478016 NSD3Q9BZ95 1437 aa3.08□□□□□ -1.92
FNDC3B-209ENST00000478016 NAV1Q8NEY1 1877 aa3.07□□□□□ -1.92
FNDC3B-209ENST00000478016 A0A0A6YYD5 115 aa3.07□□□□□ -1.92
FNDC3B-209ENST00000478016 A0A0B4J2E0 115 aa3.07□□□□□ -1.92
FNDC3B-209ENST00000478016 A0A0G2JMP0 313 aa3.07□□□□□ -1.92
FNDC3B-209ENST00000478016 A0A0X1KG70 313 aa3.07□□□□□ -1.92
FNDC3B-209ENST00000478016 SMIM35A0A1B0GVV1 85 aa3.07□□□□□ -1.92
FNDC3B-209ENST00000478016 A0A1B0GX12 115 aa3.07□□□□□ -1.92
FNDC3B-209ENST00000478016 A0A1W2PPK0 400 aa3.07□□□□□ -1.92
FNDC3B-209ENST00000478016 ANTXRLA6NF34 631 aa3.07□□□□□ -1.92
FNDC3B-209ENST00000478016 ANKUB1A6NFN9 424 aa3.07□□□□□ -1.92
FNDC3B-209ENST00000478016 CCDC160A6NGH7 325 aa3.07□□□□□ -1.92
FNDC3B-209ENST00000478016 TRAPPC2LH3BP13 241 aa3.07□□□□□ -1.92
FNDC3B-209ENST00000478016 H7C2Y5 167 aa3.07□□□□□ -1.92
FNDC3B-209ENST00000478016 GPR31O00270 319 aa3.07□□□□□ -1.92
FNDC3B-209ENST00000478016 EPHB6O15197 1021 aa3.07□□□□□ -1.92
FNDC3B-209ENST00000478016 MSI1O43347 362 aaKnown RBP3.07□□□□□ -1.92
FNDC3B-209ENST00000478016 HSBP1O75506 76 aa3.07□□□□□ -1.92
FNDC3B-209ENST00000478016 TRMUO75648 421 aaKnown RBP3.07□□□□□ -1.92
FNDC3B-209ENST00000478016 S1PR2O95136 353 aa3.07□□□□□ -1.92
FNDC3B-209ENST00000478016 MT-CO2P00403 227 aa3.07□□□□□ -1.92
FNDC3B-209ENST00000478016 EGFP01133 1207 aa3.07□□□□□ -1.92
FNDC3B-209ENST00000478016 CD74P04233 296 aa3.07□□□□□ -1.92
FNDC3B-209ENST00000478016 IFNW1P05000 195 aa3.07□□□□□ -1.92
FNDC3B-209ENST00000478016 ZNF806P0C7X5 589 aa3.07□□□□□ -1.92
FNDC3B-209ENST00000478016 PRSS56P0CW18 603 aa3.07□□□□□ -1.92
FNDC3B-209ENST00000478016 TRAPPC2P0DI81 140 aa3.07□□□□□ -1.92
FNDC3B-209ENST00000478016 TRAPPC2BP0DI82 140 aa3.07□□□□□ -1.92
FNDC3B-209ENST00000478016 IFI30P13284 250 aa3.07□□□□□ -1.92
FNDC3B-209ENST00000478016 IMPDH1P20839 514 aa3.07□□□□□ -1.92
FNDC3B-209ENST00000478016 CXCR1P25024 350 aa3.07□□□□□ -1.92
FNDC3B-209ENST00000478016 PSMA1P25786 263 aaKnown RBP3.07□□□□□ -1.92
FNDC3B-209ENST00000478016 HTR1FP30939 366 aa3.07□□□□□ -1.92
FNDC3B-209ENST00000478016 ARRB2P32121 409 aa3.07□□□□□ -1.92
FNDC3B-209ENST00000478016 CCKARP32238 428 aa3.07□□□□□ -1.92
FNDC3B-209ENST00000478016 RBM34P42696 430 aaKnown RBP3.07□□□□□ -1.92
FNDC3B-209ENST00000478016 MAP2K4P45985 399 aa3.07□□□□□ -1.92
FNDC3B-209ENST00000478016 RPL21P46778 160 aaKnown RBP3.07□□□□□ -1.92
FNDC3B-209ENST00000478016 NOVA1P51513 510 aaKnown RBP3.07□□□□□ -1.92
FNDC3B-209ENST00000478016 CDH11P55287 796 aa3.07□□□□□ -1.92
FNDC3B-209ENST00000478016 OR2B8PP59922 312 aa3.07□□□□□ -1.92
FNDC3B-209ENST00000478016 NTHL1P78549 312 aa3.07□□□□□ -1.92
FNDC3B-209ENST00000478016 CDK3Q00526 305 aa3.07□□□□□ -1.92
FNDC3B-209ENST00000478016 HMGCS1Q01581 520 aa3.07□□□□□ -1.92
FNDC3B-209ENST00000478016 SLC10A7Q0GE19 358 aa3.07□□□□□ -1.92
FNDC3B-209ENST00000478016 ELAVL2Q12926 359 aaKnown RBP3.07□□□□□ -1.92
FNDC3B-209ENST00000478016 EXOSC2Q13868 293 aaKnown RBP3.07□□□□□ -1.92
FNDC3B-209ENST00000478016 OR8G1Q15617 311 aa3.07□□□□□ -1.92
FNDC3B-209ENST00000478016 ZNF77Q15935 545 aa3.07□□□□□ -1.92
FNDC3B-209ENST00000478016 ZNF239Q16600 458 aaKnown RBP3.07□□□□□ -1.92
FNDC3B-209ENST00000478016 PTGISQ16647 500 aa3.07□□□□□ -1.92
FNDC3B-209ENST00000478016 CTU2Q2VPK5 515 aaKnown RBP3.07□□□□□ -1.92
FNDC3B-209ENST00000478016 GGTA1PQ4G0N0 100 aa3.07□□□□□ -1.92
FNDC3B-209ENST00000478016 ACSF3Q4G176 576 aaPredicted RBP3.07□□□□□ -1.92
FNDC3B-209ENST00000478016 HSD17B12Q53GQ0 312 aa3.07□□□□□ -1.92
FNDC3B-209ENST00000478016 SPIN4Q56A73 249 aa3.07□□□□□ -1.92
FNDC3B-209ENST00000478016 LIPKQ5VXJ0 399 aa3.07□□□□□ -1.92
FNDC3B-209ENST00000478016 HIST2H2AA3Q6FI13 130 aa3.07□□□□□ -1.92
FNDC3B-209ENST00000478016 FAM166AQ6J272 317 aa3.07□□□□□ -1.92
FNDC3B-209ENST00000478016 AADACL2Q6P093 401 aa3.07□□□□□ -1.92
FNDC3B-209ENST00000478016 PLET1Q6UQ28 207 aa3.07□□□□□ -1.92
FNDC3B-209ENST00000478016 LINGO2Q7L985 606 aa3.07□□□□□ -1.92
FNDC3B-209ENST00000478016 ANKRD33Q7Z3H0 272 aa3.07□□□□□ -1.92
FNDC3B-209ENST00000478016 GOLGA7Q7Z5G4 137 aa3.07□□□□□ -1.92
FNDC3B-209ENST00000478016 TMPRSS12Q86WS5 348 aa3.07□□□□□ -1.92
FNDC3B-209ENST00000478016 CATSPER3Q86XQ3 398 aa3.07□□□□□ -1.92
FNDC3B-209ENST00000478016 GPSM1Q86YR5 675 aa3.07□□□□□ -1.92
FNDC3B-209ENST00000478016 C10orf107Q8IVU9 208 aa3.07□□□□□ -1.92
FNDC3B-209ENST00000478016 C4orf33Q8N1A6 199 aa3.07□□□□□ -1.92
FNDC3B-209ENST00000478016 LRRC25Q8N386 305 aaPredicted RBP3.07□□□□□ -1.92
FNDC3B-209ENST00000478016 C9orf62Q8N4C0 152 aa3.07□□□□□ -1.92
FNDC3B-209ENST00000478016 IQCF1Q8N6M8 205 aa3.07□□□□□ -1.92
FNDC3B-209ENST00000478016 ZNF676Q8N7Q3 588 aa3.07□□□□□ -1.92
FNDC3B-209ENST00000478016 NFAM1Q8NET5 270 aaPredicted RBP3.07□□□□□ -1.92
FNDC3B-209ENST00000478016 GPR32P1Q8NGA4 272 aa3.07□□□□□ -1.92
FNDC3B-209ENST00000478016 OR9Q2Q8NGE9 314 aa3.07□□□□□ -1.92
FNDC3B-209ENST00000478016 OR56A4Q8NGH8 313 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms