RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 CENPNQ96H22 339 aaPredicted RBP5.4□□□□□ -1.54
SMARCE1-208ENST00000474246 OR10C1Q96KK4 312 aa5.4□□□□□ -1.54
SMARCE1-208ENST00000474246 UGT2B28Q9BY64 529 aa5.4□□□□□ -1.54
SMARCE1-208ENST00000474246 CADM1Q9BY67 442 aaKnown RBP5.4□□□□□ -1.54
SMARCE1-208ENST00000474246 LHPPQ9H008 270 aa5.4□□□□□ -1.54
SMARCE1-208ENST00000474246 METTL1Q9UBP6 276 aaKnown RBP5.4□□□□□ -1.54
SMARCE1-208ENST00000474246 FBXL4Q9UKA2 621 aa5.4□□□□□ -1.54
SMARCE1-208ENST00000474246 CEPT1Q9Y6K0 416 aa5.4□□□□□ -1.54
SMARCE1-208ENST00000474246 RALGAPA1Q6GYQ0 2036 aa5.4□□□□□ -1.55
SMARCE1-208ENST00000474246 ASTN1O14525 1302 aa5.4□□□□□ -1.55
SMARCE1-208ENST00000474246 CACNA1DQ01668 2161 aa5.4□□□□□ -1.55
SMARCE1-208ENST00000474246 SVILO95425 2214 aa5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 C1orf226A1L170 272 aa5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 F8W735 103 aaPredicted RBP5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 M0QZQ0 153 aa5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 TMPRSS2O15393 492 aa5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 LYPLA1O75608 230 aaPredicted RBP5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 IFNA1P01562 189 aa5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 IGHG4P01861 327 aa5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 SERPINA7P05543 415 aa5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 TRAPPC2P0DI81 140 aa5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 TRAPPC2BP0DI82 140 aa5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 GABRA5P31644 462 aa5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 GGT2P36268 569 aa5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 TAS2R50P59544 299 aa5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 TBPL1P62380 186 aa5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 GNG3P63215 75 aa5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 MRPS10P82664 201 aaKnown RBP5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 PAX2Q02962 417 aa5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 ECH1Q13011 328 aa5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 TMEM268Q5VZI3 342 aa5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 TAPT1Q6NXT6 567 aa5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 DHRS13Q6UX07 377 aa5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 Q8N1Y9 231 aa5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 ATPAF2Q8N5M1 289 aa5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 BOLLQ8N9W6 283 aaKnown RBP5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 NPEPL1Q8NDH3 523 aa5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 NLGN4YQ8NFZ3 816 aaPredicted RBP5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 OR2Z1Q8NG97 314 aa5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 OR14L1PQ8NHC6 308 aa5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 NPRL2Q8WTW4 380 aa5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 FAM151AQ8WW52 585 aa5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 BAALCQ8WXS3 180 aa5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 SMIM19Q96E16 107 aa5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 SCRN2Q96FV2 425 aa5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 FMO2Q99518 471 aa5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 ALOXE3Q9BYJ1 711 aa5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 CHRNA10Q9GZZ6 450 aa5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 DCSTAMPQ9H295 470 aa5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 NIPAL2Q9H841 368 aa5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 TMEM9BQ9NQ34 198 aa5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 KLRF1Q9NZS2 232 aa5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 JPT1Q9UK76 154 aa5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 C14orf166Q9Y224 244 aaKnown RBP5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 PEX16Q9Y5Y5 336 aa5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 ACACAQ13085 2346 aa5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 NBEAL1Q6ZS30 2694 aa5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 FREM2Q5SZK8 3169 aa5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 AKAP13Q12802 2813 aa5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 ATRQ13535 2644 aa5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 ANTXRLA6NF34 631 aa5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 ZNF780AO75290 641 aaPredicted RBP5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 NDUFA7O95182 113 aa5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 LIPCP11150 499 aa5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 ADH5P11766 374 aa5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 UGT2B7P16662 529 aa5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 KITLGP21583 273 aa5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 ITPKBP27987 946 aa5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 EPHA3P29320 983 aa5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 PRDX3P30048 256 aaKnown RBP5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 ARRB2P32121 409 aa5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 QARSP47897 775 aaKnown RBP5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 TDGF1P3P51864 188 aa5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 CD47Q08722 323 aa5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 ELAVL2Q12926 359 aaKnown RBP5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 DOC2BQ14184 412 aa5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 NFATC4Q14934 902 aa5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 MAD2L1BPQ15013 274 aaPredicted RBP5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 FNBP1LQ5T0N5 605 aa5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 GPRC6AQ5T6X5 926 aa5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 FAM78BQ5VT40 261 aa5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 ANKRD22Q5VYY1 191 aa5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 C16orf89Q6UX73 402 aa5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 NIT1Q86X76 327 aa5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 CATSPER3Q86XQ3 398 aa5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 PLXDC1Q8IUK5 500 aa5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 OR6M1Q8NGM8 313 aa5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 OR6N1Q8NGY5 312 aa5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 FEZF2Q8TBJ5 459 aa5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 MOB3AQ96BX8 217 aa5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 RAB39BQ96DA2 213 aa5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 KCTD7Q96MP8 289 aa5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 QTRT1Q9BXR0 403 aaKnown RBP5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 CHST5Q9GZS9 411 aa5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 GPATCH2LQ9NWQ4 482 aa5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 YLPM1P49750 1951 aaKnown RBP5.39□□□□□ -1.55
SMARCE1-208ENST00000474246 MYO10Q9HD67 2058 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms