RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 K7N7A8 449 aa3.27□□□□□ -1.89
VPS13D-207ENST00000476169 GABRPO00591 440 aa3.27□□□□□ -1.89
VPS13D-207ENST00000476169 ITGB1BP1O14713 200 aa3.27□□□□□ -1.89
VPS13D-207ENST00000476169 TNFSF11O14788 317 aa3.27□□□□□ -1.89
VPS13D-207ENST00000476169 AGPAT2O15120 278 aa3.27□□□□□ -1.89
VPS13D-207ENST00000476169 LINC01565O15544 149 aa3.27□□□□□ -1.89
VPS13D-207ENST00000476169 COCHO43405 550 aa3.27□□□□□ -1.89
VPS13D-207ENST00000476169 ZMPSTE24O75844 475 aa3.27□□□□□ -1.89
VPS13D-207ENST00000476169 AIFM1O95831 613 aa3.27□□□□□ -1.89
VPS13D-207ENST00000476169 PNMA6AP0CW24 399 aaPredicted RBP3.27□□□□□ -1.89
VPS13D-207ENST00000476169 PGAM2P15259 253 aa3.27□□□□□ -1.89
VPS13D-207ENST00000476169 FOLR1P15328 257 aa3.27□□□□□ -1.89
VPS13D-207ENST00000476169 GGT1P19440 569 aa3.27□□□□□ -1.89
VPS13D-207ENST00000476169 AQP1P29972 269 aa3.27□□□□□ -1.89
VPS13D-207ENST00000476169 FMO3P31513 532 aa3.27□□□□□ -1.89
VPS13D-207ENST00000476169 KDELR2P33947 212 aa3.27□□□□□ -1.89
VPS13D-207ENST00000476169 P2RY2P41231 377 aa3.27□□□□□ -1.89
VPS13D-207ENST00000476169 MAGEA6P43360 314 aa3.27□□□□□ -1.89
VPS13D-207ENST00000476169 KIR2DS4P43632 304 aa3.27□□□□□ -1.89
VPS13D-207ENST00000476169 CDC34P49427 236 aaPredicted RBP3.27□□□□□ -1.89
VPS13D-207ENST00000476169 TAS2R60P59551 318 aa3.27□□□□□ -1.89
VPS13D-207ENST00000476169 IFFO1Q0D2I5 559 aa3.27□□□□□ -1.89
VPS13D-207ENST00000476169 C2orf80Q0P641 193 aa3.27□□□□□ -1.89
VPS13D-207ENST00000476169 MAD2L1BPQ15013 274 aaPredicted RBP3.27□□□□□ -1.89
VPS13D-207ENST00000476169 OR7A5Q15622 319 aa3.27□□□□□ -1.89
VPS13D-207ENST00000476169 C1orf146Q5VVC0 180 aa3.27□□□□□ -1.89
VPS13D-207ENST00000476169 C11orf71Q6IPW1 123 aa3.27□□□□□ -1.89
VPS13D-207ENST00000476169 RWDD4Q6NW29 188 aaKnown RBP3.27□□□□□ -1.89
VPS13D-207ENST00000476169 ZNF620Q6ZNG0 422 aa3.27□□□□□ -1.89
VPS13D-207ENST00000476169 AHSA2Q719I0 299 aa3.27□□□□□ -1.89
VPS13D-207ENST00000476169 ABHD13Q7L211 337 aa3.27□□□□□ -1.89
VPS13D-207ENST00000476169 MRPL55Q7Z7F7 128 aaKnown RBP3.27□□□□□ -1.89
VPS13D-207ENST00000476169 TMEM135Q86UB9 458 aa3.27□□□□□ -1.89
VPS13D-207ENST00000476169 CDC20BQ86Y33 519 aa3.27□□□□□ -1.89
VPS13D-207ENST00000476169 CCDC71LQ8N9Z2 235 aa3.27□□□□□ -1.89
VPS13D-207ENST00000476169 OR10G3Q8NGC4 313 aa3.27□□□□□ -1.89
VPS13D-207ENST00000476169 OR2A1Q8NGT9 310 aa3.27□□□□□ -1.89
VPS13D-207ENST00000476169 OR51A7Q8NH64 312 aa3.27□□□□□ -1.89
VPS13D-207ENST00000476169 IL22RA2Q969J5 263 aa3.27□□□□□ -1.89
VPS13D-207ENST00000476169 ZNF75AQ96N20 296 aa3.27□□□□□ -1.89
VPS13D-207ENST00000476169 ZNF251Q9BRH9 671 aa3.27□□□□□ -1.89
VPS13D-207ENST00000476169 DCUN1D5Q9BTE7 237 aa3.27□□□□□ -1.89
VPS13D-207ENST00000476169 ANGPTL4Q9BY76 406 aa3.27□□□□□ -1.89
VPS13D-207ENST00000476169 FGFBP2Q9BYJ0 223 aa3.27□□□□□ -1.89
VPS13D-207ENST00000476169 HEXA-AS1Q9H8Q6 139 aa3.27□□□□□ -1.89
VPS13D-207ENST00000476169 RMND1Q9NWS8 449 aa3.27□□□□□ -1.89
VPS13D-207ENST00000476169 SDHAF2Q9NX18 166 aa3.27□□□□□ -1.89
VPS13D-207ENST00000476169 QPCTLQ9NXS2 382 aa3.27□□□□□ -1.89
VPS13D-207ENST00000476169 SLC39A1Q9NY26 324 aa3.27□□□□□ -1.89
VPS13D-207ENST00000476169 CTSZQ9UBR2 303 aa3.27□□□□□ -1.89
VPS13D-207ENST00000476169 ZNF256Q9Y2P7 627 aaPredicted RBP3.27□□□□□ -1.89
VPS13D-207ENST00000476169 PUS1Q9Y606 427 aaKnown RBP eCLIP3.27□□□□□ -1.89
VPS13D-207ENST00000476169 NOTCH4Q99466 2003 aa3.27□□□□□ -1.89
VPS13D-207ENST00000476169 MED14O60244 1454 aa3.27□□□□□ -1.89
VPS13D-207ENST00000476169 SETD5Q9C0A6 1442 aa3.27□□□□□ -1.89
VPS13D-207ENST00000476169 ADCY9O60503 1353 aa3.26□□□□□ -1.89
VPS13D-207ENST00000476169 PLEKHG1Q9ULL1 1385 aa3.26□□□□□ -1.89
VPS13D-207ENST00000476169 GAKO14976 1311 aa3.26□□□□□ -1.89
VPS13D-207ENST00000476169 EFCAB6Q5THR3 1501 aa3.26□□□□□ -1.89
VPS13D-207ENST00000476169 LRRC7Q96NW7 1537 aa3.26□□□□□ -1.89
VPS13D-207ENST00000476169 IGHV1OR15-1A0A075B7D0 117 aa3.26□□□□□ -1.89
VPS13D-207ENST00000476169 A0A0A6YYH2 397 aa3.26□□□□□ -1.89
VPS13D-207ENST00000476169 A0A0B4J2A0 478 aa3.26□□□□□ -1.89
VPS13D-207ENST00000476169 A0A0G2JLM5 398 aa3.26□□□□□ -1.89
VPS13D-207ENST00000476169 A6NJ64 397 aa3.26□□□□□ -1.89
VPS13D-207ENST00000476169 ERVV-1B6SEH8 477 aa3.26□□□□□ -1.89
VPS13D-207ENST00000476169 F8VP50 259 aa3.26□□□□□ -1.89
VPS13D-207ENST00000476169 PRAMEF26H0Y7S4 382 aa3.26□□□□□ -1.89
VPS13D-207ENST00000476169 H7C2Y5 167 aa3.26□□□□□ -1.89
VPS13D-207ENST00000476169 DFFAO00273 331 aa3.26□□□□□ -1.89
VPS13D-207ENST00000476169 SULT1C2O00338 296 aa3.26□□□□□ -1.89
VPS13D-207ENST00000476169 NME4O00746 187 aa3.26□□□□□ -1.89
VPS13D-207ENST00000476169 B4GALT5O43286 388 aa3.26□□□□□ -1.89
VPS13D-207ENST00000476169 ZG16O60844 167 aa3.26□□□□□ -1.89
VPS13D-207ENST00000476169 ZNF253O75346 499 aa3.26□□□□□ -1.89
VPS13D-207ENST00000476169 RDH16O75452 317 aa3.26□□□□□ -1.89
VPS13D-207ENST00000476169 CRLF1O75462 422 aa3.26□□□□□ -1.89
VPS13D-207ENST00000476169 RCBTB2O95199 551 aa3.26□□□□□ -1.89
VPS13D-207ENST00000476169 IGKV3-20P01619 116 aa3.26□□□□□ -1.89
VPS13D-207ENST00000476169 OR8U9P0C7N5 309 aa3.26□□□□□ -1.89
VPS13D-207ENST00000476169 RAB4AP20338 218 aa3.26□□□□□ -1.89
VPS13D-207ENST00000476169 SERPINB5P36952 375 aa3.26□□□□□ -1.89
VPS13D-207ENST00000476169 CRIP2P52943 208 aaPredicted RBP3.26□□□□□ -1.89
VPS13D-207ENST00000476169 HILS1P60008 231 aa3.26□□□□□ -1.89
VPS13D-207ENST00000476169 RPL31P62899 125 aaKnown RBP3.26□□□□□ -1.89
VPS13D-207ENST00000476169 CTAG1AP78358 180 aa3.26□□□□□ -1.89
VPS13D-207ENST00000476169 UNC119Q13432 240 aa3.26□□□□□ -1.89
VPS13D-207ENST00000476169 ASAH1Q13510 395 aa3.26□□□□□ -1.89
VPS13D-207ENST00000476169 RUNX3Q13761 415 aa3.26□□□□□ -1.89
VPS13D-207ENST00000476169 OR4D1Q15615 310 aa3.26□□□□□ -1.89
VPS13D-207ENST00000476169 ZNF726P1Q15940 193 aa3.26□□□□□ -1.89
VPS13D-207ENST00000476169 ZSCAN26Q16670 478 aa3.26□□□□□ -1.89
VPS13D-207ENST00000476169 LRRC36Q1X8D7 754 aa3.26□□□□□ -1.89
VPS13D-207ENST00000476169 C2CD6Q53TS8 623 aa3.26□□□□□ -1.89
VPS13D-207ENST00000476169 CCNJQ5T5M9 372 aa3.26□□□□□ -1.89
VPS13D-207ENST00000476169 LCE1AQ5T7P2 110 aa3.26□□□□□ -1.89
VPS13D-207ENST00000476169 CPTPQ5TA50 214 aa3.26□□□□□ -1.89
VPS13D-207ENST00000476169 UBE2UQ5VVX9 321 aa3.26□□□□□ -1.89
VPS13D-207ENST00000476169 THOC7Q6I9Y2 204 aaKnown RBP3.26□□□□□ -1.89
VPS13D-207ENST00000476169 CXCL17Q6UXB2 119 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms