RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 GCM1Q9NP62 436 aa11.39□□□□□ -0.59
CHD3-209ENST00000473376 EMC7Q9NPA0 242 aa11.39□□□□□ -0.59
CHD3-209ENST00000473376 RHCGQ9UBD6 479 aa11.39□□□□□ -0.59
CHD3-209ENST00000473376 MIOXQ9UGB7 285 aa11.39□□□□□ -0.59
CHD3-209ENST00000473376 OR5V1Q9UGF6 321 aa11.39□□□□□ -0.59
CHD3-209ENST00000473376 FAM32AQ9Y421 112 aaKnown RBP11.39□□□□□ -0.59
CHD3-209ENST00000473376 TRAPPC2LH3BP13 241 aa11.38□□□□□ -0.59
CHD3-209ENST00000473376 J3KTA2 159 aa11.38□□□□□ -0.59
CHD3-209ENST00000473376 ARPC3O15145 178 aa11.38□□□□□ -0.59
CHD3-209ENST00000473376 GSTA4O15217 222 aa11.38□□□□□ -0.59
CHD3-209ENST00000473376 SLC16A7O60669 478 aa11.38□□□□□ -0.59
CHD3-209ENST00000473376 ZNF682O95780 498 aa11.38□□□□□ -0.59
CHD3-209ENST00000473376 H1F0P07305 194 aaKnown RBP11.38□□□□□ -0.59
CHD3-209ENST00000473376 WNT2P09544 360 aa11.38□□□□□ -0.59
CHD3-209ENST00000473376 FUT4P22083 530 aa11.38□□□□□ -0.59
CHD3-209ENST00000473376 YAP1P46937 504 aaKnown RBP11.38□□□□□ -0.59
CHD3-209ENST00000473376 OMPP47874 163 aa11.38□□□□□ -0.59
CHD3-209ENST00000473376 SLC7A2P52569 658 aa11.38□□□□□ -0.59
CHD3-209ENST00000473376 SMIM11AP58511 58 aa11.38□□□□□ -0.59
CHD3-209ENST00000473376 PAX2Q02962 417 aa11.38□□□□□ -0.59
CHD3-209ENST00000473376 COX10Q12887 443 aa11.38□□□□□ -0.59
CHD3-209ENST00000473376 CCDC92Q53HC0 331 aaPredicted RBP11.38□□□□□ -0.59
CHD3-209ENST00000473376 TBPL2Q6SJ96 375 aa11.38□□□□□ -0.59
CHD3-209ENST00000473376 C1orf87Q8N0U7 546 aa11.38□□□□□ -0.59
CHD3-209ENST00000473376 PLEKHA8Q96JA3 519 aa11.38□□□□□ -0.59
CHD3-209ENST00000473376 DHRS1Q96LJ7 313 aa11.38□□□□□ -0.59
CHD3-209ENST00000473376 SLC30A2Q9BRI3 323 aa11.38□□□□□ -0.59
CHD3-209ENST00000473376 SYT4Q9H2B2 425 aa11.38□□□□□ -0.59
CHD3-209ENST00000473376 MMP26Q9NRE1 261 aa11.38□□□□□ -0.59
CHD3-209ENST00000473376 ABCD2Q9UBJ2 740 aa11.38□□□□□ -0.59
CHD3-209ENST00000473376 ASH2LQ9UBL3 628 aa11.38□□□□□ -0.59
CHD3-209ENST00000473376 MGAM2Q2M2H8 2515 aa11.37□□□□□ -0.59
CHD3-209ENST00000473376 LRRC30A6NM36 301 aa11.37□□□□□ -0.59
CHD3-209ENST00000473376 IQCF6A8MYZ5 107 aa11.37□□□□□ -0.59
CHD3-209ENST00000473376 NME4O00746 187 aa11.37□□□□□ -0.59
CHD3-209ENST00000473376 IDH3BO43837 385 aa11.37□□□□□ -0.59
CHD3-209ENST00000473376 SASH3O75995 380 aa11.37□□□□□ -0.59
CHD3-209ENST00000473376 SERPINA1P01009 418 aa11.37□□□□□ -0.59
CHD3-209ENST00000473376 RNASE1P07998 156 aaKnown RBP11.37□□□□□ -0.59
CHD3-209ENST00000473376 COX4I1P13073 169 aa11.37□□□□□ -0.59
CHD3-209ENST00000473376 GPR4P46093 362 aa11.37□□□□□ -0.59
CHD3-209ENST00000473376 MTNR1AP48039 350 aa11.37□□□□□ -0.59
CHD3-209ENST00000473376 MMP16P51512 607 aa11.37□□□□□ -0.59
CHD3-209ENST00000473376 IL13RA1P78552 427 aa11.37□□□□□ -0.59
CHD3-209ENST00000473376 C11orf91Q3C1V1 193 aa11.37□□□□□ -0.59
CHD3-209ENST00000473376 KRTAP27-1Q3LI81 207 aa11.37□□□□□ -0.59
CHD3-209ENST00000473376 SPRNQ5BIV9 151 aa11.37□□□□□ -0.59
CHD3-209ENST00000473376 BTNL3Q6UXE8 466 aa11.37□□□□□ -0.59
CHD3-209ENST00000473376 TSEN54Q7Z6J9 526 aaKnown RBP11.37□□□□□ -0.59
CHD3-209ENST00000473376 PLPP7Q8NBV4 271 aa11.37□□□□□ -0.59
CHD3-209ENST00000473376 Q8TCH9 128 aa11.37□□□□□ -0.59
CHD3-209ENST00000473376 ITLN1Q8WWA0 313 aa11.37□□□□□ -0.59
CHD3-209ENST00000473376 DACT3Q96B18 629 aaPredicted RBP11.37□□□□□ -0.59
CHD3-209ENST00000473376 UPRTQ96BW1 309 aa11.37□□□□□ -0.59
CHD3-209ENST00000473376 SSBP3Q9BWW4 388 aaPredicted RBP11.37□□□□□ -0.59
CHD3-209ENST00000473376 C1QTNF5Q9BXJ0 243 aa11.37□□□□□ -0.59
CHD3-209ENST00000473376 SLC22A4Q9H015 551 aa11.37□□□□□ -0.59
CHD3-209ENST00000473376 NUAK2Q9H093 628 aa11.37□□□□□ -0.59
CHD3-209ENST00000473376 PRDM13Q9H4Q3 707 aa11.37□□□□□ -0.59
CHD3-209ENST00000473376 NDUFAF4Q9P032 175 aa11.37□□□□□ -0.59
CHD3-209ENST00000473376 SAMD4AQ9UPU9 718 aaKnown RBP11.37□□□□□ -0.59
CHD3-209ENST00000473376 COA3Q9Y2R0 106 aaPredicted RBP11.37□□□□□ -0.59
CHD3-209ENST00000473376 NOP16Q9Y3C1 178 aaKnown RBP11.37□□□□□ -0.59
CHD3-209ENST00000473376 DYSFO75923 2080 aa11.37□□□□□ -0.59
CHD3-209ENST00000473376 CEACAM18A8MTB9 384 aa11.36□□□□□ -0.59
CHD3-209ENST00000473376 H7C1C5 153 aa11.36□□□□□ -0.59
CHD3-209ENST00000473376 RER1O15258 196 aa11.36□□□□□ -0.59
CHD3-209ENST00000473376 GSK3BP49841 420 aa11.36□□□□□ -0.59
CHD3-209ENST00000473376 LCN6P62502 163 aa11.36□□□□□ -0.59
CHD3-209ENST00000473376 KLF17Q5JT82 389 aaPredicted RBP11.36□□□□□ -0.59
CHD3-209ENST00000473376 NLRC3Q7RTR2 1065 aa11.36□□□□□ -0.59
CHD3-209ENST00000473376 SIGLECL1Q8N7X8 197 aa11.36□□□□□ -0.59
CHD3-209ENST00000473376 ATG16L2Q8NAA4 619 aa11.36□□□□□ -0.59
CHD3-209ENST00000473376 SLC25A28Q96A46 364 aa11.36□□□□□ -0.59
CHD3-209ENST00000473376 CMTM5Q96DZ9 223 aa11.36□□□□□ -0.59
CHD3-209ENST00000473376 RSRC1Q96IZ7 334 aaKnown RBP11.36□□□□□ -0.59
CHD3-209ENST00000473376 MEGF10Q96KG7 1140 aa11.36□□□□□ -0.59
CHD3-209ENST00000473376 C7orf34Q96L11 122 aa11.36□□□□□ -0.59
CHD3-209ENST00000473376 FUZQ9BT04 418 aa11.36□□□□□ -0.59
CHD3-209ENST00000473376 HCAR1Q9BXC0 346 aa11.36□□□□□ -0.59
CHD3-209ENST00000473376 SLITRK2Q9H156 845 aa11.36□□□□□ -0.59
CHD3-209ENST00000473376 POFUT1Q9H488 388 aa11.36□□□□□ -0.59
CHD3-209ENST00000473376 GORASP2Q9H8Y8 452 aa11.36□□□□□ -0.59
CHD3-209ENST00000473376 TMEM165Q9HC07 324 aa11.36□□□□□ -0.59
CHD3-209ENST00000473376 DCAF13Q9NV06 445 aaKnown RBP11.36□□□□□ -0.59
CHD3-209ENST00000473376 DCAF16Q9NXF7 216 aa11.36□□□□□ -0.59
CHD3-209ENST00000473376 ZNF69Q9UC07 566 aa11.36□□□□□ -0.59
CHD3-209ENST00000473376 KCNG2Q9UJ96 466 aa11.36□□□□□ -0.59
CHD3-209ENST00000473376 AURKCQ9UQB9 309 aa11.36□□□□□ -0.59
CHD3-209ENST00000473376 KIR2DS1A0A191URI9 304 aa11.35□□□□□ -0.59
CHD3-209ENST00000473376 RGS9O75916 674 aaPredicted RBP11.35□□□□□ -0.59
CHD3-209ENST00000473376 PLATP00750 562 aa11.35□□□□□ -0.59
CHD3-209ENST00000473376 CD80P33681 288 aa11.35□□□□□ -0.59
CHD3-209ENST00000473376 CDKN2AP42771 156 aaKnown RBP11.35□□□□□ -0.59
CHD3-209ENST00000473376 NPY4RP50391 375 aa11.35□□□□□ -0.59
CHD3-209ENST00000473376 FXYD6P3P58550 94 aa11.35□□□□□ -0.59
CHD3-209ENST00000473376 OCLNQ16625 522 aa11.35□□□□□ -0.59
CHD3-209ENST00000473376 ZNF404Q494X3 552 aa11.35□□□□□ -0.59
CHD3-209ENST00000473376 SLC36A3Q495N2 470 aa11.35□□□□□ -0.59
CHD3-209ENST00000473376 SMARCD3Q6STE5 483 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms