RNA–Protein interactions for RNA: ENST00000477531.3

CLDN11-204, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 1,065 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-204ENST00000477531 OR4K13Q8NH42 304 aa13.32□□□□□ -0.28
CLDN11-204ENST00000477531 SLC7A6Q92536 515 aa13.32□□□□□ -0.28
CLDN11-204ENST00000477531 SAMD8Q96LT4 415 aa13.32□□□□□ -0.28
CLDN11-204ENST00000477531 HDHD2Q9H0R4 259 aa13.32□□□□□ -0.28
CLDN11-204ENST00000477531 POFUT1Q9H488 388 aa13.32□□□□□ -0.28
CLDN11-204ENST00000477531 ARL8BQ9NVJ2 186 aa13.32□□□□□ -0.28
CLDN11-204ENST00000477531 NPTNQ9Y639 398 aa13.32□□□□□ -0.28
CLDN11-204ENST00000477531 J3QLI3 93 aa13.31□□□□□ -0.28
CLDN11-204ENST00000477531 DEAF1O75398 565 aaPredicted RBP13.31□□□□□ -0.28
CLDN11-204ENST00000477531 HLA-DQA2P01906 255 aa13.31□□□□□ -0.28
CLDN11-204ENST00000477531 SBK2P0C263 348 aa13.31□□□□□ -0.28
CLDN11-204ENST00000477531 GYS2P54840 703 aa13.31□□□□□ -0.28
CLDN11-204ENST00000477531 TSPAN31Q12999 210 aa13.31□□□□□ -0.28
CLDN11-204ENST00000477531 DCAF12L2Q5VW00 463 aa13.31□□□□□ -0.28
CLDN11-204ENST00000477531 SLC27A4Q6P1M0 643 aa13.31□□□□□ -0.28
CLDN11-204ENST00000477531 ZNF771Q7L3S4 317 aaPredicted RBP13.31□□□□□ -0.28
CLDN11-204ENST00000477531 PIGWQ7Z7B1 504 aa13.31□□□□□ -0.28
CLDN11-204ENST00000477531 LINC00471Q8N535 108 aa13.31□□□□□ -0.28
CLDN11-204ENST00000477531 ATG16L2Q8NAA4 619 aa13.31□□□□□ -0.28
CLDN11-204ENST00000477531 OR52L1Q8NGH7 329 aa13.31□□□□□ -0.28
CLDN11-204ENST00000477531 OR2AJ1Q8NGZ0 328 aa13.31□□□□□ -0.28
CLDN11-204ENST00000477531 ZNF418Q8TF45 676 aaPredicted RBP13.31□□□□□ -0.28
CLDN11-204ENST00000477531 APOBEC3DQ96AK3 386 aaPredicted RBP13.31□□□□□ -0.28
CLDN11-204ENST00000477531 TSSK2Q96PF2 358 aa13.31□□□□□ -0.28
CLDN11-204ENST00000477531 NMNAT3Q96T66 252 aa13.31□□□□□ -0.28
CLDN11-204ENST00000477531 COQ7Q99807 217 aa13.31□□□□□ -0.28
CLDN11-204ENST00000477531 TMEM106BQ9NUM4 274 aa13.31□□□□□ -0.28
CLDN11-204ENST00000477531 IL19Q9UHD0 177 aa13.31□□□□□ -0.28
CLDN11-204ENST00000477531 DBHP09172 617 aa13.3□□□□□ -0.28
CLDN11-204ENST00000477531 HIST1H1CP16403 213 aaKnown RBP13.3□□□□□ -0.28
CLDN11-204ENST00000477531 GATA3P23771 443 aa13.3□□□□□ -0.28
CLDN11-204ENST00000477531 GSSP48637 474 aa13.3□□□□□ -0.28
CLDN11-204ENST00000477531 MEP1BQ16820 701 aa13.3□□□□□ -0.28
CLDN11-204ENST00000477531 RPL13AP3Q6NVV1 102 aa13.3□□□□□ -0.28
CLDN11-204ENST00000477531 OR6V1Q8N148 313 aa13.3□□□□□ -0.28
CLDN11-204ENST00000477531 KLHL36Q8N4N3 616 aa13.3□□□□□ -0.28
CLDN11-204ENST00000477531 SPICQ8N5J4 248 aa13.3□□□□□ -0.28
CLDN11-204ENST00000477531 OR13G1Q8NGZ3 307 aa13.3□□□□□ -0.28
CLDN11-204ENST00000477531 ZNF582Q96NG8 517 aaPredicted RBP13.3□□□□□ -0.28
CLDN11-204ENST00000477531 PITX2Q99697 317 aa13.3□□□□□ -0.28
CLDN11-204ENST00000477531 RPRD1BQ9NQG5 326 aaKnown RBP13.3□□□□□ -0.28
CLDN11-204ENST00000477531 G6PC2Q9NQR9 355 aa13.3□□□□□ -0.28
CLDN11-204ENST00000477531 PTTG3PQ9NZH4 202 aa13.3□□□□□ -0.28
CLDN11-204ENST00000477531 PPP1R3CQ9UQK1 317 aa13.3□□□□□ -0.28
CLDN11-204ENST00000477531 LHFPL6Q9Y693 200 aa13.3□□□□□ -0.28
CLDN11-204ENST00000477531 FBN3Q75N90 2809 aa13.3□□□□□ -0.28
CLDN11-204ENST00000477531 IGLV1-36A0A0B4J1U3 117 aa13.29□□□□□ -0.28
CLDN11-204ENST00000477531 IFNL4K9M1U5 179 aa13.29□□□□□ -0.28
CLDN11-204ENST00000477531 TNFRSF11BO00300 401 aa13.29□□□□□ -0.28
CLDN11-204ENST00000477531 DCTN6O00399 190 aa13.29□□□□□ -0.28
CLDN11-204ENST00000477531 FOXH1O75593 365 aa13.29□□□□□ -0.28
CLDN11-204ENST00000477531 GPANK1O95872 356 aa13.29□□□□□ -0.28
CLDN11-204ENST00000477531 HIST1H3AP68431 136 aa13.29□□□□□ -0.28
CLDN11-204ENST00000477531 COX10Q12887 443 aa13.29□□□□□ -0.28
CLDN11-204ENST00000477531 ECH1Q13011 328 aa13.29□□□□□ -0.28
CLDN11-204ENST00000477531 HIST2H3PS2Q5TEC6 136 aa13.29□□□□□ -0.28
CLDN11-204ENST00000477531 OR2T2Q6IF00 324 aa13.29□□□□□ -0.28
CLDN11-204ENST00000477531 CORO6Q6QEF8 472 aa13.29□□□□□ -0.28
CLDN11-204ENST00000477531 FBXW12Q6X9E4 464 aa13.29□□□□□ -0.28
CLDN11-204ENST00000477531 ZNF620Q6ZNG0 422 aa13.29□□□□□ -0.28
CLDN11-204ENST00000477531 HIST2H3AQ71DI3 136 aa13.29□□□□□ -0.28
CLDN11-204ENST00000477531 OR5AS1Q8N127 324 aa13.29□□□□□ -0.28
CLDN11-204ENST00000477531 SDR9C7Q8NEX9 313 aa13.29□□□□□ -0.28
CLDN11-204ENST00000477531 SLC26A10Q8NG04 563 aa13.29□□□□□ -0.28
CLDN11-204ENST00000477531 NANPQ8TBE9 248 aa13.29□□□□□ -0.28
CLDN11-204ENST00000477531 ITLN1Q8WWA0 313 aa13.29□□□□□ -0.28
CLDN11-204ENST00000477531 OR2V2Q96R30 315 aa13.29□□□□□ -0.28
CLDN11-204ENST00000477531 HCAR1Q9BXC0 346 aa13.29□□□□□ -0.28
CLDN11-204ENST00000477531 WNK2Q9Y3S1 2297 aa13.29□□□□□ -0.28
CLDN11-204ENST00000477531 LOC105371242A0A075B767 164 aa13.28□□□□□ -0.28
CLDN11-204ENST00000477531 B2RBV5 119 aa13.28□□□□□ -0.28
CLDN11-204ENST00000477531 F5H5K5 113 aa13.28□□□□□ -0.28
CLDN11-204ENST00000477531 HAX1O00165 279 aa13.28□□□□□ -0.28
CLDN11-204ENST00000477531 ZNF823P16415 610 aa13.28□□□□□ -0.28
CLDN11-204ENST00000477531 SELEP16581 610 aa13.28□□□□□ -0.28
CLDN11-204ENST00000477531 SRP9P49458 86 aaKnown RBP13.28□□□□□ -0.28
CLDN11-204ENST00000477531 LCN2P80188 198 aa13.28□□□□□ -0.28
CLDN11-204ENST00000477531 HLXQ14774 488 aaPredicted RBP13.28□□□□□ -0.28
CLDN11-204ENST00000477531 SPRNQ5BIV9 151 aa13.28□□□□□ -0.28
CLDN11-204ENST00000477531 CLEC12AQ5QGZ9 265 aa13.28□□□□□ -0.28
CLDN11-204ENST00000477531 SLC35F1Q5T1Q4 408 aa13.28□□□□□ -0.28
CLDN11-204ENST00000477531 PGBD2Q6P3X8 592 aa13.28□□□□□ -0.28
CLDN11-204ENST00000477531 CYP2R1Q6VVX0 501 aa13.28□□□□□ -0.28
CLDN11-204ENST00000477531 Q6ZR03 302 aa13.28□□□□□ -0.28
CLDN11-204ENST00000477531 ZBTB46Q86UZ6 589 aa13.28□□□□□ -0.28
CLDN11-204ENST00000477531 ARHGAP24Q8N264 748 aa13.28□□□□□ -0.28
CLDN11-204ENST00000477531 ZNF283Q8N7M2 679 aa13.28□□□□□ -0.28
CLDN11-204ENST00000477531 OR8G5Q8NG78 346 aa13.28□□□□□ -0.28
CLDN11-204ENST00000477531 OR52E2Q8NGJ4 325 aa13.28□□□□□ -0.28
CLDN11-204ENST00000477531 C7orf69Q9H7B7 122 aa13.28□□□□□ -0.28
CLDN11-204ENST00000477531 ACTR3BQ9P1U1 418 aa13.28□□□□□ -0.28
CLDN11-204ENST00000477531 KCNG2Q9UJ96 466 aa13.28□□□□□ -0.28
CLDN11-204ENST00000477531 CDH10Q9Y6N8 788 aa13.28□□□□□ -0.28
CLDN11-204ENST00000477531 OR6C68A6NDL8 312 aa13.27□□□□□ -0.29
CLDN11-204ENST00000477531 IGHV2-70P01814 119 aa13.27□□□□□ -0.29
CLDN11-204ENST00000477531 EPHA1P21709 976 aa13.27□□□□□ -0.29
CLDN11-204ENST00000477531 HMGA2P52926 109 aa13.27□□□□□ -0.29
CLDN11-204ENST00000477531 BTG1P62324 171 aa13.27□□□□□ -0.29
CLDN11-204ENST00000477531 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.27□□□□□ -0.29
CLDN11-204ENST00000477531 MALLQ13021 153 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms