RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 CIARTQ8N365 385 aaPredicted RBP13.61□□□□□ -0.23
CPSF3-203ENST00000475482 OR6N1Q8NGY5 312 aa13.61□□□□□ -0.23
CPSF3-203ENST00000475482 OR52N5Q8NH56 324 aa13.61□□□□□ -0.23
CPSF3-203ENST00000475482 HAVCR2Q8TDQ0 301 aa13.61□□□□□ -0.23
CPSF3-203ENST00000475482 POM121Q96HA1 1249 aa13.61□□□□□ -0.23
CPSF3-203ENST00000475482 Q96MF0 132 aa13.61□□□□□ -0.23
CPSF3-203ENST00000475482 TSSK2Q96PF2 358 aa13.61□□□□□ -0.23
CPSF3-203ENST00000475482 MGLLQ99685 303 aa13.61□□□□□ -0.23
CPSF3-203ENST00000475482 SMR3AQ99954 134 aa13.61□□□□□ -0.23
CPSF3-203ENST00000475482 MARCH7Q9H992 704 aa13.61□□□□□ -0.23
CPSF3-203ENST00000475482 SLC17A5Q9NRA2 495 aa13.61□□□□□ -0.23
CPSF3-203ENST00000475482 UPB1Q9UBR1 384 aa13.61□□□□□ -0.23
CPSF3-203ENST00000475482 IGLV1-36A0A0B4J1U3 117 aa13.6□□□□□ -0.23
CPSF3-203ENST00000475482 ZNF701M0R085 212 aaPredicted RBP13.6□□□□□ -0.23
CPSF3-203ENST00000475482 ABCD4O14678 606 aa13.6□□□□□ -0.23
CPSF3-203ENST00000475482 MT-ND5P03915 603 aa13.6□□□□□ -0.23
CPSF3-203ENST00000475482 LIMS3P0CW19 117 aa13.6□□□□□ -0.23
CPSF3-203ENST00000475482 LIMS4P0CW20 117 aa13.6□□□□□ -0.23
CPSF3-203ENST00000475482 HSMCR30P0CW71 290 aa13.6□□□□□ -0.23
CPSF3-203ENST00000475482 CTLA4P16410 223 aa13.6□□□□□ -0.23
CPSF3-203ENST00000475482 ZNF823P16415 610 aa13.6□□□□□ -0.23
CPSF3-203ENST00000475482 CD40P25942 277 aa13.6□□□□□ -0.23
CPSF3-203ENST00000475482 NAA10P41227 235 aaPredicted RBP13.6□□□□□ -0.23
CPSF3-203ENST00000475482 BDH1Q02338 343 aa13.6□□□□□ -0.23
CPSF3-203ENST00000475482 TGFBR3Q03167 851 aa13.6□□□□□ -0.23
CPSF3-203ENST00000475482 MLLT11Q13015 90 aaPredicted RBP13.6□□□□□ -0.23
CPSF3-203ENST00000475482 HIST3H3Q16695 136 aa13.6□□□□□ -0.23
CPSF3-203ENST00000475482 ARMCX4Q5H9R4 360 aa13.6□□□□□ -0.23
CPSF3-203ENST00000475482 TMEM108Q6UXF1 575 aa13.6□□□□□ -0.23
CPSF3-203ENST00000475482 KCTD20Q7Z5Y7 419 aa13.6□□□□□ -0.23
CPSF3-203ENST00000475482 ERI1Q8IV48 349 aaKnown RBP13.6□□□□□ -0.23
CPSF3-203ENST00000475482 GLB1L2Q8IW92 636 aa13.6□□□□□ -0.23
CPSF3-203ENST00000475482 SNX33Q8WV41 574 aa13.6□□□□□ -0.23
CPSF3-203ENST00000475482 TMIGD2Q96BF3 282 aa13.6□□□□□ -0.23
CPSF3-203ENST00000475482 OR2M2Q96R28 347 aa13.6□□□□□ -0.23
CPSF3-203ENST00000475482 TRAF4Q9BUZ4 470 aaPredicted RBP13.6□□□□□ -0.23
CPSF3-203ENST00000475482 ALG8Q9BVK2 526 aa13.6□□□□□ -0.23
CPSF3-203ENST00000475482 WDR76Q9H967 626 aa13.6□□□□□ -0.23
CPSF3-203ENST00000475482 CISD1Q9NZ45 108 aaKnown RBP13.6□□□□□ -0.23
CPSF3-203ENST00000475482 GLTPQ9NZD2 209 aa13.6□□□□□ -0.23
CPSF3-203ENST00000475482 CLEC2DQ9UHP7 191 aa13.6□□□□□ -0.23
CPSF3-203ENST00000475482 KCNG2Q9UJ96 466 aa13.6□□□□□ -0.23
CPSF3-203ENST00000475482 LSM2Q9Y333 95 aaKnown RBP13.6□□□□□ -0.23
CPSF3-203ENST00000475482 A0A1W2PR80 420 aa13.59□□□□□ -0.23
CPSF3-203ENST00000475482 FAM171A2A8MVW0 826 aa13.59□□□□□ -0.23
CPSF3-203ENST00000475482 DCTN6O00399 190 aa13.59□□□□□ -0.23
CPSF3-203ENST00000475482 SELENOPP49908 381 aa13.59□□□□□ -0.23
CPSF3-203ENST00000475482 ZNF84P51523 738 aa13.59□□□□□ -0.23
CPSF3-203ENST00000475482 GTF2A1P52655 376 aaPredicted RBP13.59□□□□□ -0.23
CPSF3-203ENST00000475482 TMBIM6P55061 237 aa13.59□□□□□ -0.23
CPSF3-203ENST00000475482 GP2P55259 537 aaKnown RBP13.59□□□□□ -0.23
CPSF3-203ENST00000475482 ATP5J2P56134 94 aa13.59□□□□□ -0.23
CPSF3-203ENST00000475482 TAS2R43P59537 309 aa13.59□□□□□ -0.23
CPSF3-203ENST00000475482 ACSM1Q08AH1 577 aa13.59□□□□□ -0.23
CPSF3-203ENST00000475482 MRPL28Q13084 256 aaKnown RBP13.59□□□□□ -0.23
CPSF3-203ENST00000475482 TIMM50Q3ZCQ8 353 aa13.59□□□□□ -0.23
CPSF3-203ENST00000475482 CARD17Q5XLA6 110 aa13.59□□□□□ -0.23
CPSF3-203ENST00000475482 CLVS1Q8IUQ0 354 aaPredicted RBP13.59□□□□□ -0.23
CPSF3-203ENST00000475482 TIGD4Q8IY51 512 aa13.59□□□□□ -0.23
CPSF3-203ENST00000475482 SYS1Q8N2H4 156 aa13.59□□□□□ -0.23
CPSF3-203ENST00000475482 ZNF454Q8N9F8 522 aa13.59□□□□□ -0.23
CPSF3-203ENST00000475482 ZNF511Q8NB15 262 aa13.59□□□□□ -0.23
CPSF3-203ENST00000475482 OR10H5Q8NGA6 315 aa13.59□□□□□ -0.23
CPSF3-203ENST00000475482 OR6N2Q8NGY6 317 aa13.59□□□□□ -0.23
CPSF3-203ENST00000475482 ASB17Q8WXJ9 295 aa13.59□□□□□ -0.23
CPSF3-203ENST00000475482 TMEM54Q969K7 222 aa13.59□□□□□ -0.23
CPSF3-203ENST00000475482 BCL7BQ9BQE9 202 aa13.59□□□□□ -0.23
CPSF3-203ENST00000475482 LINC00470Q9BZP3 86 aa13.59□□□□□ -0.23
CPSF3-203ENST00000475482 RSL24D1Q9UHA3 163 aaKnown RBP13.59□□□□□ -0.23
CPSF3-203ENST00000475482 LAMP5Q9UJQ1 280 aa13.59□□□□□ -0.23
CPSF3-203ENST00000475482 COA3Q9Y2R0 106 aaPredicted RBP13.59□□□□□ -0.23
CPSF3-203ENST00000475482 AMDHD2Q9Y303 409 aa13.59□□□□□ -0.23
CPSF3-203ENST00000475482 ARFGEF3Q5TH69 2177 aa13.59□□□□□ -0.23
CPSF3-203ENST00000475482 A0A1W2PQL4 384 aaPredicted RBP13.58□□□□□ -0.24
CPSF3-203ENST00000475482 TRIM64BA6NI03 449 aa13.58□□□□□ -0.24
CPSF3-203ENST00000475482 H7C1Q1 480 aa13.58□□□□□ -0.24
CPSF3-203ENST00000475482 CCRL2O00421 344 aa13.58□□□□□ -0.24
CPSF3-203ENST00000475482 SELENOFO60613 162 aa13.58□□□□□ -0.24
CPSF3-203ENST00000475482 SCG5P05408 212 aa13.58□□□□□ -0.24
CPSF3-203ENST00000475482 QDPRP09417 244 aa13.58□□□□□ -0.24
CPSF3-203ENST00000475482 TACSTD2P09758 323 aa13.58□□□□□ -0.24
CPSF3-203ENST00000475482 LAP3P28838 519 aa13.58□□□□□ -0.24
CPSF3-203ENST00000475482 ENTPD1P49961 510 aa13.58□□□□□ -0.24
CPSF3-203ENST00000475482 ZNF83P51522 516 aa13.58□□□□□ -0.24
CPSF3-203ENST00000475482 ZNF133P52736 654 aaPredicted RBP13.58□□□□□ -0.24
CPSF3-203ENST00000475482 TEX30Q5JUR7 227 aa13.58□□□□□ -0.24
CPSF3-203ENST00000475482 C9orf135Q5VTT2 229 aa13.58□□□□□ -0.24
CPSF3-203ENST00000475482 GPR107Q5VW38 600 aa13.58□□□□□ -0.24
CPSF3-203ENST00000475482 SLC25A47Q6Q0C1 308 aa13.58□□□□□ -0.24
CPSF3-203ENST00000475482 ZNF322Q6U7Q0 402 aaPredicted RBP13.58□□□□□ -0.24
CPSF3-203ENST00000475482 PLEKHG7Q6ZR37 379 aa13.58□□□□□ -0.24
CPSF3-203ENST00000475482 DNM1P46Q6ZS02 220 aa13.58□□□□□ -0.24
CPSF3-203ENST00000475482 LINGO2Q7L985 606 aa13.58□□□□□ -0.24
CPSF3-203ENST00000475482 FAM220AQ7Z4H9 259 aa13.58□□□□□ -0.24
CPSF3-203ENST00000475482 ABHD12BQ7Z5M8 362 aaPredicted RBP13.58□□□□□ -0.24
CPSF3-203ENST00000475482 C20orf196Q8IYI0 205 aa13.58□□□□□ -0.24
CPSF3-203ENST00000475482 TMEM123Q8N131 208 aa13.58□□□□□ -0.24
CPSF3-203ENST00000475482 GPR137CQ8N3F9 429 aa13.58□□□□□ -0.24
CPSF3-203ENST00000475482 RAB2BQ8WUD1 216 aa13.58□□□□□ -0.24
CPSF3-203ENST00000475482 MCHR2Q969V1 340 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms