RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 ZNF627Q7L945 461 aa9□□□□□ -0.97
PRPF38A-202ENST00000474048 SSX8Q7RTT4 187 aa9□□□□□ -0.97
PRPF38A-202ENST00000474048 FJX1Q86VR8 437 aa9□□□□□ -0.97
PRPF38A-202ENST00000474048 SKA3Q8IX90 412 aa9□□□□□ -0.97
PRPF38A-202ENST00000474048 ZNF433Q8N7K0 673 aaPredicted RBP9□□□□□ -0.97
PRPF38A-202ENST00000474048 NAXEQ8NCW5 288 aa9□□□□□ -0.97
PRPF38A-202ENST00000474048 KBTBD8Q8NFY9 601 aa9□□□□□ -0.97
PRPF38A-202ENST00000474048 OR1J2Q8NGS2 313 aa9□□□□□ -0.97
PRPF38A-202ENST00000474048 OR1F12Q8NHA8 337 aa9□□□□□ -0.97
PRPF38A-202ENST00000474048 TMIGD2Q96BF3 282 aa9□□□□□ -0.97
PRPF38A-202ENST00000474048 DGCR14Q96DF8 476 aaKnown RBP9□□□□□ -0.97
PRPF38A-202ENST00000474048 FBXO17Q96EF6 278 aa9□□□□□ -0.97
PRPF38A-202ENST00000474048 ZNF799Q96GE5 643 aa9□□□□□ -0.97
PRPF38A-202ENST00000474048 MAP6Q96JE9 813 aa9□□□□□ -0.97
PRPF38A-202ENST00000474048 BCL7BQ9BQE9 202 aa9□□□□□ -0.97
PRPF38A-202ENST00000474048 CHCHD6Q9BRQ6 235 aa9□□□□□ -0.97
PRPF38A-202ENST00000474048 CDH20Q9HBT6 801 aa9□□□□□ -0.97
PRPF38A-202ENST00000474048 Q9UFV3 132 aa9□□□□□ -0.97
PRPF38A-202ENST00000474048 ATPIF1Q9UII2 106 aa9□□□□□ -0.97
PRPF38A-202ENST00000474048 STUB1Q9UNE7 303 aa9□□□□□ -0.97
PRPF38A-202ENST00000474048 MGAQ8IWI9 3026 aa9□□□□□ -0.97
PRPF38A-202ENST00000474048 PIEZO2Q9H5I5 2752 aa9□□□□□ -0.97
PRPF38A-202ENST00000474048 ACACBO00763 2458 aa8.99□□□□□ -0.97
PRPF38A-202ENST00000474048 LOC400499M0QZD8 3231 aa8.99□□□□□ -0.97
PRPF38A-202ENST00000474048 CFAP47Q6ZTR5 3102 aa8.99□□□□□ -0.97
PRPF38A-202ENST00000474048 A0A1B0GVI7 797 aa8.99□□□□□ -0.97
PRPF38A-202ENST00000474048 HLA-HP01893 362 aa8.99□□□□□ -0.97
PRPF38A-202ENST00000474048 CD2P06729 351 aa8.99□□□□□ -0.97
PRPF38A-202ENST00000474048 ADRA2AP08913 450 aa8.99□□□□□ -0.97
PRPF38A-202ENST00000474048 COX5BP10606 129 aa8.99□□□□□ -0.97
PRPF38A-202ENST00000474048 ZNF12P17014 697 aa8.99□□□□□ -0.97
PRPF38A-202ENST00000474048 MYL9P24844 172 aa8.99□□□□□ -0.97
PRPF38A-202ENST00000474048 LIPAP38571 399 aa8.99□□□□□ -0.97
PRPF38A-202ENST00000474048 ASCL1P50553 236 aa8.99□□□□□ -0.97
PRPF38A-202ENST00000474048 GTF2A1P52655 376 aaPredicted RBP8.99□□□□□ -0.97
PRPF38A-202ENST00000474048 TLE1Q04724 770 aa8.99□□□□□ -0.97
PRPF38A-202ENST00000474048 TPBGQ13641 420 aa8.99□□□□□ -0.97
PRPF38A-202ENST00000474048 GFOD2Q3B7J2 385 aa8.99□□□□□ -0.97
PRPF38A-202ENST00000474048 SFRP5Q5T4F7 317 aa8.99□□□□□ -0.97
PRPF38A-202ENST00000474048 C1QTNF12Q5T7M4 302 aa8.99□□□□□ -0.97
PRPF38A-202ENST00000474048 ALKBH2Q6NS38 261 aa8.99□□□□□ -0.97
PRPF38A-202ENST00000474048 DRAM2Q6UX65 266 aa8.99□□□□□ -0.97
PRPF38A-202ENST00000474048 GDPGP1Q6ZNW5 385 aa8.99□□□□□ -0.97
PRPF38A-202ENST00000474048 ANKRD13BQ86YJ7 626 aa8.99□□□□□ -0.97
PRPF38A-202ENST00000474048 PHC2Q8IXK0 858 aa8.99□□□□□ -0.97
PRPF38A-202ENST00000474048 GABRG1Q8N1C3 465 aa8.99□□□□□ -0.97
PRPF38A-202ENST00000474048 AKR7LQ8NHP1 331 aa8.99□□□□□ -0.97
PRPF38A-202ENST00000474048 CA5BP1Q8WTZ4 195 aa8.99□□□□□ -0.97
PRPF38A-202ENST00000474048 BCL2L2Q92843 193 aaPredicted RBP8.99□□□□□ -0.97
PRPF38A-202ENST00000474048 TMEM203Q969S6 136 aa8.99□□□□□ -0.97
PRPF38A-202ENST00000474048 AMELYQ99218 206 aa8.99□□□□□ -0.97
PRPF38A-202ENST00000474048 DOK1Q99704 481 aa8.99□□□□□ -0.97
PRPF38A-202ENST00000474048 SLITRK2Q9H156 845 aa8.99□□□□□ -0.97
PRPF38A-202ENST00000474048 OR10A2Q9H208 303 aa8.99□□□□□ -0.97
PRPF38A-202ENST00000474048 PLEKHA1Q9HB21 404 aa8.99□□□□□ -0.97
PRPF38A-202ENST00000474048 DDX28Q9NUL7 540 aaKnown RBP8.99□□□□□ -0.97
PRPF38A-202ENST00000474048 EIF3KQ9UBQ5 218 aaKnown RBP8.99□□□□□ -0.97
PRPF38A-202ENST00000474048 ENPP5Q9UJA9 477 aa8.99□□□□□ -0.97
PRPF38A-202ENST00000474048 OR52A1Q9UKL2 312 aa8.99□□□□□ -0.97
PRPF38A-202ENST00000474048 ZNF281Q9Y2X9 895 aa8.99□□□□□ -0.97
PRPF38A-202ENST00000474048 GRIP1Q9Y3R0 1128 aa8.99□□□□□ -0.97
PRPF38A-202ENST00000474048 ALPK2Q86TB3 2170 aa8.99□□□□□ -0.97
PRPF38A-202ENST00000474048 ARPC4-TTLL3A0A0A6YYG9 625 aa8.98□□□□□ -0.97
PRPF38A-202ENST00000474048 C5orf49A4QMS7 147 aa8.98□□□□□ -0.97
PRPF38A-202ENST00000474048 ACOD1A6NK06 481 aa8.98□□□□□ -0.97
PRPF38A-202ENST00000474048 ZNF879B4DU55 563 aa8.98□□□□□ -0.97
PRPF38A-202ENST00000474048 ZNF701M0R085 212 aaPredicted RBP8.98□□□□□ -0.97
PRPF38A-202ENST00000474048 SLC22A1O15245 554 aa8.98□□□□□ -0.97
PRPF38A-202ENST00000474048 PLPP2O43688 288 aa8.98□□□□□ -0.97
PRPF38A-202ENST00000474048 ARL6IP5O75915 188 aa8.98□□□□□ -0.97
PRPF38A-202ENST00000474048 ABHD16AO95870 558 aa8.98□□□□□ -0.97
PRPF38A-202ENST00000474048 CGAP01215 116 aa8.98□□□□□ -0.97
PRPF38A-202ENST00000474048 PATE4P0C8F1 98 aa8.98□□□□□ -0.97
PRPF38A-202ENST00000474048 OCM2P0CE71 109 aa8.98□□□□□ -0.97
PRPF38A-202ENST00000474048 OCMP0CE72 109 aaPredicted RBP8.98□□□□□ -0.97
PRPF38A-202ENST00000474048 PSKH1P11801 424 aa8.98□□□□□ -0.97
PRPF38A-202ENST00000474048 PSMB1P20618 241 aaKnown RBP8.98□□□□□ -0.97
PRPF38A-202ENST00000474048 GADD45AP24522 165 aa8.98□□□□□ -0.97
PRPF38A-202ENST00000474048 STOMP27105 288 aa8.98□□□□□ -0.97
PRPF38A-202ENST00000474048 MMP16P51512 607 aa8.98□□□□□ -0.97
PRPF38A-202ENST00000474048 CCR9P51686 369 aa8.98□□□□□ -0.97
PRPF38A-202ENST00000474048 ZNF121P58317 390 aaPredicted RBP8.98□□□□□ -0.97
PRPF38A-202ENST00000474048 LSM3P62310 102 aaKnown RBP8.98□□□□□ -0.97
PRPF38A-202ENST00000474048 TUBA1BP68363 451 aa8.98□□□□□ -0.97
PRPF38A-202ENST00000474048 PSG4Q00888 419 aa8.98□□□□□ -0.97
PRPF38A-202ENST00000474048 MALLQ13021 153 aa8.98□□□□□ -0.97
PRPF38A-202ENST00000474048 GABRA6Q16445 453 aa8.98□□□□□ -0.97
PRPF38A-202ENST00000474048 ODF4Q2M2E3 257 aa8.98□□□□□ -0.97
PRPF38A-202ENST00000474048 CCDC92Q53HC0 331 aaPredicted RBP8.98□□□□□ -0.97
PRPF38A-202ENST00000474048 YIF1BQ5BJH7 314 aa8.98□□□□□ -0.97
PRPF38A-202ENST00000474048 TMEM244Q5VVB8 128 aa8.98□□□□□ -0.97
PRPF38A-202ENST00000474048 DMKNQ6E0U4 476 aaPredicted RBP8.98□□□□□ -0.97
PRPF38A-202ENST00000474048 FAM57BQ71RH2 274 aa8.98□□□□□ -0.97
PRPF38A-202ENST00000474048 TUBA1AQ71U36 451 aa8.98□□□□□ -0.97
PRPF38A-202ENST00000474048 MDP1Q86V88 176 aa8.98□□□□□ -0.97
PRPF38A-202ENST00000474048 OR52H1Q8NGJ2 320 aa8.98□□□□□ -0.97
PRPF38A-202ENST00000474048 OR2G2Q8NGZ5 317 aa8.98□□□□□ -0.97
PRPF38A-202ENST00000474048 GPR148Q8TDV2 347 aa8.98□□□□□ -0.97
PRPF38A-202ENST00000474048 GHSRQ92847 366 aa8.98□□□□□ -0.97
PRPF38A-202ENST00000474048 ISOC1Q96CN7 298 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms