RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 C5orf63A6NC05 138 aa5.89□□□□□ -1.47
HDAC3-207ENST00000475549 UNC119BA6NIH7 251 aa5.89□□□□□ -1.47
HDAC3-207ENST00000475549 POM121CA8CG34 1229 aa5.89□□□□□ -1.47
HDAC3-207ENST00000475549 F5H0A9 414 aaPredicted RBP5.89□□□□□ -1.47
HDAC3-207ENST00000475549 TMEM178BH3BS89 294 aa5.89□□□□□ -1.47
HDAC3-207ENST00000475549 TRIM77I1YAP6 450 aa5.89□□□□□ -1.47
HDAC3-207ENST00000475549 XKRYO14609 159 aa5.89□□□□□ -1.47
HDAC3-207ENST00000475549 GSTA4O15217 222 aa5.89□□□□□ -1.47
HDAC3-207ENST00000475549 MLNRO43193 412 aa5.89□□□□□ -1.47
HDAC3-207ENST00000475549 CCDC22O60826 627 aa5.89□□□□□ -1.47
HDAC3-207ENST00000475549 PPP1R3DO95685 299 aa5.89□□□□□ -1.47
HDAC3-207ENST00000475549 SEMG1P04279 462 aa5.89□□□□□ -1.47
HDAC3-207ENST00000475549 WNT2P09544 360 aa5.89□□□□□ -1.47
HDAC3-207ENST00000475549 RAC2P15153 192 aa5.89□□□□□ -1.47
HDAC3-207ENST00000475549 RHCEP18577 417 aa5.89□□□□□ -1.47
HDAC3-207ENST00000475549 TUBG1P23258 451 aa5.89□□□□□ -1.47
HDAC3-207ENST00000475549 GATA3P23771 443 aa5.89□□□□□ -1.47
HDAC3-207ENST00000475549 CD80P33681 288 aa5.89□□□□□ -1.47
HDAC3-207ENST00000475549 MSX2P35548 267 aaPredicted RBP5.89□□□□□ -1.47
HDAC3-207ENST00000475549 GGT2P36268 569 aa5.89□□□□□ -1.47
HDAC3-207ENST00000475549 HTR5AP47898 357 aa5.89□□□□□ -1.47
HDAC3-207ENST00000475549 NUDT2P50583 147 aa5.89□□□□□ -1.47
HDAC3-207ENST00000475549 MMP16P51512 607 aa5.89□□□□□ -1.47
HDAC3-207ENST00000475549 PSME3P61289 254 aa5.89□□□□□ -1.47
HDAC3-207ENST00000475549 BTG1P62324 171 aa5.89□□□□□ -1.47
HDAC3-207ENST00000475549 UBA52P62987 128 aaKnown RBP5.89□□□□□ -1.47
HDAC3-207ENST00000475549 PAX8Q06710 450 aa5.89□□□□□ -1.47
HDAC3-207ENST00000475549 SLC3A1Q07837 685 aa5.89□□□□□ -1.47
HDAC3-207ENST00000475549 SCRN3Q0VDG4 424 aa5.89□□□□□ -1.47
HDAC3-207ENST00000475549 AQP6Q13520 282 aa5.89□□□□□ -1.47
HDAC3-207ENST00000475549 RFX4Q33E94 735 aa5.89□□□□□ -1.47
HDAC3-207ENST00000475549 TMEM155Q4W5P6 130 aa5.89□□□□□ -1.47
HDAC3-207ENST00000475549 FAM201AQ5SY85 155 aa5.89□□□□□ -1.47
HDAC3-207ENST00000475549 GPR139Q6DWJ6 353 aa5.89□□□□□ -1.47
HDAC3-207ENST00000475549 OR2T2Q6IF00 324 aa5.89□□□□□ -1.47
HDAC3-207ENST00000475549 ARL9Q6T311 187 aa5.89□□□□□ -1.47
HDAC3-207ENST00000475549 FBXW12Q6X9E4 464 aa5.89□□□□□ -1.47
HDAC3-207ENST00000475549 DPY19L2P2Q6ZN68 376 aa5.89□□□□□ -1.47
HDAC3-207ENST00000475549 OR5AS1Q8N127 324 aa5.89□□□□□ -1.47
HDAC3-207ENST00000475549 SIGLECL1Q8N7X8 197 aa5.89□□□□□ -1.47
HDAC3-207ENST00000475549 NPEPL1Q8NDH3 523 aa5.89□□□□□ -1.47
HDAC3-207ENST00000475549 OR10AD1Q8NGE0 317 aa5.89□□□□□ -1.47
HDAC3-207ENST00000475549 ZNF420Q8TAQ5 688 aaPredicted RBP5.89□□□□□ -1.47
HDAC3-207ENST00000475549 ZNRF4Q8WWF5 429 aa5.89□□□□□ -1.47
HDAC3-207ENST00000475549 GCDHQ92947 438 aaPredicted RBP5.89□□□□□ -1.47
HDAC3-207ENST00000475549 FAM162AQ96A26 154 aa5.89□□□□□ -1.47
HDAC3-207ENST00000475549 DACT3Q96B18 629 aaPredicted RBP5.89□□□□□ -1.47
HDAC3-207ENST00000475549 RSRC1Q96IZ7 334 aaKnown RBP5.89□□□□□ -1.47
HDAC3-207ENST00000475549 OR2V2Q96R30 315 aa5.89□□□□□ -1.47
HDAC3-207ENST00000475549 NMNAT3Q96T66 252 aa5.89□□□□□ -1.47
HDAC3-207ENST00000475549 DDOQ99489 341 aa5.89□□□□□ -1.47
HDAC3-207ENST00000475549 KCTD14Q9BQ13 255 aaPredicted RBP5.89□□□□□ -1.47
HDAC3-207ENST00000475549 RERGLQ9H628 205 aa5.89□□□□□ -1.47
HDAC3-207ENST00000475549 WDR76Q9H967 626 aa5.89□□□□□ -1.47
HDAC3-207ENST00000475549 TMEM165Q9HC07 324 aa5.89□□□□□ -1.47
HDAC3-207ENST00000475549 PNRC2Q9NPJ4 139 aaKnown RBP5.89□□□□□ -1.47
HDAC3-207ENST00000475549 TUBG2Q9NRH3 451 aa5.89□□□□□ -1.47
HDAC3-207ENST00000475549 ZNF69Q9UC07 566 aa5.89□□□□□ -1.47
HDAC3-207ENST00000475549 IL19Q9UHD0 177 aa5.89□□□□□ -1.47
HDAC3-207ENST00000475549 B9D1Q9UPM9 204 aa5.89□□□□□ -1.47
HDAC3-207ENST00000475549 PPP1R3CQ9UQK1 317 aa5.89□□□□□ -1.47
HDAC3-207ENST00000475549 INSIG2Q9Y5U4 225 aa5.89□□□□□ -1.47
HDAC3-207ENST00000475549 TRRAPQ9Y4A5 3859 aa5.88□□□□□ -1.47
HDAC3-207ENST00000475549 OR6C68A6NDL8 312 aa5.88□□□□□ -1.47
HDAC3-207ENST00000475549 CEACAM18A8MTB9 384 aa5.88□□□□□ -1.47
HDAC3-207ENST00000475549 A8MXK9 166 aa5.88□□□□□ -1.47
HDAC3-207ENST00000475549 F5H5P2 479 aa5.88□□□□□ -1.47
HDAC3-207ENST00000475549 FOXH1O75593 365 aa5.88□□□□□ -1.47
HDAC3-207ENST00000475549 CYB5R3P00387 301 aaPredicted RBP5.88□□□□□ -1.47
HDAC3-207ENST00000475549 HLA-DPB1P04440 258 aa5.88□□□□□ -1.47
HDAC3-207ENST00000475549 PSKH1P11801 424 aa5.88□□□□□ -1.47
HDAC3-207ENST00000475549 HIST1H1CP16403 213 aaKnown RBP5.88□□□□□ -1.47
HDAC3-207ENST00000475549 ZNF12P17014 697 aa5.88□□□□□ -1.47
HDAC3-207ENST00000475549 TNFRSF1AP19438 455 aa5.88□□□□□ -1.47
HDAC3-207ENST00000475549 GSTM3P21266 225 aa5.88□□□□□ -1.47
HDAC3-207ENST00000475549 ACTG1P63261 375 aa5.88□□□□□ -1.47
HDAC3-207ENST00000475549 COX10Q12887 443 aa5.88□□□□□ -1.47
HDAC3-207ENST00000475549 MAB21L1Q13394 359 aa5.88□□□□□ -1.47
HDAC3-207ENST00000475549 AWAT1Q58HT5 328 aa5.88□□□□□ -1.47
HDAC3-207ENST00000475549 ZMAT1Q5H9K5 638 aa5.88□□□□□ -1.47
HDAC3-207ENST00000475549 FGD3Q5JSP0 725 aa5.88□□□□□ -1.47
HDAC3-207ENST00000475549 ZNF362Q5T0B9 420 aaPredicted RBP5.88□□□□□ -1.47
HDAC3-207ENST00000475549 SLC18B1Q6NT16 456 aa5.88□□□□□ -1.47
HDAC3-207ENST00000475549 SMARCD3Q6STE5 483 aa5.88□□□□□ -1.47
HDAC3-207ENST00000475549 CFAP77Q6ZQR2 320 aa5.88□□□□□ -1.47
HDAC3-207ENST00000475549 RRM2BQ7LG56 351 aa5.88□□□□□ -1.47
HDAC3-207ENST00000475549 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.88□□□□□ -1.47
HDAC3-207ENST00000475549 ADCK1Q86TW2 530 aa5.88□□□□□ -1.47
HDAC3-207ENST00000475549 ZBTB46Q86UZ6 589 aa5.88□□□□□ -1.47
HDAC3-207ENST00000475549 JAZF1Q86VZ6 243 aa5.88□□□□□ -1.47
HDAC3-207ENST00000475549 TEX29Q8N6K0 151 aa5.88□□□□□ -1.47
HDAC3-207ENST00000475549 ATG16L2Q8NAA4 619 aa5.88□□□□□ -1.47
HDAC3-207ENST00000475549 SLC26A10Q8NG04 563 aa5.88□□□□□ -1.47
HDAC3-207ENST00000475549 OR8G5Q8NG78 346 aa5.88□□□□□ -1.47
HDAC3-207ENST00000475549 OR10S1Q8NGN2 331 aa5.88□□□□□ -1.47
HDAC3-207ENST00000475549 OR4K13Q8NH42 304 aa5.88□□□□□ -1.47
HDAC3-207ENST00000475549 MAP6Q96JE9 813 aa5.88□□□□□ -1.47
HDAC3-207ENST00000475549 MEGF10Q96KG7 1140 aa5.88□□□□□ -1.47
HDAC3-207ENST00000475549 ERMAPQ96PL5 475 aaPredicted RBP5.88□□□□□ -1.47
HDAC3-207ENST00000475549 DUX5Q96PT3 197 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms