RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, human

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC7-222	ENST00000477937	CD55	P08174	381 aa		11.72	□□□□□ -0.53
HDAC7-222	ENST00000477937	DBH	P09172	617 aa		11.72	□□□□□ -0.53
HDAC7-222	ENST00000477937	KITLG	P21583	273 aa		11.72	□□□□□ -0.53
HDAC7-222	ENST00000477937	TNFSF4	P23510	183 aa		11.72	□□□□□ -0.53
HDAC7-222	ENST00000477937	LMO4	P61968	165 aa		11.72	□□□□□ -0.53
HDAC7-222	ENST00000477937	HIST1H3A	P68431	136 aa		11.72	□□□□□ -0.53
HDAC7-222	ENST00000477937	TNFAIP6	P98066	277 aa	Predicted RBP	11.72	□□□□□ -0.53
HDAC7-222	ENST00000477937	SLC3A1	Q07837	685 aa		11.72	□□□□□ -0.53
HDAC7-222	ENST00000477937	COX10	Q12887	443 aa		11.72	□□□□□ -0.53
HDAC7-222	ENST00000477937	CDK5R2	Q13319	367 aa		11.72	□□□□□ -0.53
HDAC7-222	ENST00000477937	AVPI1	Q5T686	147 aa		11.72	□□□□□ -0.53
HDAC7-222	ENST00000477937	HIST2H3PS2	Q5TEC6	136 aa		11.72	□□□□□ -0.53
HDAC7-222	ENST00000477937	OR2T5	Q6IEZ7	315 aa		11.72	□□□□□ -0.53
HDAC7-222	ENST00000477937	ZNF770	Q6IQ21	691 aa	Predicted RBP	11.72	□□□□□ -0.53
HDAC7-222	ENST00000477937	CORO6	Q6QEF8	472 aa		11.72	□□□□□ -0.53
HDAC7-222	ENST00000477937	RASSF6	Q6ZTQ3	369 aa		11.72	□□□□□ -0.53
HDAC7-222	ENST00000477937	HIST2H3A	Q71DI3	136 aa		11.72	□□□□□ -0.53
HDAC7-222	ENST00000477937	GLCCI1	Q86VQ1	547 aa		11.72	□□□□□ -0.53
HDAC7-222	ENST00000477937	SLC26A10	Q8NG04	563 aa		11.72	□□□□□ -0.53
HDAC7-222	ENST00000477937	OR4C15	Q8NGM1	316 aa		11.72	□□□□□ -0.53
HDAC7-222	ENST00000477937	OR2T29	Q8NH02	315 aa		11.72	□□□□□ -0.53
HDAC7-222	ENST00000477937	APOBEC3D	Q96AK3	386 aa	Predicted RBP	11.72	□□□□□ -0.53
HDAC7-222	ENST00000477937	HAVCR1	Q96D42	359 aa		11.72	□□□□□ -0.53
HDAC7-222	ENST00000477937	CMBL	Q96DG6	245 aa		11.72	□□□□□ -0.53
HDAC7-222	ENST00000477937	ASB9	Q96DX5	294 aa		11.72	□□□□□ -0.53
HDAC7-222	ENST00000477937	COQ7	Q99807	217 aa		11.72	□□□□□ -0.53
HDAC7-222	ENST00000477937	REEP1	Q9H902	201 aa		11.72	□□□□□ -0.53
HDAC7-222	ENST00000477937	TBC1D23	Q9NUY8	699 aa		11.72	□□□□□ -0.53
HDAC7-222	ENST00000477937	TAS2R1	Q9NYW7	299 aa		11.72	□□□□□ -0.53
HDAC7-222	ENST00000477937	SAMHD1	Q9Y3Z3	626 aa	Known RBP	11.72	□□□□□ -0.53
HDAC7-222	ENST00000477937	CACNG2	Q9Y698	323 aa		11.72	□□□□□ -0.53
HDAC7-222	ENST00000477937	CUBN	O60494	3623 aa		11.71	□□□□□ -0.53
HDAC7-222	ENST00000477937	RNF212B	A8MTL3	300 aa		11.71	□□□□□ -0.53
HDAC7-222	ENST00000477937	FAM157A	C9JC47	383 aa		11.71	□□□□□ -0.53
HDAC7-222	ENST00000477937	BHLHE40	O14503	412 aa		11.71	□□□□□ -0.53
HDAC7-222	ENST00000477937	UBOX5	O94941	541 aa		11.71	□□□□□ -0.53
HDAC7-222	ENST00000477937	MSMB	P08118	114 aa		11.71	□□□□□ -0.53
HDAC7-222	ENST00000477937	RAC2	P15153	192 aa		11.71	□□□□□ -0.53
HDAC7-222	ENST00000477937	TNFRSF1A	P19438	455 aa		11.71	□□□□□ -0.53
HDAC7-222	ENST00000477937	PPP1R8	Q12972	351 aa	Known RBP	11.71	□□□□□ -0.53
HDAC7-222	ENST00000477937	ECH1	Q13011	328 aa		11.71	□□□□□ -0.53
HDAC7-222	ENST00000477937	MICA	Q29983	383 aa		11.71	□□□□□ -0.53
HDAC7-222	ENST00000477937	PEG10	Q86TG7	708 aa	Known RBP	11.71	□□□□□ -0.53
HDAC7-222	ENST00000477937	AQP11	Q8NBQ7	271 aa		11.71	□□□□□ -0.53
HDAC7-222	ENST00000477937	OR2Z1	Q8NG97	314 aa		11.71	□□□□□ -0.53
HDAC7-222	ENST00000477937	OR2AJ1	Q8NGZ0	328 aa		11.71	□□□□□ -0.53
HDAC7-222	ENST00000477937	OR51F2	Q8NH61	342 aa		11.71	□□□□□ -0.53
HDAC7-222	ENST00000477937	SPATA3	Q8NHX4	192 aa		11.71	□□□□□ -0.53
HDAC7-222	ENST00000477937	TMEM158	Q8WZ71	300 aa		11.71	□□□□□ -0.53
HDAC7-222	ENST00000477937	TMEM186	Q96B77	213 aa		11.71	□□□□□ -0.53
HDAC7-222	ENST00000477937	CCDC124	Q96CT7	223 aa	Known RBP	11.71	□□□□□ -0.53
HDAC7-222	ENST00000477937	RAB39B	Q96DA2	213 aa		11.71	□□□□□ -0.53
HDAC7-222	ENST00000477937	PITX2	Q99697	317 aa		11.71	□□□□□ -0.53
HDAC7-222	ENST00000477937	THTPA	Q9BU02	230 aa		11.71	□□□□□ -0.53
HDAC7-222	ENST00000477937	FN3K	Q9H479	309 aa		11.71	□□□□□ -0.53
HDAC7-222	ENST00000477937	ZNF665	Q9H7R5	613 aa		11.71	□□□□□ -0.53
HDAC7-222	ENST00000477937	LPAR2	Q9HBW0	351 aa		11.71	□□□□□ -0.53
HDAC7-222	ENST00000477937	HIF1AN	Q9NWT6	349 aa		11.71	□□□□□ -0.53
HDAC7-222	ENST00000477937	WIPI2	Q9Y4P8	454 aa		11.71	□□□□□ -0.53
HDAC7-222	ENST00000477937		U3KQV3	271 aa		11.71	□□□□□ -0.53
HDAC7-222	ENST00000477937	FBN1	P35555	2871 aa	Known RBP	11.7	□□□□□ -0.54
HDAC7-222	ENST00000477937	SURF4	O15260	269 aa		11.7	□□□□□ -0.54
HDAC7-222	ENST00000477937	PHF1	O43189	567 aa	Predicted RBP	11.7	□□□□□ -0.54
HDAC7-222	ENST00000477937	RAP2A	P10114	183 aa		11.7	□□□□□ -0.54
HDAC7-222	ENST00000477937	ZNF823	P16415	610 aa		11.7	□□□□□ -0.54
HDAC7-222	ENST00000477937	SRP14	P37108	136 aa	Known RBP	11.7	□□□□□ -0.54
HDAC7-222	ENST00000477937	DBP	Q10586	325 aa	Predicted RBP	11.7	□□□□□ -0.54
HDAC7-222	ENST00000477937	TRAP1	Q12931	704 aa	Known RBP	11.7	□□□□□ -0.54
HDAC7-222	ENST00000477937	SLC18B1	Q6NT16	456 aa		11.7	□□□□□ -0.54
HDAC7-222	ENST00000477937	ACSM5	Q6NUN0	579 aa		11.7	□□□□□ -0.54
HDAC7-222	ENST00000477937	FBXW12	Q6X9E4	464 aa		11.7	□□□□□ -0.54
HDAC7-222	ENST00000477937	LINC00346	Q8IVM7	164 aa		11.7	□□□□□ -0.54
HDAC7-222	ENST00000477937	CYB561A3	Q8NBI2	242 aa		11.7	□□□□□ -0.54
HDAC7-222	ENST00000477937	OR2T4	Q8NH00	348 aa		11.7	□□□□□ -0.54
HDAC7-222	ENST00000477937	CLPTM1L	Q96KA5	538 aa		11.7	□□□□□ -0.54
HDAC7-222	ENST00000477937	ATF6B	Q99941	703 aa		11.7	□□□□□ -0.54
HDAC7-222	ENST00000477937	TSSK6	Q9BXA6	273 aa		11.7	□□□□□ -0.54
HDAC7-222	ENST00000477937	DGCR6L	Q9BY27	220 aa		11.7	□□□□□ -0.54
HDAC7-222	ENST00000477937	PLA2G12A	Q9BZM1	189 aa		11.7	□□□□□ -0.54
HDAC7-222	ENST00000477937	PTTG3P	Q9NZH4	202 aa		11.7	□□□□□ -0.54
HDAC7-222	ENST00000477937	IL19	Q9UHD0	177 aa		11.7	□□□□□ -0.54
HDAC7-222	ENST00000477937	CYB5R1	Q9UHQ9	305 aa		11.7	□□□□□ -0.54
HDAC7-222	ENST00000477937	KCNG2	Q9UJ96	466 aa		11.7	□□□□□ -0.54
HDAC7-222	ENST00000477937	BAIAP2	Q9UQB8	552 aa		11.7	□□□□□ -0.54
HDAC7-222	ENST00000477937	GK3P	Q14409	553 aa		11.69	□□□□□ -0.54
HDAC7-222	ENST00000477937	HLX	Q14774	488 aa	Predicted RBP	11.69	□□□□□ -0.54
HDAC7-222	ENST00000477937	RSPO1	Q2MKA7	263 aa	Predicted RBP	11.69	□□□□□ -0.54
HDAC7-222	ENST00000477937	ZNF362	Q5T0B9	420 aa	Predicted RBP	11.69	□□□□□ -0.54
HDAC7-222	ENST00000477937	CFAP77	Q6ZQR2	320 aa		11.69	□□□□□ -0.54
HDAC7-222	ENST00000477937		Q6ZR03	302 aa		11.69	□□□□□ -0.54
HDAC7-222	ENST00000477937	TRPM8	Q7Z2W7	1104 aa		11.69	□□□□□ -0.54
HDAC7-222	ENST00000477937	OR5AS1	Q8N127	324 aa		11.69	□□□□□ -0.54
HDAC7-222	ENST00000477937	LNX2	Q8N448	690 aa		11.69	□□□□□ -0.54
HDAC7-222	ENST00000477937	PROKR2	Q8NFJ6	384 aa		11.69	□□□□□ -0.54
HDAC7-222	ENST00000477937	OR8D4	Q8NGM9	314 aa		11.69	□□□□□ -0.54
HDAC7-222	ENST00000477937	BCAS4	Q8TDM0	211 aa		11.69	□□□□□ -0.54
HDAC7-222	ENST00000477937	ZNF582	Q96NG8	517 aa	Predicted RBP	11.69	□□□□□ -0.54
HDAC7-222	ENST00000477937	DDO	Q99489	341 aa		11.69	□□□□□ -0.54
HDAC7-222	ENST00000477937	GAL3ST1	Q99999	423 aa		11.69	□□□□□ -0.54
HDAC7-222	ENST00000477937	MRPL22	Q9NWU5	206 aa	Known RBP	11.69	□□□□□ -0.54

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