RNA–Protein interactions for RNA: ENST00000473257.1

ACTB-209, Transcript of actin beta, humanhuman

TSL 3

Gene ACTB, Length 556 nt, Biotype processed transcript, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-209ENST00000473257 SFTPBP07988 381 aa9.35□□□□□ -0.91
ACTB-209ENST00000473257 NR2C1P13056 603 aa9.35□□□□□ -0.91
ACTB-209ENST00000473257 ANOS1P23352 680 aa9.35□□□□□ -0.91
ACTB-209ENST00000473257 CENPAP49450 140 aa9.35□□□□□ -0.91
ACTB-209ENST00000473257 GNB2P62879 340 aa9.35□□□□□ -0.91
ACTB-209ENST00000473257 GUCY1A3Q02108 690 aa9.35□□□□□ -0.91
ACTB-209ENST00000473257 SCRN3Q0VDG4 424 aa9.35□□□□□ -0.91
ACTB-209ENST00000473257 KRR1Q13601 381 aaKnown RBP9.35□□□□□ -0.91
ACTB-209ENST00000473257 TRAM2Q15035 370 aa9.35□□□□□ -0.91
ACTB-209ENST00000473257 RSPO1Q2MKA7 263 aaPredicted RBP9.35□□□□□ -0.91
ACTB-209ENST00000473257 PRAMEF6Q5VXH4 476 aa9.35□□□□□ -0.91
ACTB-209ENST00000473257 FAM205BPQ63HN1 556 aa9.35□□□□□ -0.91
ACTB-209ENST00000473257 C16orf87Q6PH81 154 aa9.35□□□□□ -0.91
ACTB-209ENST00000473257 ZNF730Q6ZMV8 503 aa9.35□□□□□ -0.91
ACTB-209ENST00000473257 PTCHD4Q6ZW05 846 aa9.35□□□□□ -0.91
ACTB-209ENST00000473257 FAM122BQ7Z309 247 aa9.35□□□□□ -0.91
ACTB-209ENST00000473257 TSEN54Q7Z6J9 526 aaKnown RBP9.35□□□□□ -0.91
ACTB-209ENST00000473257 OFCC1Q8IZS5 231 aa9.35□□□□□ -0.91
ACTB-209ENST00000473257 OR2T12Q8NG77 320 aa9.35□□□□□ -0.91
ACTB-209ENST00000473257 RAB40AQ8WXH6 277 aa9.35□□□□□ -0.91
ACTB-209ENST00000473257 PTP4A1Q93096 173 aa9.35□□□□□ -0.91
ACTB-209ENST00000473257 UPRTQ96BW1 309 aa9.35□□□□□ -0.91
ACTB-209ENST00000473257 FAM46AQ96IP4 442 aaKnown RBP9.35□□□□□ -0.91
ACTB-209ENST00000473257 ZNF570Q96NI8 536 aa9.35□□□□□ -0.91
ACTB-209ENST00000473257 POLR2J2Q9GZM3 115 aaKnown RBP9.35□□□□□ -0.91
ACTB-209ENST00000473257 POLR2J3Q9H1A7 115 aaKnown RBP9.35□□□□□ -0.91
ACTB-209ENST00000473257 UFSP2Q9NUQ7 469 aa9.35□□□□□ -0.91
ACTB-209ENST00000473257 LRCH1Q9Y2L9 728 aa9.35□□□□□ -0.91
ACTB-209ENST00000473257 C5orf63A6NC05 138 aa9.34□□□□□ -0.91
ACTB-209ENST00000473257 CLDN34H7C241 214 aa9.34□□□□□ -0.91
ACTB-209ENST00000473257 DCTN6O00399 190 aa9.34□□□□□ -0.91
ACTB-209ENST00000473257 XKRYO14609 159 aa9.34□□□□□ -0.91
ACTB-209ENST00000473257 IFNA14P01570 189 aa9.34□□□□□ -0.91
ACTB-209ENST00000473257 CD14P08571 375 aa9.34□□□□□ -0.91
ACTB-209ENST00000473257 COX5BP10606 129 aa9.34□□□□□ -0.91
ACTB-209ENST00000473257 RAC2P15153 192 aa9.34□□□□□ -0.91
ACTB-209ENST00000473257 MTNR1AP48039 350 aa9.34□□□□□ -0.91
ACTB-209ENST00000473257 PITPNBP48739 271 aa9.34□□□□□ -0.91
ACTB-209ENST00000473257 SELENOWP63302 87 aa9.34□□□□□ -0.91
ACTB-209ENST00000473257 ZBED5Q49AG3 693 aa9.34□□□□□ -0.91
ACTB-209ENST00000473257 CGB2Q6NT52 195 aa9.34□□□□□ -0.91
ACTB-209ENST00000473257 ERICH5Q6P6B1 374 aa9.34□□□□□ -0.91
ACTB-209ENST00000473257 FIP1L1Q6UN15 594 aaKnown RBP9.34□□□□□ -0.91
ACTB-209ENST00000473257 BTNL3Q6UXE8 466 aa9.34□□□□□ -0.91
ACTB-209ENST00000473257 MBOAT2Q6ZWT7 520 aa9.34□□□□□ -0.91
ACTB-209ENST00000473257 SYT9Q86SS6 491 aa9.34□□□□□ -0.91
ACTB-209ENST00000473257 NAA40Q86UY6 237 aa9.34□□□□□ -0.91
ACTB-209ENST00000473257 C1orf174Q8IYL3 243 aa9.34□□□□□ -0.91
ACTB-209ENST00000473257 BOLLQ8N9W6 283 aaKnown RBP9.34□□□□□ -0.91
ACTB-209ENST00000473257 OR8G5Q8NG78 346 aa9.34□□□□□ -0.91
ACTB-209ENST00000473257 ZDHHC16Q969W1 377 aa9.34□□□□□ -0.91
ACTB-209ENST00000473257 RCN3Q96D15 328 aa9.34□□□□□ -0.91
ACTB-209ENST00000473257 NEIL1Q96FI4 390 aaPredicted RBP9.34□□□□□ -0.91
ACTB-209ENST00000473257 SH3GL1Q99961 368 aa9.34□□□□□ -0.91
ACTB-209ENST00000473257 NUDT16L1Q9BRJ7 211 aaKnown RBP9.34□□□□□ -0.91
ACTB-209ENST00000473257 PCGF1Q9BSM1 259 aa9.34□□□□□ -0.91
ACTB-209ENST00000473257 CHIAQ9BZP6 476 aa9.34□□□□□ -0.91
ACTB-209ENST00000473257 NUAK2Q9H093 628 aa9.34□□□□□ -0.91
ACTB-209ENST00000473257 RASSF4Q9H2L5 321 aa9.34□□□□□ -0.91
ACTB-209ENST00000473257 SAR1AQ9NR31 198 aa9.34□□□□□ -0.91
ACTB-209ENST00000473257 ARMCX1Q9P291 453 aa9.34□□□□□ -0.91
ACTB-209ENST00000473257 TMCC3Q9ULS5 477 aa9.34□□□□□ -0.91
ACTB-209ENST00000473257 IER3IP1Q9Y5U9 82 aa9.34□□□□□ -0.91
ACTB-209ENST00000473257 LHFPL6Q9Y693 200 aa9.34□□□□□ -0.91
ACTB-209ENST00000473257 KIR2DS1A0A191URI9 304 aa9.33□□□□□ -0.92
ACTB-209ENST00000473257 ELOVL7A1L3X0 281 aa9.33□□□□□ -0.92
ACTB-209ENST00000473257 POM121CA8CG34 1229 aa9.33□□□□□ -0.92
ACTB-209ENST00000473257 SURF4O15260 269 aa9.33□□□□□ -0.92
ACTB-209ENST00000473257 IFNW1P05000 195 aa9.33□□□□□ -0.92
ACTB-209ENST00000473257 VIMP08670 466 aaKnown RBP9.33□□□□□ -0.92
ACTB-209ENST00000473257 NCK1P16333 377 aa9.33□□□□□ -0.92
ACTB-209ENST00000473257 CDKN2AP42771 156 aaKnown RBP9.33□□□□□ -0.92
ACTB-209ENST00000473257 RAG2P55895 527 aa9.33□□□□□ -0.92
ACTB-209ENST00000473257 FXYD6P3P58550 94 aa9.33□□□□□ -0.92
ACTB-209ENST00000473257 PRB3Q04118 309 aaPredicted RBP9.33□□□□□ -0.92
ACTB-209ENST00000473257 POU4F2Q12837 409 aa9.33□□□□□ -0.92
ACTB-209ENST00000473257 AQP6Q13520 282 aa9.33□□□□□ -0.92
ACTB-209ENST00000473257 MPPED2Q15777 294 aa9.33□□□□□ -0.92
ACTB-209ENST00000473257 ZNF404Q494X3 552 aa9.33□□□□□ -0.92
ACTB-209ENST00000473257 LRRN1Q6UXK5 716 aa9.33□□□□□ -0.92
ACTB-209ENST00000473257 FBXW12Q6X9E4 464 aa9.33□□□□□ -0.92
ACTB-209ENST00000473257 C9orf139Q6ZV77 190 aa9.33□□□□□ -0.92
ACTB-209ENST00000473257 C1QL4Q86Z23 238 aa9.33□□□□□ -0.92
ACTB-209ENST00000473257 LINC00346Q8IVM7 164 aa9.33□□□□□ -0.92
ACTB-209ENST00000473257 GLB1L2Q8IW92 636 aa9.33□□□□□ -0.92
ACTB-209ENST00000473257 PDZD9Q8IXQ8 264 aa9.33□□□□□ -0.92
ACTB-209ENST00000473257 MUC20Q8N307 709 aaPredicted RBP9.33□□□□□ -0.92
ACTB-209ENST00000473257 FITM2Q8N6M3 262 aa9.33□□□□□ -0.92
ACTB-209ENST00000473257 FNDC8Q8TC99 324 aa9.33□□□□□ -0.92
ACTB-209ENST00000473257 WFDC12Q8WWY7 111 aa9.33□□□□□ -0.92
ACTB-209ENST00000473257 STON2Q8WXE9 905 aa9.33□□□□□ -0.92
ACTB-209ENST00000473257 ACOT11Q8WXI4 607 aaPredicted RBP9.33□□□□□ -0.92
ACTB-209ENST00000473257 HSH2DQ96JZ2 352 aa9.33□□□□□ -0.92
ACTB-209ENST00000473257 ZNF582Q96NG8 517 aaPredicted RBP9.33□□□□□ -0.92
ACTB-209ENST00000473257 SLC30A2Q9BRI3 323 aa9.33□□□□□ -0.92
ACTB-209ENST00000473257 ZMAT3Q9HA38 289 aaKnown RBP9.33□□□□□ -0.92
ACTB-209ENST00000473257 C1RLQ9NZP8 487 aa9.33□□□□□ -0.92
ACTB-209ENST00000473257 CTSZQ9UBR2 303 aa9.33□□□□□ -0.92
ACTB-209ENST00000473257 RPS6KA6Q9UK32 745 aa9.33□□□□□ -0.92
ACTB-209ENST00000473257 POLR1DQ9Y2S0 133 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms