RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 SYT11Q9BT88 431 aa1.85□□□□□ -2.11
CALD1-216ENST00000473714 NAT10Q9H0A0 1025 aaKnown RBP1.85□□□□□ -2.11
CALD1-216ENST00000473714 ZSCAN16Q9H4T2 348 aaPredicted RBP1.85□□□□□ -2.11
CALD1-216ENST00000473714 ZNF385DQ9H6B1 395 aa1.85□□□□□ -2.11
CALD1-216ENST00000473714 NEK6Q9HC98 313 aa1.85□□□□□ -2.11
CALD1-216ENST00000473714 DDX18Q9NVP1 670 aaKnown RBP1.85□□□□□ -2.11
CALD1-216ENST00000473714 NECAP2Q9NVZ3 263 aa1.85□□□□□ -2.11
CALD1-216ENST00000473714 SMOXQ9NWM0 555 aa1.85□□□□□ -2.11
CALD1-216ENST00000473714 PAK1IP1Q9NWT1 392 aaPredicted RBP1.85□□□□□ -2.11
CALD1-216ENST00000473714 IMPAD1Q9NX62 359 aa1.85□□□□□ -2.11
CALD1-216ENST00000473714 SENP1Q9P0U3 644 aa1.85□□□□□ -2.11
CALD1-216ENST00000473714 PSMC3IPQ9P2W1 217 aaPredicted RBP1.85□□□□□ -2.11
CALD1-216ENST00000473714 ONECUT1Q9UBC0 465 aa1.85□□□□□ -2.11
CALD1-216ENST00000473714 MTRF1LQ9UGC7 380 aaKnown RBP1.85□□□□□ -2.11
CALD1-216ENST00000473714 RPUSD1Q9UJJ7 312 aaKnown RBP1.85□□□□□ -2.11
CALD1-216ENST00000473714 ZNF221Q9UK13 617 aa1.85□□□□□ -2.11
CALD1-216ENST00000473714 KIAA1257Q9ULG3 409 aa1.85□□□□□ -2.11
CALD1-216ENST00000473714 ABCG2Q9UNQ0 655 aa1.85□□□□□ -2.11
CALD1-216ENST00000473714 U3KQK5 164 aa1.85□□□□□ -2.11
CALD1-216ENST00000473714 RNF213Q63HN8 5207 aa1.85□□□□□ -2.11
CALD1-216ENST00000473714 PLECQ15149 4684 aaKnown RBP1.85□□□□□ -2.11
CALD1-216ENST00000473714 SCN3AQ9NY46 2000 aa1.84□□□□□ -2.11
CALD1-216ENST00000473714 PPIAL4EA0A075B759 164 aa1.84□□□□□ -2.11
CALD1-216ENST00000473714 IGHV3OR16-12A0A075B7B8 117 aa1.84□□□□□ -2.11
CALD1-216ENST00000473714 IGHV2-70DA0A0C4DH43 119 aa1.84□□□□□ -2.11
CALD1-216ENST00000473714 NCF1BA6NI72 391 aaPredicted RBP1.84□□□□□ -2.11
CALD1-216ENST00000473714 ERI2A8K979 691 aaKnown RBP1.84□□□□□ -2.11
CALD1-216ENST00000473714 GABRR3A8MPY1 467 aa1.84□□□□□ -2.11
CALD1-216ENST00000473714 NCF1CA8MVU1 366 aaPredicted RBP1.84□□□□□ -2.11
CALD1-216ENST00000473714 DEFB108AA8MXU0 73 aa1.84□□□□□ -2.11
CALD1-216ENST00000473714 C9JVG2 144 aa1.84□□□□□ -2.11
CALD1-216ENST00000473714 K7EQG2 157 aa1.84□□□□□ -2.11
CALD1-216ENST00000473714 SULT2B1O00204 365 aa1.84□□□□□ -2.11
CALD1-216ENST00000473714 PSTPIP1O43586 416 aa1.84□□□□□ -2.11
CALD1-216ENST00000473714 CDC40O60508 579 aaKnown RBP eCLIP1.84□□□□□ -2.11
CALD1-216ENST00000473714 UGT1A9O60656 530 aa1.84□□□□□ -2.11
CALD1-216ENST00000473714 SRPX2O60687 465 aaPredicted RBP1.84□□□□□ -2.11
CALD1-216ENST00000473714 HCN1O60741 890 aa1.84□□□□□ -2.11
CALD1-216ENST00000473714 CDH16O75309 829 aa1.84□□□□□ -2.11
CALD1-216ENST00000473714 LCA5LO95447 670 aa1.84□□□□□ -2.11
CALD1-216ENST00000473714 IGHG1P01857 330 aa1.84□□□□□ -2.11
CALD1-216ENST00000473714 KRT14P02533 472 aa1.84□□□□□ -2.11
CALD1-216ENST00000473714 SERPIND1P05546 499 aa1.84□□□□□ -2.11
CALD1-216ENST00000473714 PPIAL4FP0DN26 164 aa1.84□□□□□ -2.11
CALD1-216ENST00000473714 SLC25A16P16260 332 aa1.84□□□□□ -2.11
CALD1-216ENST00000473714 MMP11P24347 488 aa1.84□□□□□ -2.11
CALD1-216ENST00000473714 ADORA2BP29275 332 aa1.84□□□□□ -2.11
CALD1-216ENST00000473714 FDFT1P37268 417 aa1.84□□□□□ -2.11
CALD1-216ENST00000473714 P2RY1P47900 373 aa1.84□□□□□ -2.11
CALD1-216ENST00000473714 RPL29P47914 159 aaKnown RBP1.84□□□□□ -2.11
CALD1-216ENST00000473714 CASP4P49662 377 aa1.84□□□□□ -2.11
CALD1-216ENST00000473714 DAP3P51398 398 aaKnown RBP1.84□□□□□ -2.11
CALD1-216ENST00000473714 GPM6AP51674 278 aa1.84□□□□□ -2.11
CALD1-216ENST00000473714 EFNB2P52799 333 aa1.84□□□□□ -2.11
CALD1-216ENST00000473714 ERVK11-1P61568 191 aa1.84□□□□□ -2.11
CALD1-216ENST00000473714 RND3P61587 244 aa1.84□□□□□ -2.11
CALD1-216ENST00000473714 IRX1P78414 480 aaPredicted RBP1.84□□□□□ -2.11
CALD1-216ENST00000473714 MRPS11P82912 194 aaKnown RBP1.84□□□□□ -2.11
CALD1-216ENST00000473714 GBE1Q04446 702 aa1.84□□□□□ -2.11
CALD1-216ENST00000473714 ENPEPQ07075 957 aa1.84□□□□□ -2.11
CALD1-216ENST00000473714 MERTKQ12866 999 aa1.84□□□□□ -2.11
CALD1-216ENST00000473714 ZNF154Q13106 437 aa1.84□□□□□ -2.11
CALD1-216ENST00000473714 LAGE3Q14657 143 aa1.84□□□□□ -2.11
CALD1-216ENST00000473714 SLC25A52Q3SY17 297 aa1.84□□□□□ -2.11
CALD1-216ENST00000473714 SLC22A6Q4U2R8 563 aa1.84□□□□□ -2.11
CALD1-216ENST00000473714 SFT2D3Q587I9 215 aa1.84□□□□□ -2.11
CALD1-216ENST00000473714 C6orf226Q5I0X4 101 aa1.84□□□□□ -2.11
CALD1-216ENST00000473714 SAMD4BQ5PRF9 694 aaKnown RBP1.84□□□□□ -2.11
CALD1-216ENST00000473714 LCE1FQ5T754 118 aa1.84□□□□□ -2.11
CALD1-216ENST00000473714 C9orf66Q5T8R8 295 aa1.84□□□□□ -2.11
CALD1-216ENST00000473714 REG3GQ6UW15 175 aa1.84□□□□□ -2.11
CALD1-216ENST00000473714 UQCC3Q6UW78 93 aa1.84□□□□□ -2.11
CALD1-216ENST00000473714 ARCQ7LC44 396 aa1.84□□□□□ -2.11
CALD1-216ENST00000473714 H2BFWTQ7Z2G1 175 aa1.84□□□□□ -2.11
CALD1-216ENST00000473714 SLC25A42Q86VD7 318 aa1.84□□□□□ -2.11
CALD1-216ENST00000473714 ERI1Q8IV48 349 aaKnown RBP1.84□□□□□ -2.11
CALD1-216ENST00000473714 C15orf54Q8N8G6 183 aa1.84□□□□□ -2.11
CALD1-216ENST00000473714 ZNF491Q8N8L2 437 aa1.84□□□□□ -2.11
CALD1-216ENST00000473714 FNDC8Q8TC99 324 aa1.84□□□□□ -2.11
CALD1-216ENST00000473714 CXorf40AQ8TE69 158 aa1.84□□□□□ -2.11
CALD1-216ENST00000473714 CCDC12Q8WUD4 166 aaPredicted RBP1.84□□□□□ -2.11
CALD1-216ENST00000473714 TAF15Q92804 592 aaKnown RBP eCLIP1.84□□□□□ -2.11
CALD1-216ENST00000473714 UBE2E3Q969T4 207 aa1.84□□□□□ -2.11
CALD1-216ENST00000473714 SEC22AQ96IW7 307 aa1.84□□□□□ -2.11
CALD1-216ENST00000473714 ZNF641Q96N77 438 aaPredicted RBP1.84□□□□□ -2.11
CALD1-216ENST00000473714 GSDMAQ96QA5 445 aa1.84□□□□□ -2.11
CALD1-216ENST00000473714 MCCC1Q96RQ3 725 aaPredicted RBP1.84□□□□□ -2.11
CALD1-216ENST00000473714 NPY6RQ99463 290 aa1.84□□□□□ -2.11
CALD1-216ENST00000473714 FMO2Q99518 471 aa1.84□□□□□ -2.11
CALD1-216ENST00000473714 MAPKAP1Q9BPZ7 522 aa1.84□□□□□ -2.11
CALD1-216ENST00000473714 C11orf70Q9BRQ4 267 aa1.84□□□□□ -2.11
CALD1-216ENST00000473714 SLC35A5Q9BS91 424 aa1.84□□□□□ -2.11
CALD1-216ENST00000473714 HCAR1Q9BXC0 346 aa1.84□□□□□ -2.11
CALD1-216ENST00000473714 PARD6BQ9BYG5 372 aa1.84□□□□□ -2.11
CALD1-216ENST00000473714 NMUR2Q9GZQ4 415 aa1.84□□□□□ -2.11
CALD1-216ENST00000473714 PPA2Q9H2U2 334 aa1.84□□□□□ -2.11
CALD1-216ENST00000473714 PPDPFQ9H3Y8 114 aa1.84□□□□□ -2.11
CALD1-216ENST00000473714 RBKSQ9H477 322 aa1.84□□□□□ -2.11
CALD1-216ENST00000473714 REEP4Q9H6H4 257 aa1.84□□□□□ -2.11
CALD1-216ENST00000473714 EXO5Q9H790 373 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms