RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 TSSK2Q96PF2 358 aa12.95□□□□□ -0.34
VARS-223ENST00000474643 FN3KQ9H479 309 aa12.95□□□□□ -0.34
VARS-223ENST00000474643 RNPEPL1Q9HAU8 725 aa12.95□□□□□ -0.34
VARS-223ENST00000474643 ENOPH1Q9UHY7 261 aa12.95□□□□□ -0.34
VARS-223ENST00000474643 BAIAP2Q9UQB8 552 aa12.95□□□□□ -0.34
VARS-223ENST00000474643 TIMM10BQ9Y5J6 103 aa12.95□□□□□ -0.34
VARS-223ENST00000474643 C5orf49A4QMS7 147 aa12.94□□□□□ -0.34
VARS-223ENST00000474643 BHLHE40O14503 412 aa12.94□□□□□ -0.34
VARS-223ENST00000474643 CASQ2O14958 399 aaPredicted RBP12.94□□□□□ -0.34
VARS-223ENST00000474643 CDC14BO60729 498 aa12.94□□□□□ -0.34
VARS-223ENST00000474643 CLPTM1O96005 669 aa12.94□□□□□ -0.34
VARS-223ENST00000474643 IFNGP01579 166 aa12.94□□□□□ -0.34
VARS-223ENST00000474643 TFP02787 698 aa12.94□□□□□ -0.34
VARS-223ENST00000474643 MMP7P09237 267 aaPredicted RBP12.94□□□□□ -0.34
VARS-223ENST00000474643 STOMP27105 288 aa12.94□□□□□ -0.34
VARS-223ENST00000474643 THBS2P35442 1172 aa12.94□□□□□ -0.34
VARS-223ENST00000474643 TMEM33P57088 247 aa12.94□□□□□ -0.34
VARS-223ENST00000474643 CCL8P80075 99 aa12.94□□□□□ -0.34
VARS-223ENST00000474643 SCRN3Q0VDG4 424 aa12.94□□□□□ -0.34
VARS-223ENST00000474643 MSMPQ1L6U9 139 aa12.94□□□□□ -0.34
VARS-223ENST00000474643 SLC36A3Q495N2 470 aa12.94□□□□□ -0.34
VARS-223ENST00000474643 FAHD1Q6P587 224 aa12.94□□□□□ -0.34
VARS-223ENST00000474643 FOXL2NBQ6ZUU3 175 aa12.94□□□□□ -0.34
VARS-223ENST00000474643 PAQR4Q8N4S7 273 aaPredicted RBP12.94□□□□□ -0.34
VARS-223ENST00000474643 OR51F2Q8NH61 342 aa12.94□□□□□ -0.34
VARS-223ENST00000474643 OTULINQ96BN8 352 aa12.94□□□□□ -0.34
VARS-223ENST00000474643 SOX7Q9BT81 388 aa12.94□□□□□ -0.34
VARS-223ENST00000474643 C9orf16Q9BUW7 83 aa12.94□□□□□ -0.34
VARS-223ENST00000474643 C19orf24Q9BVV8 132 aa12.94□□□□□ -0.34
VARS-223ENST00000474643 ZNF275Q9NSD4 429 aaPredicted RBP12.94□□□□□ -0.34
VARS-223ENST00000474643 KLHL21Q9UJP4 597 aa12.94□□□□□ -0.34
VARS-223ENST00000474643 B9D1Q9UPM9 204 aa12.94□□□□□ -0.34
VARS-223ENST00000474643 GRIP1Q9Y3R0 1128 aa12.94□□□□□ -0.34
VARS-223ENST00000474643 FBN3Q75N90 2809 aa12.94□□□□□ -0.34
VARS-223ENST00000474643 YLPM1P49750 1951 aaKnown RBP12.93□□□□□ -0.34
VARS-223ENST00000474643 RIIAD1A6NNX1 92 aa12.93□□□□□ -0.34
VARS-223ENST00000474643 C17orf100A8MU93 164 aa12.93□□□□□ -0.34
VARS-223ENST00000474643 TCF21O43680 179 aa12.93□□□□□ -0.34
VARS-223ENST00000474643 MPZL1O95297 269 aa12.93□□□□□ -0.34
VARS-223ENST00000474643 COL8A2P25067 703 aa12.93□□□□□ -0.34
VARS-223ENST00000474643 DVL1P1P54792 670 aaPredicted RBP12.93□□□□□ -0.34
VARS-223ENST00000474643 PSG4Q00888 419 aa12.93□□□□□ -0.34
VARS-223ENST00000474643 SLC34A1Q06495 639 aa12.93□□□□□ -0.34
VARS-223ENST00000474643 ENDOGQ14249 297 aaKnown RBP12.93□□□□□ -0.34
VARS-223ENST00000474643 TSTQ16762 297 aaKnown RBP12.93□□□□□ -0.34
VARS-223ENST00000474643 ZNF718Q3SXZ3 478 aa12.93□□□□□ -0.34
VARS-223ENST00000474643 OTPQ5XKR4 325 aa12.93□□□□□ -0.34
VARS-223ENST00000474643 ARL9Q6T311 187 aa12.93□□□□□ -0.34
VARS-223ENST00000474643 AMIGO2Q86SJ2 522 aa12.93□□□□□ -0.34
VARS-223ENST00000474643 SYT9Q86SS6 491 aa12.93□□□□□ -0.34
VARS-223ENST00000474643 OR6V1Q8N148 313 aa12.93□□□□□ -0.34
VARS-223ENST00000474643 PARP8Q8N3A8 854 aa12.93□□□□□ -0.34
VARS-223ENST00000474643 LNX2Q8N448 690 aa12.93□□□□□ -0.34
VARS-223ENST00000474643 PACRGLQ8N7B6 248 aa12.93□□□□□ -0.34
VARS-223ENST00000474643 CYB561A3Q8NBI2 242 aa12.93□□□□□ -0.34
VARS-223ENST00000474643 CPEB3Q8NE35 698 aaKnown RBP12.93□□□□□ -0.34
VARS-223ENST00000474643 PROKR2Q8NFJ6 384 aa12.93□□□□□ -0.34
VARS-223ENST00000474643 CLDND2Q8NHS1 167 aa12.93□□□□□ -0.34
VARS-223ENST00000474643 TIMD4Q96H15 378 aa12.93□□□□□ -0.34
VARS-223ENST00000474643 RBM4BQ9BQ04 359 aaKnown RBP12.93□□□□□ -0.34
VARS-223ENST00000474643 WACQ9BTA9 647 aa12.93□□□□□ -0.34
VARS-223ENST00000474643 RBM4Q9BWF3 364 aaKnown RBP12.93□□□□□ -0.34
VARS-223ENST00000474643 CDADC1Q9BWV3 514 aa12.93□□□□□ -0.34
VARS-223ENST00000474643 TEX12Q9BXU0 123 aa12.93□□□□□ -0.34
VARS-223ENST00000474643 OR2H1Q9GZK4 316 aa12.93□□□□□ -0.34
VARS-223ENST00000474643 OCEL1Q9H607 264 aa12.93□□□□□ -0.34
VARS-223ENST00000474643 SAP30LQ9HAJ7 183 aa12.93□□□□□ -0.34
VARS-223ENST00000474643 USE1Q9NZ43 259 aa12.93□□□□□ -0.34
VARS-223ENST00000474643 OAZ3Q9UMX2 235 aa12.93□□□□□ -0.34
VARS-223ENST00000474643 MALRD1Q5VYJ5 2156 aa12.93□□□□□ -0.34
VARS-223ENST00000474643 OR6C68A6NDL8 312 aa12.92□□□□□ -0.34
VARS-223ENST00000474643 CLDN25C9JDP6 229 aa12.92□□□□□ -0.34
VARS-223ENST00000474643 SGCEO43556 437 aa12.92□□□□□ -0.34
VARS-223ENST00000474643 DOK2O60496 412 aa12.92□□□□□ -0.34
VARS-223ENST00000474643 BAG2O95816 211 aa12.92□□□□□ -0.34
VARS-223ENST00000474643 GPANK1O95872 356 aa12.92□□□□□ -0.34
VARS-223ENST00000474643 SCG5P05408 212 aa12.92□□□□□ -0.34
VARS-223ENST00000474643 ZNF250P15622 560 aa12.92□□□□□ -0.34
VARS-223ENST00000474643 ZNF3P17036 446 aa12.92□□□□□ -0.34
VARS-223ENST00000474643 MAGEB1P43366 347 aa12.92□□□□□ -0.34
VARS-223ENST00000474643 ZNF81P51508 661 aa12.92□□□□□ -0.34
VARS-223ENST00000474643 ERVS71-1P61550 626 aa12.92□□□□□ -0.34
VARS-223ENST00000474643 MRPS11P82912 194 aaKnown RBP12.92□□□□□ -0.34
VARS-223ENST00000474643 AQP6Q13520 282 aa12.92□□□□□ -0.34
VARS-223ENST00000474643 HFEQ30201 348 aa12.92□□□□□ -0.34
VARS-223ENST00000474643 KRTAP24-1Q3LI83 254 aa12.92□□□□□ -0.34
VARS-223ENST00000474643 SPATA46Q5T0L3 261 aa12.92□□□□□ -0.34
VARS-223ENST00000474643 ZNF774Q6NX45 483 aa12.92□□□□□ -0.34
VARS-223ENST00000474643 RFLNBQ8N5W9 214 aa12.92□□□□□ -0.34
VARS-223ENST00000474643 IQCF1Q8N6M8 205 aa12.92□□□□□ -0.34
VARS-223ENST00000474643 SLC37A3Q8NCC5 494 aa12.92□□□□□ -0.34
VARS-223ENST00000474643 NPEPL1Q8NDH3 523 aa12.92□□□□□ -0.34
VARS-223ENST00000474643 OR2T4Q8NH00 348 aa12.92□□□□□ -0.34
VARS-223ENST00000474643 OR4Q3Q8NH05 313 aa12.92□□□□□ -0.34
VARS-223ENST00000474643 TMEM186Q96B77 213 aa12.92□□□□□ -0.34
VARS-223ENST00000474643 RAB39BQ96DA2 213 aa12.92□□□□□ -0.34
VARS-223ENST00000474643 PLEKHA8Q96JA3 519 aa12.92□□□□□ -0.34
VARS-223ENST00000474643 EGLN1Q9GZT9 426 aa12.92□□□□□ -0.34
VARS-223ENST00000474643 RACGAP1Q9H0H5 632 aa12.92□□□□□ -0.34
VARS-223ENST00000474643 WNT5BQ9H1J7 359 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms