RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 LOXL3P58215 753 aa9.4□□□□□ -0.9
BRCA1-213ENST00000476777 VSNL1P62760 191 aa9.4□□□□□ -0.9
BRCA1-213ENST00000476777 EGR3Q06889 387 aa9.4□□□□□ -0.9
BRCA1-213ENST00000476777 TOP3AQ13472 1001 aaPredicted RBP9.4□□□□□ -0.9
BRCA1-213ENST00000476777 DHRS7BQ6IAN0 325 aaPredicted RBP9.4□□□□□ -0.9
BRCA1-213ENST00000476777 OR2T2Q6IF00 324 aa9.4□□□□□ -0.9
BRCA1-213ENST00000476777 BLOC1S3Q6QNY0 202 aa9.4□□□□□ -0.9
BRCA1-213ENST00000476777 VASH1Q7L8A9 365 aaPredicted RBP9.4□□□□□ -0.9
BRCA1-213ENST00000476777 NKAIN4Q8IVV8 208 aa9.4□□□□□ -0.9
BRCA1-213ENST00000476777 C11orf65Q8NCR3 313 aa9.4□□□□□ -0.9
BRCA1-213ENST00000476777 OR8G5Q8NG78 346 aa9.4□□□□□ -0.9
BRCA1-213ENST00000476777 FNDC8Q8TC99 324 aa9.4□□□□□ -0.9
BRCA1-213ENST00000476777 AENQ8WTP8 325 aaKnown RBP9.4□□□□□ -0.9
BRCA1-213ENST00000476777 TMEM255BQ8WV15 326 aa9.4□□□□□ -0.9
BRCA1-213ENST00000476777 SLC7A6Q92536 515 aa9.4□□□□□ -0.9
BRCA1-213ENST00000476777 WDFY2Q96P53 400 aa9.4□□□□□ -0.9
BRCA1-213ENST00000476777 WACQ9BTA9 647 aa9.4□□□□□ -0.9
BRCA1-213ENST00000476777 SIRPDQ9H106 197 aa9.4□□□□□ -0.9
BRCA1-213ENST00000476777 EMC7Q9NPA0 242 aa9.4□□□□□ -0.9
BRCA1-213ENST00000476777 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.4□□□□□ -0.9
BRCA1-213ENST00000476777 SGCEO43556 437 aa9.39□□□□□ -0.91
BRCA1-213ENST00000476777 FUT4P22083 530 aa9.39□□□□□ -0.91
BRCA1-213ENST00000476777 RBM34P42696 430 aaKnown RBP9.39□□□□□ -0.91
BRCA1-213ENST00000476777 GATA4P43694 442 aa9.39□□□□□ -0.91
BRCA1-213ENST00000476777 NPY4RP50391 375 aa9.39□□□□□ -0.91
BRCA1-213ENST00000476777 RPL27P61353 136 aaKnown RBP9.39□□□□□ -0.91
BRCA1-213ENST00000476777 SCRN3Q0VDG4 424 aa9.39□□□□□ -0.91
BRCA1-213ENST00000476777 COX10Q12887 443 aa9.39□□□□□ -0.91
BRCA1-213ENST00000476777 ALG10Q5BKT4 473 aa9.39□□□□□ -0.91
BRCA1-213ENST00000476777 TNFAIP8L3Q5GJ75 292 aa9.39□□□□□ -0.91
BRCA1-213ENST00000476777 VAX1Q5SQQ9 334 aa9.39□□□□□ -0.91
BRCA1-213ENST00000476777 METTL11BQ5VVY1 283 aa9.39□□□□□ -0.91
BRCA1-213ENST00000476777 CD276Q5ZPR3 534 aa9.39□□□□□ -0.91
BRCA1-213ENST00000476777 C1orf94Q6P1W5 598 aa9.39□□□□□ -0.91
BRCA1-213ENST00000476777 DLEU7Q6UYE1 221 aa9.39□□□□□ -0.91
BRCA1-213ENST00000476777 FBXW12Q6X9E4 464 aa9.39□□□□□ -0.91
BRCA1-213ENST00000476777 PCYOX1LQ8NBM8 494 aa9.39□□□□□ -0.91
BRCA1-213ENST00000476777 C19orf18Q8NEA5 215 aa9.39□□□□□ -0.91
BRCA1-213ENST00000476777 LHX4Q969G2 390 aa9.39□□□□□ -0.91
BRCA1-213ENST00000476777 TAMM41Q96BW9 452 aa9.39□□□□□ -0.91
BRCA1-213ENST00000476777 SPDL1Q96EA4 605 aa9.39□□□□□ -0.91
BRCA1-213ENST00000476777 ZNF582Q96NG8 517 aaPredicted RBP9.39□□□□□ -0.91
BRCA1-213ENST00000476777 TECTBQ96PL2 329 aa9.39□□□□□ -0.91
BRCA1-213ENST00000476777 CPPED1Q9BRF8 314 aaPredicted RBP9.39□□□□□ -0.91
BRCA1-213ENST00000476777 DPAGT1Q9H3H5 408 aa9.39□□□□□ -0.91
BRCA1-213ENST00000476777 CTSZQ9UBR2 303 aa9.39□□□□□ -0.91
BRCA1-213ENST00000476777 TMCC3Q9ULS5 477 aa9.39□□□□□ -0.91
BRCA1-213ENST00000476777 A0A1B0GWJ7 208 aa9.38□□□□□ -0.91
BRCA1-213ENST00000476777 OR6C6A6NF89 314 aa9.38□□□□□ -0.91
BRCA1-213ENST00000476777 J3QW42 95 aa9.38□□□□□ -0.91
BRCA1-213ENST00000476777 GPR37O15354 613 aa9.38□□□□□ -0.91
BRCA1-213ENST00000476777 VIMP08670 466 aaKnown RBP9.38□□□□□ -0.91
BRCA1-213ENST00000476777 CRYBA2P53672 197 aa9.38□□□□□ -0.91
BRCA1-213ENST00000476777 HOXA4Q00056 320 aaPredicted RBP9.38□□□□□ -0.91
BRCA1-213ENST00000476777 HERPUD1Q15011 391 aa9.38□□□□□ -0.91
BRCA1-213ENST00000476777 PDZD9Q8IXQ8 264 aa9.38□□□□□ -0.91
BRCA1-213ENST00000476777 ANKRD42Q8N9B4 389 aa9.38□□□□□ -0.91
BRCA1-213ENST00000476777 PNLDC1Q8NA58 520 aaKnown RBP9.38□□□□□ -0.91
BRCA1-213ENST00000476777 SCCPDHQ8NBX0 429 aa9.38□□□□□ -0.91
BRCA1-213ENST00000476777 Q8TCH9 128 aa9.38□□□□□ -0.91
BRCA1-213ENST00000476777 TMEM239Q8WW34 195 aa9.38□□□□□ -0.91
BRCA1-213ENST00000476777 LRTOMTQ8WZ04 291 aa9.38□□□□□ -0.91
BRCA1-213ENST00000476777 PPP1R14AQ96A00 147 aa9.38□□□□□ -0.91
BRCA1-213ENST00000476777 RASD2Q96D21 266 aa9.38□□□□□ -0.91
BRCA1-213ENST00000476777 PTTG3PQ9NZH4 202 aa9.38□□□□□ -0.91
BRCA1-213ENST00000476777 ERVK-18Q9QC07 812 aa9.38□□□□□ -0.91
BRCA1-213ENST00000476777 VPREB3Q9UKI3 123 aa9.38□□□□□ -0.91
BRCA1-213ENST00000476777 HIF3AQ9Y2N7 669 aa9.38□□□□□ -0.91
BRCA1-213ENST00000476777 IQCF6A8MYZ5 107 aa9.37□□□□□ -0.91
BRCA1-213ENST00000476777 HLA-DPB1P04440 258 aa9.37□□□□□ -0.91
BRCA1-213ENST00000476777 DBHP09172 617 aa9.37□□□□□ -0.91
BRCA1-213ENST00000476777 IRF2P14316 349 aa9.37□□□□□ -0.91
BRCA1-213ENST00000476777 TGFBR2P37173 567 aa9.37□□□□□ -0.91
BRCA1-213ENST00000476777 STX1BP61266 288 aa9.37□□□□□ -0.91
BRCA1-213ENST00000476777 MAB21L1Q13394 359 aa9.37□□□□□ -0.91
BRCA1-213ENST00000476777 CYP51A1Q16850 503 aa9.37□□□□□ -0.91
BRCA1-213ENST00000476777 CLEC12AQ5QGZ9 265 aa9.37□□□□□ -0.91
BRCA1-213ENST00000476777 EPGNQ6UW88 154 aa9.37□□□□□ -0.91
BRCA1-213ENST00000476777 Q6ZTK2 550 aa9.37□□□□□ -0.91
BRCA1-213ENST00000476777 PATL1Q86TB9 770 aaKnown RBP9.37□□□□□ -0.91
BRCA1-213ENST00000476777 IGFN1Q86VF2 1251 aa9.37□□□□□ -0.91
BRCA1-213ENST00000476777 LRRC75AQ8NAA5 344 aa9.37□□□□□ -0.91
BRCA1-213ENST00000476777 BHLHE23Q8NDY6 225 aa9.37□□□□□ -0.91
BRCA1-213ENST00000476777 OR5L1Q8NGL2 311 aa9.37□□□□□ -0.91
BRCA1-213ENST00000476777 LRRC8CQ8TDW0 803 aa9.37□□□□□ -0.91
BRCA1-213ENST00000476777 MMADHCQ9H3L0 296 aaPredicted RBP9.37□□□□□ -0.91
BRCA1-213ENST00000476777 SMURF1Q9HCE7 757 aa9.37□□□□□ -0.91
BRCA1-213ENST00000476777 TMEM100Q9NV29 134 aa9.37□□□□□ -0.91
BRCA1-213ENST00000476777 CCDC167Q9P0B6 97 aa9.37□□□□□ -0.91
BRCA1-213ENST00000476777 STAB2Q8WWQ8 2551 aa9.36□□□□□ -0.91
BRCA1-213ENST00000476777 A6NIZ1 184 aa9.36□□□□□ -0.91
BRCA1-213ENST00000476777 H7C1C5 153 aa9.36□□□□□ -0.91
BRCA1-213ENST00000476777 FBP2O00757 339 aa9.36□□□□□ -0.91
BRCA1-213ENST00000476777 FAM20BO75063 409 aa9.36□□□□□ -0.91
BRCA1-213ENST00000476777 FCN3O75636 299 aa9.36□□□□□ -0.91
BRCA1-213ENST00000476777 OR5F1O95221 314 aa9.36□□□□□ -0.91
BRCA1-213ENST00000476777 VSIG8P0DPA2 414 aa9.36□□□□□ -0.91
BRCA1-213ENST00000476777 RGS6P49758 472 aa9.36□□□□□ -0.91
BRCA1-213ENST00000476777 RAD23AP54725 363 aa9.36□□□□□ -0.91
BRCA1-213ENST00000476777 TAS2R41P59536 307 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms