RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 HDHD2Q9H0R4 259 aa12.06□□□□□ -0.48
TRAF4-210ENST00000475329 PPIL3Q9H2H8 161 aaKnown RBP12.06□□□□□ -0.48
TRAF4-210ENST00000475329 SMURF1Q9HCE7 757 aa12.06□□□□□ -0.48
TRAF4-210ENST00000475329 NOX4Q9NPH5 578 aa12.06□□□□□ -0.48
TRAF4-210ENST00000475329 MALT1Q9UDY8 824 aa12.06□□□□□ -0.48
TRAF4-210ENST00000475329 CACNA1GO43497 2377 aa12.06□□□□□ -0.48
TRAF4-210ENST00000475329 SMIM30A4D0T7 59 aa12.05□□□□□ -0.48
TRAF4-210ENST00000475329 ACOD1A6NK06 481 aa12.05□□□□□ -0.48
TRAF4-210ENST00000475329 SGCEO43556 437 aa12.05□□□□□ -0.48
TRAF4-210ENST00000475329 DOK2O60496 412 aa12.05□□□□□ -0.48
TRAF4-210ENST00000475329 WDR1O75083 606 aa12.05□□□□□ -0.48
TRAF4-210ENST00000475329 CTSSP25774 331 aa12.05□□□□□ -0.48
TRAF4-210ENST00000475329 S100A5P33763 92 aa12.05□□□□□ -0.48
TRAF4-210ENST00000475329 PTGER4P35408 488 aa12.05□□□□□ -0.48
TRAF4-210ENST00000475329 CX3CR1P49238 355 aa12.05□□□□□ -0.48
TRAF4-210ENST00000475329 FAPQ12884 760 aa12.05□□□□□ -0.48
TRAF4-210ENST00000475329 ECH1Q13011 328 aa12.05□□□□□ -0.48
TRAF4-210ENST00000475329 GUSBP1Q15486 140 aa12.05□□□□□ -0.48
TRAF4-210ENST00000475329 LINC00303Q3SY05 128 aa12.05□□□□□ -0.48
TRAF4-210ENST00000475329 TMEM244Q5VVB8 128 aa12.05□□□□□ -0.48
TRAF4-210ENST00000475329 ZNF324BQ6AW86 544 aaPredicted RBP12.05□□□□□ -0.48
TRAF4-210ENST00000475329 FAM214BQ7L5A3 538 aa12.05□□□□□ -0.48
TRAF4-210ENST00000475329 ZNF627Q7L945 461 aa12.05□□□□□ -0.48
TRAF4-210ENST00000475329 SLC16A14Q7RTX9 510 aa12.05□□□□□ -0.48
TRAF4-210ENST00000475329 CROCCP3Q8IVE0 287 aa12.05□□□□□ -0.48
TRAF4-210ENST00000475329 ZNF283Q8N7M2 679 aa12.05□□□□□ -0.48
TRAF4-210ENST00000475329 Q8NA96 180 aa12.05□□□□□ -0.48
TRAF4-210ENST00000475329 C9orf106Q8NAJ2 232 aa12.05□□□□□ -0.48
TRAF4-210ENST00000475329 S100ZQ8WXG8 99 aa12.05□□□□□ -0.48
TRAF4-210ENST00000475329 KCNS3Q9BQ31 491 aa12.05□□□□□ -0.48
TRAF4-210ENST00000475329 PBOV1Q9GZY1 135 aa12.05□□□□□ -0.48
TRAF4-210ENST00000475329 PLEK2Q9NYT0 353 aa12.05□□□□□ -0.48
TRAF4-210ENST00000475329 NUFIP1Q9UHK0 495 aaKnown RBP12.05□□□□□ -0.48
TRAF4-210ENST00000475329 PRSS50Q9UI38 385 aa12.05□□□□□ -0.48
TRAF4-210ENST00000475329 SLC5A6Q9Y289 635 aa12.05□□□□□ -0.48
TRAF4-210ENST00000475329 PEX16Q9Y5Y5 336 aa12.05□□□□□ -0.48
TRAF4-210ENST00000475329 ACACBO00763 2458 aa12.05□□□□□ -0.48
TRAF4-210ENST00000475329 TRBV5-7A0A0A0MS05 114 aa12.04□□□□□ -0.48
TRAF4-210ENST00000475329 LOC107986453A0A1B0GWG9 222 aa12.04□□□□□ -0.48
TRAF4-210ENST00000475329 A0A1W2PPK0 400 aa12.04□□□□□ -0.48
TRAF4-210ENST00000475329 FIGNL2A6NMB9 653 aa12.04□□□□□ -0.48
TRAF4-210ENST00000475329 NCR1O76036 304 aa12.04□□□□□ -0.48
TRAF4-210ENST00000475329 APOC1P02654 83 aa12.04□□□□□ -0.48
TRAF4-210ENST00000475329 RAF1P04049 648 aa12.04□□□□□ -0.48
TRAF4-210ENST00000475329 ISG15P05161 165 aa12.04□□□□□ -0.48
TRAF4-210ENST00000475329 TPOP07202 933 aa12.04□□□□□ -0.48
TRAF4-210ENST00000475329 ZNF32P17041 273 aa12.04□□□□□ -0.48
TRAF4-210ENST00000475329 CFL1P23528 166 aaKnown RBP12.04□□□□□ -0.48
TRAF4-210ENST00000475329 MPGP29372 298 aa12.04□□□□□ -0.48
TRAF4-210ENST00000475329 SOX2P48431 317 aa12.04□□□□□ -0.48
TRAF4-210ENST00000475329 PRKXP51817 358 aa12.04□□□□□ -0.48
TRAF4-210ENST00000475329 ZNF121P58317 390 aaPredicted RBP12.04□□□□□ -0.48
TRAF4-210ENST00000475329 C9orf135Q5VTT2 229 aa12.04□□□□□ -0.48
TRAF4-210ENST00000475329 FBXW9Q5XUX1 488 aa12.04□□□□□ -0.48
TRAF4-210ENST00000475329 TFAP2EQ6VUC0 442 aa12.04□□□□□ -0.48
TRAF4-210ENST00000475329 SKA3Q8IX90 412 aa12.04□□□□□ -0.48
TRAF4-210ENST00000475329 ELMOD2Q8IZ81 293 aa12.04□□□□□ -0.48
TRAF4-210ENST00000475329 RDH10Q8IZV5 341 aa12.04□□□□□ -0.48
TRAF4-210ENST00000475329 GCNT2Q8N0V5 402 aa12.04□□□□□ -0.48
TRAF4-210ENST00000475329 OR6K3Q8NGY3 331 aa12.04□□□□□ -0.48
TRAF4-210ENST00000475329 OR10AC1Q8NH08 325 aa12.04□□□□□ -0.48
TRAF4-210ENST00000475329 SPTSSAQ969W0 71 aa12.04□□□□□ -0.48
TRAF4-210ENST00000475329 PPP1R14AQ96A00 147 aa12.04□□□□□ -0.48
TRAF4-210ENST00000475329 OR2H1Q9GZK4 316 aa12.04□□□□□ -0.48
TRAF4-210ENST00000475329 SLITRK2Q9H156 845 aa12.04□□□□□ -0.48
TRAF4-210ENST00000475329 HMG20AQ9NP66 347 aa12.04□□□□□ -0.48
TRAF4-210ENST00000475329 BRD7Q9NPI1 651 aa12.04□□□□□ -0.48
TRAF4-210ENST00000475329 AKIP1Q9NQ31 210 aa12.04□□□□□ -0.48
TRAF4-210ENST00000475329 PLEKHB1Q9UF11 243 aaPredicted RBP12.04□□□□□ -0.48
TRAF4-210ENST00000475329 HHLA2Q9UM44 414 aa12.04□□□□□ -0.48
TRAF4-210ENST00000475329 DHDHQ9UQ10 334 aa12.04□□□□□ -0.48
TRAF4-210ENST00000475329 TIMM10BQ9Y5J6 103 aa12.04□□□□□ -0.48
TRAF4-210ENST00000475329 SVILO95425 2214 aa12.03□□□□□ -0.48
TRAF4-210ENST00000475329 LOC400499M0QZD8 3231 aa12.03□□□□□ -0.48
TRAF4-210ENST00000475329 MBD3L4A6NDZ8 208 aaPredicted RBP12.03□□□□□ -0.48
TRAF4-210ENST00000475329 MBD3L3A6NE82 208 aaPredicted RBP12.03□□□□□ -0.48
TRAF4-210ENST00000475329 MBD3L5A6NJ08 208 aaPredicted RBP12.03□□□□□ -0.48
TRAF4-210ENST00000475329 PDCD5O14737 125 aa12.03□□□□□ -0.48
TRAF4-210ENST00000475329 PIN1P1O15428 100 aa12.03□□□□□ -0.48
TRAF4-210ENST00000475329 SYNGR3O43761 229 aa12.03□□□□□ -0.48
TRAF4-210ENST00000475329 TTRP02766 147 aa12.03□□□□□ -0.48
TRAF4-210ENST00000475329 CD2P06729 351 aa12.03□□□□□ -0.48
TRAF4-210ENST00000475329 ANXA2P07355 339 aaKnown RBP12.03□□□□□ -0.48
TRAF4-210ENST00000475329 INHBBP09529 407 aa12.03□□□□□ -0.48
TRAF4-210ENST00000475329 ABOP16442 354 aa12.03□□□□□ -0.48
TRAF4-210ENST00000475329 RAB3BP20337 219 aa12.03□□□□□ -0.48
TRAF4-210ENST00000475329 BMXP51813 675 aa12.03□□□□□ -0.48
TRAF4-210ENST00000475329 TDGF1P3P51864 188 aa12.03□□□□□ -0.48
TRAF4-210ENST00000475329 CAV3P56539 151 aa12.03□□□□□ -0.48
TRAF4-210ENST00000475329 GALK2Q01415 458 aa12.03□□□□□ -0.48
TRAF4-210ENST00000475329 DYNC1I2Q13409 638 aaKnown RBP12.03□□□□□ -0.48
TRAF4-210ENST00000475329 ZNF846Q147U1 533 aa12.03□□□□□ -0.48
TRAF4-210ENST00000475329 SLC36A2Q495M3 483 aa12.03□□□□□ -0.48
TRAF4-210ENST00000475329 C1orf185Q5T7R7 199 aa12.03□□□□□ -0.48
TRAF4-210ENST00000475329 CD163Q86VB7 1156 aa12.03□□□□□ -0.48
TRAF4-210ENST00000475329 CISD2Q8N5K1 135 aaKnown RBP12.03□□□□□ -0.48
TRAF4-210ENST00000475329 CNEP1R1Q8N9A8 125 aa12.03□□□□□ -0.48
TRAF4-210ENST00000475329 KDF1Q8NAX2 398 aaPredicted RBP12.03□□□□□ -0.48
TRAF4-210ENST00000475329 OR51A4Q8NGJ6 313 aa12.03□□□□□ -0.48
TRAF4-210ENST00000475329 OR13C3Q8NGS6 347 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms