RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 SLC30A7Q8NEW0 376 aa14.06□□□□□ -0.16
VHL-203ENST00000477538 SNX33Q8WV41 574 aa14.06□□□□□ -0.16
VHL-203ENST00000477538 MRPL48Q96GC5 212 aaKnown RBP14.06□□□□□ -0.16
VHL-203ENST00000477538 ZNF649Q9BS31 505 aa14.06□□□□□ -0.16
VHL-203ENST00000477538 MROQ9BYG7 248 aa14.06□□□□□ -0.16
VHL-203ENST00000477538 CHCHD3Q9NX63 227 aaKnown RBP14.06□□□□□ -0.16
VHL-203ENST00000477538 SLCO1C1Q9NYB5 712 aa14.06□□□□□ -0.16
VHL-203ENST00000477538 LRP12Q9Y561 859 aa14.06□□□□□ -0.16
VHL-203ENST00000477538 A1L4Q6 167 aa14.05□□□□□ -0.16
VHL-203ENST00000477538 MAGEB4O15481 346 aaPredicted RBP14.05□□□□□ -0.16
VHL-203ENST00000477538 CLDN1O95832 211 aa14.05□□□□□ -0.16
VHL-203ENST00000477538 MT-ND2P03891 347 aa14.05□□□□□ -0.16
VHL-203ENST00000477538 KRT8P05787 483 aa14.05□□□□□ -0.16
VHL-203ENST00000477538 HSD11B1P28845 292 aa14.05□□□□□ -0.16
VHL-203ENST00000477538 GDI2P50395 445 aaKnown RBP14.05□□□□□ -0.16
VHL-203ENST00000477538 ACTA2P62736 377 aa14.05□□□□□ -0.16
VHL-203ENST00000477538 GRB2P62993 217 aaKnown RBP14.05□□□□□ -0.16
VHL-203ENST00000477538 ACTG2P63267 376 aa14.05□□□□□ -0.16
VHL-203ENST00000477538 ROM1Q03395 351 aa14.05□□□□□ -0.16
VHL-203ENST00000477538 TBC1D28Q2M2D7 210 aa14.05□□□□□ -0.16
VHL-203ENST00000477538 CDONQ4KMG0 1287 aa14.05□□□□□ -0.16
VHL-203ENST00000477538 DEGS2Q6QHC5 323 aa14.05□□□□□ -0.16
VHL-203ENST00000477538 MEX3BQ6ZN04 569 aaKnown RBP14.05□□□□□ -0.16
VHL-203ENST00000477538 PLEKHG7Q6ZR37 379 aa14.05□□□□□ -0.16
VHL-203ENST00000477538 PRSS48Q7RTY5 328 aa14.05□□□□□ -0.16
VHL-203ENST00000477538 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.05□□□□□ -0.16
VHL-203ENST00000477538 DMRTC2Q8IXT2 367 aaPredicted RBP14.05□□□□□ -0.16
VHL-203ENST00000477538 ZNF679Q8IYX0 411 aa14.05□□□□□ -0.16
VHL-203ENST00000477538 SLC7A6Q92536 515 aa14.05□□□□□ -0.16
VHL-203ENST00000477538 NR1H4Q96RI1 486 aaPredicted RBP14.05□□□□□ -0.16
VHL-203ENST00000477538 SIGLEC11Q96RL6 698 aa14.05□□□□□ -0.16
VHL-203ENST00000477538 MYCBPQ99417 103 aaPredicted RBP14.05□□□□□ -0.16
VHL-203ENST00000477538 CCDC90BQ9GZT6 254 aa14.05□□□□□ -0.16
VHL-203ENST00000477538 CRIM1Q9NZV1 1036 aa14.05□□□□□ -0.16
VHL-203ENST00000477538 FASNP49327 2511 aaKnown RBP14.05□□□□□ -0.16
VHL-203ENST00000477538 LOC100509620A0A075B734 347 aa14.04□□□□□ -0.16
VHL-203ENST00000477538 C5orf49A4QMS7 147 aa14.04□□□□□ -0.16
VHL-203ENST00000477538 CASKO14936 926 aa14.04□□□□□ -0.16
VHL-203ENST00000477538 ZNF254O75437 659 aa14.04□□□□□ -0.16
VHL-203ENST00000477538 HTR1AP08908 422 aa14.04□□□□□ -0.16
VHL-203ENST00000477538 DBHP09172 617 aa14.04□□□□□ -0.16
VHL-203ENST00000477538 CCL2P13500 99 aa14.04□□□□□ -0.16
VHL-203ENST00000477538 CRYGSP22914 178 aa14.04□□□□□ -0.16
VHL-203ENST00000477538 RIDAP52758 137 aaKnown RBP14.04□□□□□ -0.16
VHL-203ENST00000477538 GALK2Q01415 458 aa14.04□□□□□ -0.16
VHL-203ENST00000477538 TP53I3Q53FA7 332 aa14.04□□□□□ -0.16
VHL-203ENST00000477538 ZNF684Q5T5D7 378 aa14.04□□□□□ -0.16
VHL-203ENST00000477538 RNLSQ5VYX0 342 aa14.04□□□□□ -0.16
VHL-203ENST00000477538 TMEM108Q6UXF1 575 aa14.04□□□□□ -0.16
VHL-203ENST00000477538 FAM220AQ7Z4H9 259 aa14.04□□□□□ -0.16
VHL-203ENST00000477538 KLHL36Q8N4N3 616 aa14.04□□□□□ -0.16
VHL-203ENST00000477538 YIPF7Q8N8F6 280 aa14.04□□□□□ -0.16
VHL-203ENST00000477538 ACBD4Q8NC06 268 aa14.04□□□□□ -0.16
VHL-203ENST00000477538 OR1J2Q8NGS2 313 aa14.04□□□□□ -0.16
VHL-203ENST00000477538 SPTSSAQ969W0 71 aa14.04□□□□□ -0.16
VHL-203ENST00000477538 POM121L2Q96KW2 1035 aa14.04□□□□□ -0.16
VHL-203ENST00000477538 KCNJ15Q99712 375 aa14.04□□□□□ -0.16
VHL-203ENST00000477538 CDCA4Q9BXL8 241 aa14.04□□□□□ -0.16
VHL-203ENST00000477538 ELOVL3Q9HB03 270 aa14.04□□□□□ -0.16
VHL-203ENST00000477538 CDH20Q9HBT6 801 aa14.04□□□□□ -0.16
VHL-203ENST00000477538 CLEC2DQ9UHP7 191 aa14.04□□□□□ -0.16
VHL-203ENST00000477538 MRM2Q9UI43 246 aaKnown RBP14.04□□□□□ -0.16
VHL-203ENST00000477538 GNG8Q9UK08 70 aa14.04□□□□□ -0.16
VHL-203ENST00000477538 GCN1Q92616 2671 aaKnown RBP14.04□□□□□ -0.16
VHL-203ENST00000477538 ADGRG4Q8IZF6 3080 aa14.04□□□□□ -0.16
VHL-203ENST00000477538 ROS1P08922 2347 aa14.03□□□□□ -0.16
VHL-203ENST00000477538 METTL15A6NJ78 407 aa14.03□□□□□ -0.16
VHL-203ENST00000477538 F5H5K5 113 aa14.03□□□□□ -0.16
VHL-203ENST00000477538 J3QLW9 94 aa14.03□□□□□ -0.16
VHL-203ENST00000477538 M0R135 149 aa14.03□□□□□ -0.16
VHL-203ENST00000477538 MYL12BO14950 172 aa14.03□□□□□ -0.16
VHL-203ENST00000477538 MRPS14O60783 128 aaKnown RBP14.03□□□□□ -0.16
VHL-203ENST00000477538 SULT1C4O75897 302 aa14.03□□□□□ -0.16
VHL-203ENST00000477538 ABHD16AO95870 558 aa14.03□□□□□ -0.16
VHL-203ENST00000477538 EPXP11678 715 aa14.03□□□□□ -0.16
VHL-203ENST00000477538 ZNF19P17023 458 aa14.03□□□□□ -0.16
VHL-203ENST00000477538 CCNOP22674 350 aa14.03□□□□□ -0.16
VHL-203ENST00000477538 PTAFRP25105 342 aa14.03□□□□□ -0.16
VHL-203ENST00000477538 CD40P25942 277 aa14.03□□□□□ -0.16
VHL-203ENST00000477538 OTX1P32242 354 aaPredicted RBP14.03□□□□□ -0.16
VHL-203ENST00000477538 PRKXP51817 358 aa14.03□□□□□ -0.16
VHL-203ENST00000477538 CDH15P55291 814 aa14.03□□□□□ -0.16
VHL-203ENST00000477538 TPTEP56180 551 aa14.03□□□□□ -0.16
VHL-203ENST00000477538 NAAAQ02083 359 aa14.03□□□□□ -0.16
VHL-203ENST00000477538 RSPO1Q2MKA7 263 aaPredicted RBP14.03□□□□□ -0.16
VHL-203ENST00000477538 KRTAP27-1Q3LI81 207 aa14.03□□□□□ -0.16
VHL-203ENST00000477538 TMPRSS11AQ6ZMR5 421 aa14.03□□□□□ -0.16
VHL-203ENST00000477538 SYS1Q8N2H4 156 aa14.03□□□□□ -0.16
VHL-203ENST00000477538 ZNF283Q8N7M2 679 aa14.03□□□□□ -0.16
VHL-203ENST00000477538 IL17RDQ8NFM7 739 aa14.03□□□□□ -0.16
VHL-203ENST00000477538 FAM222BQ8WU58 562 aa14.03□□□□□ -0.16
VHL-203ENST00000477538 ZNF799Q96GE5 643 aa14.03□□□□□ -0.16
VHL-203ENST00000477538 C4orf36Q96KX1 117 aa14.03□□□□□ -0.16
VHL-203ENST00000477538 KCNS3Q9BQ31 491 aa14.03□□□□□ -0.16
VHL-203ENST00000477538 NIPAL2Q9H841 368 aa14.03□□□□□ -0.16
VHL-203ENST00000477538 ERGIC3Q9Y282 383 aa14.03□□□□□ -0.16
VHL-203ENST00000477538 CAB39Q9Y376 341 aaPredicted RBP14.03□□□□□ -0.16
VHL-203ENST00000477538 IGHV2OR16-5A0A0B4J2B6 119 aa14.02□□□□□ -0.17
VHL-203ENST00000477538 TMEM129A0AVI4 362 aa14.02□□□□□ -0.17
VHL-203ENST00000477538 DPRXA6NFQ7 191 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms