RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 N4BP2Q86UW6 1770 aaPredicted RBP3.1□□□□□ -1.91
UBR3-208ENST00000474426 PREX2Q70Z35 1606 aa3.1□□□□□ -1.91
UBR3-208ENST00000474426 LOC102724200A0A096LPH7 203 aaPredicted RBP3.09□□□□□ -1.91
UBR3-208ENST00000474426 A0A1W2PR80 420 aa3.09□□□□□ -1.91
UBR3-208ENST00000474426 TRAPPC13A5PLN9 417 aa3.09□□□□□ -1.91
UBR3-208ENST00000474426 D6RAR5 112 aa3.09□□□□□ -1.91
UBR3-208ENST00000474426 KNG1P01042 644 aa3.09□□□□□ -1.91
UBR3-208ENST00000474426 ISG15P05161 165 aa3.09□□□□□ -1.91
UBR3-208ENST00000474426 MPZP25189 248 aa3.09□□□□□ -1.91
UBR3-208ENST00000474426 PBX2P40425 430 aa3.09□□□□□ -1.91
UBR3-208ENST00000474426 TFPI2P48307 235 aa3.09□□□□□ -1.91
UBR3-208ENST00000474426 RFX2P48378 723 aa3.09□□□□□ -1.91
UBR3-208ENST00000474426 FUT6P51993 359 aa3.09□□□□□ -1.91
UBR3-208ENST00000474426 RPL8P62917 257 aaKnown RBP3.09□□□□□ -1.91
UBR3-208ENST00000474426 CCNIQ14094 377 aa3.09□□□□□ -1.91
UBR3-208ENST00000474426 VGLL4Q14135 290 aa3.09□□□□□ -1.91
UBR3-208ENST00000474426 TSNQ15631 228 aaKnown RBP3.09□□□□□ -1.91
UBR3-208ENST00000474426 SYPL1Q16563 259 aa3.09□□□□□ -1.91
UBR3-208ENST00000474426 LRRC75BQ2VPJ9 315 aa3.09□□□□□ -1.91
UBR3-208ENST00000474426 POM121L1PQ3SYA9 428 aa3.09□□□□□ -1.91
UBR3-208ENST00000474426 TMEM78Q5T7P6 136 aa3.09□□□□□ -1.91
UBR3-208ENST00000474426 NRARPQ7Z6K4 114 aa3.09□□□□□ -1.91
UBR3-208ENST00000474426 ADGRF3Q8IZF5 1079 aa3.09□□□□□ -1.91
UBR3-208ENST00000474426 OR8I2Q8N0Y5 310 aa3.09□□□□□ -1.91
UBR3-208ENST00000474426 SLC16A11Q8NCK7 471 aa3.09□□□□□ -1.91
UBR3-208ENST00000474426 OR10AD1Q8NGE0 317 aa3.09□□□□□ -1.91
UBR3-208ENST00000474426 OR52B6Q8NGF0 335 aa3.09□□□□□ -1.91
UBR3-208ENST00000474426 OR56B4Q8NH76 319 aa3.09□□□□□ -1.91
UBR3-208ENST00000474426 RPLP0P6Q8NHW5 317 aa3.09□□□□□ -1.91
UBR3-208ENST00000474426 CD99L2Q8TCZ2 262 aa3.09□□□□□ -1.91
UBR3-208ENST00000474426 CLEC4CQ8WTT0 213 aa3.09□□□□□ -1.91
UBR3-208ENST00000474426 SMAP2Q8WU79 429 aaPredicted RBP3.09□□□□□ -1.91
UBR3-208ENST00000474426 UCN3Q969E3 161 aa3.09□□□□□ -1.91
UBR3-208ENST00000474426 C10orf35Q96D05 121 aa3.09□□□□□ -1.91
UBR3-208ENST00000474426 ADI1Q9BV57 179 aa3.09□□□□□ -1.91
UBR3-208ENST00000474426 OR2J1Q9GZK6 312 aa3.09□□□□□ -1.91
UBR3-208ENST00000474426 SSU72Q9NP77 194 aaKnown RBP3.09□□□□□ -1.91
UBR3-208ENST00000474426 SCN3BQ9NY72 215 aa3.09□□□□□ -1.91
UBR3-208ENST00000474426 NLKQ9UBE8 527 aa3.09□□□□□ -1.91
UBR3-208ENST00000474426 RAXQ9Y2V3 346 aa3.09□□□□□ -1.91
UBR3-208ENST00000474426 TIMM10BQ9Y5J6 103 aa3.09□□□□□ -1.91
UBR3-208ENST00000474426 CDK12Q9NYV4 1490 aaPredicted RBP3.09□□□□□ -1.91
UBR3-208ENST00000474426 ERVK-7P63135 1459 aa3.09□□□□□ -1.91
UBR3-208ENST00000474426 TRBV4-1A0A0J9YWV2 114 aa3.09□□□□□ -1.91
UBR3-208ENST00000474426 FRG2CA6NGY1 282 aa3.09□□□□□ -1.91
UBR3-208ENST00000474426 C17orf100A8MU93 164 aa3.09□□□□□ -1.91
UBR3-208ENST00000474426 CASKO14936 926 aa3.09□□□□□ -1.91
UBR3-208ENST00000474426 OR7C2O60412 319 aa3.09□□□□□ -1.91
UBR3-208ENST00000474426 IGHG3P01860 377 aa3.09□□□□□ -1.91
UBR3-208ENST00000474426 AMY1AP04745 511 aa3.09□□□□□ -1.91
UBR3-208ENST00000474426 UBBP0CG47 229 aa3.09□□□□□ -1.91
UBR3-208ENST00000474426 ZNF43P17038 809 aa3.09□□□□□ -1.91
UBR3-208ENST00000474426 NUMBP49757 651 aa3.09□□□□□ -1.91
UBR3-208ENST00000474426 TCL1AP56279 114 aa3.09□□□□□ -1.91
UBR3-208ENST00000474426 LILRA4P59901 499 aa3.09□□□□□ -1.91
UBR3-208ENST00000474426 SMAGPQ0VAQ4 97 aa3.09□□□□□ -1.91
UBR3-208ENST00000474426 JOSD1Q15040 202 aaPredicted RBP3.09□□□□□ -1.91
UBR3-208ENST00000474426 TBR1Q16650 682 aa3.09□□□□□ -1.91
UBR3-208ENST00000474426 LRRC26Q2I0M4 334 aa3.09□□□□□ -1.91
UBR3-208ENST00000474426 ODF4Q2M2E3 257 aa3.09□□□□□ -1.91
UBR3-208ENST00000474426 TTLL9Q3SXZ7 439 aa3.09□□□□□ -1.91
UBR3-208ENST00000474426 TMEM225Q6GV28 225 aa3.09□□□□□ -1.91
UBR3-208ENST00000474426 FAM71F2Q6NXP2 309 aa3.09□□□□□ -1.91
UBR3-208ENST00000474426 GLB1LQ6UWU2 654 aa3.09□□□□□ -1.91
UBR3-208ENST00000474426 Q6ZSR9 355 aa3.09□□□□□ -1.91
UBR3-208ENST00000474426 STRADAQ7RTN6 431 aa3.09□□□□□ -1.91
UBR3-208ENST00000474426 UBE3DQ7Z6J8 389 aa3.09□□□□□ -1.91
UBR3-208ENST00000474426 TMPRSS12Q86WS5 348 aa3.09□□□□□ -1.91
UBR3-208ENST00000474426 PDZD9Q8IXQ8 264 aa3.09□□□□□ -1.91
UBR3-208ENST00000474426 C15orf54Q8N8G6 183 aa3.09□□□□□ -1.91
UBR3-208ENST00000474426 OR52I1Q8NGK6 324 aa3.09□□□□□ -1.91
UBR3-208ENST00000474426 IL17DQ8TAD2 202 aa3.09□□□□□ -1.91
UBR3-208ENST00000474426 UBASH3BQ8TF42 649 aa3.09□□□□□ -1.91
UBR3-208ENST00000474426 MALSU1Q96EH3 234 aa3.09□□□□□ -1.91
UBR3-208ENST00000474426 CCDC140Q96MF4 163 aa3.09□□□□□ -1.91
UBR3-208ENST00000474426 MS4A4EQ96PG1 132 aa3.09□□□□□ -1.91
UBR3-208ENST00000474426 OR2M2Q96R28 347 aa3.09□□□□□ -1.91
UBR3-208ENST00000474426 SIGMAR1Q99720 223 aa3.09□□□□□ -1.91
UBR3-208ENST00000474426 ACTR3CQ9C0K3 210 aaPredicted RBP3.09□□□□□ -1.91
UBR3-208ENST00000474426 CLMPQ9H6B4 373 aa3.09□□□□□ -1.91
UBR3-208ENST00000474426 BEX1Q9HBH7 125 aa3.09□□□□□ -1.91
UBR3-208ENST00000474426 DCAF13Q9NV06 445 aaKnown RBP3.09□□□□□ -1.91
UBR3-208ENST00000474426 DMAC2Q9NW81 257 aa3.09□□□□□ -1.91
UBR3-208ENST00000474426 PAK1IP1Q9NWT1 392 aaPredicted RBP3.09□□□□□ -1.91
UBR3-208ENST00000474426 PRODH2Q9UF12 536 aa3.09□□□□□ -1.91
UBR3-208ENST00000474426 ATP10DQ9P241 1426 aa3.09□□□□□ -1.91
UBR3-208ENST00000474426 ZNF638Q14966 1978 aaKnown RBP3.09□□□□□ -1.91
UBR3-208ENST00000474426 TANC1Q9C0D5 1861 aa3.09□□□□□ -1.91
UBR3-208ENST00000474426 MSGN1A6NI15 193 aa3.09□□□□□ -1.92
UBR3-208ENST00000474426 MSTNO14793 375 aa3.09□□□□□ -1.92
UBR3-208ENST00000474426 DSCR3O14972 297 aa3.09□□□□□ -1.92
UBR3-208ENST00000474426 TPST1O60507 370 aa3.09□□□□□ -1.92
UBR3-208ENST00000474426 FOXH1O75593 365 aa3.09□□□□□ -1.92
UBR3-208ENST00000474426 TIMP1P01033 207 aa3.09□□□□□ -1.92
UBR3-208ENST00000474426 CTSBP07858 339 aa3.09□□□□□ -1.92
UBR3-208ENST00000474426 UMODP07911 640 aa3.09□□□□□ -1.92
UBR3-208ENST00000474426 ENGP17813 658 aa3.09□□□□□ -1.92
UBR3-208ENST00000474426 HMGB2P26583 209 aaKnown RBP3.09□□□□□ -1.92
UBR3-208ENST00000474426 CHATP28329 748 aa3.09□□□□□ -1.92
UBR3-208ENST00000474426 OR3A4PP47883 348 aa3.09□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms