RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 POM121BA6NF01 834 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 OR6C76A6NM76 312 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 FIGNL2A6NMB9 653 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 C17orf105B2RV13 164 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 I3L1I5 382 aaPredicted RBP5.5□□□□□ -1.53
HERC4-209ENST00000473533 HCRTR1O43613 425 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 DXOO77932 396 aaKnown RBP5.5□□□□□ -1.53
HERC4-209ENST00000473533 EML2O95834 649 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 S100A6P06703 90 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 FBXO45P0C2W1 286 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 LYL1P12980 280 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 CTSEP14091 401 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 ZNF28P17035 718 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 FCARP24071 287 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 FPR2P25090 351 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 MEOX2P50222 304 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 ACKR1Q16570 336 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 RNF212Q495C1 297 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 C2orf27AQ580R0 203 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 TANGO2Q6ICL3 276 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 ATRAIDQ6UW56 229 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 KCTD9Q7L273 389 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 GRINAQ7Z429 371 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 CCDC54Q8NEL0 328 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 TERB2Q8NHR7 220 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 KCNG3Q8TAE7 436 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 PAQR8Q8TEZ7 354 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 TAAR8Q969N4 342 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 C8orf44Q96CB5 159 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 CHRNA10Q9GZZ6 450 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 UQCC1Q9NVA1 299 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 MYEF2Q9P2K5 600 aaKnown RBP5.5□□□□□ -1.53
HERC4-209ENST00000473533 GHRLQ9UBU3 117 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 LPAR3Q9UBY5 353 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 KLK13Q9UKR3 277 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 VSIG4Q9Y279 399 aa5.5□□□□□ -1.53
HERC4-209ENST00000473533 SCN2AQ99250 2005 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 DCDC2BA2VCK2 349 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 ZNF705EA8MWA4 302 aaPredicted RBP5.49□□□□□ -1.53
HERC4-209ENST00000473533 EEF1E1-BLOC1S5C9J1V9 151 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 NPIPA5E9PKD4 350 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 HCRTR2O43614 444 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 SFT2D2O95562 160 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 NUDT14O95848 222 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 NR2C1P13056 603 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 PVRP15151 417 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 ZNF20P17024 532 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 SDHBP21912 280 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 KIR2DL1P43626 348 aaPredicted RBP5.49□□□□□ -1.53
HERC4-209ENST00000473533 MMP16P51512 607 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 CAV2P51636 162 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 SLC26A5P58743 744 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 ZP4Q12836 540 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 ATXN7L3Q14CW9 347 aaPredicted RBP5.49□□□□□ -1.53
HERC4-209ENST00000473533 ODF4Q2M2E3 257 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 ZNF585AQ6P3V2 769 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 DGAT2L6Q6ZPD8 337 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 TMEM200AQ86VY9 491 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 HOGA1Q86XE5 327 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 LDLRAD3Q86YD5 345 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 SFTPA1Q8IWL2 248 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 OR56B1Q8NGI3 324 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 OR51A4Q8NGJ6 313 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 OR10R2Q8NGX6 335 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 OR4K15Q8NH41 348 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 GLYATL2Q8WU03 294 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 DAZLQ92904 295 aaKnown RBP5.49□□□□□ -1.53
HERC4-209ENST00000473533 KTI12Q96EK9 354 aaPredicted RBP5.49□□□□□ -1.53
HERC4-209ENST00000473533 MVB12AQ96EY5 273 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 ZNF75AQ96N20 296 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 CST11Q9H112 138 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 UCK1Q9HA47 277 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 COPS7AQ9UBW8 275 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 ZMAT5Q9UDW3 170 aaKnown RBP5.49□□□□□ -1.53
HERC4-209ENST00000473533 NPIPA1Q9UND3 350 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 SCN3AQ9NY46 2000 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 TICRRQ7Z2Z1 1910 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 C13orf42A0A1B0GVH6 325 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 TMEM269A0A1B0GVZ9 245 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 LINC01553A4QN01 128 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 TMEM235A6NFC5 223 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 DBX1A6NMT0 343 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 CEACAM18A8MTB9 384 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 ALG1L2C9J202 215 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 PRAMEF26H0Y7S4 382 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 H7C1C5 153 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 EFSO43281 561 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 FOXS1O43638 330 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 PGAM2P15259 253 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 GNALP38405 381 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 RPL35P42766 123 aaKnown RBP5.49□□□□□ -1.53
HERC4-209ENST00000473533 F2RL1P55085 397 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 SUMO3P55854 103 aaPredicted RBP5.49□□□□□ -1.53
HERC4-209ENST00000473533 LCN6P62502 163 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 MRPS21P82921 87 aaKnown RBP5.49□□□□□ -1.53
HERC4-209ENST00000473533 HHEXQ03014 270 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 EGR4Q05215 589 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 OPN5Q6U736 354 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 RHOUQ7L0Q8 258 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 CASTOR1Q8WTX7 329 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms