RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 CNR1P21554 472 aa18.89■□□□□ 0.61
COL18A1-207ENST00000473212 DLSTP36957 453 aa18.89■□□□□ 0.61
COL18A1-207ENST00000473212 FASLGP48023 281 aa18.89■□□□□ 0.61
COL18A1-207ENST00000473212 MC2RQ01718 297 aa18.89■□□□□ 0.61
COL18A1-207ENST00000473212 PLCXD2Q0VAA5 305 aa18.89■□□□□ 0.61
COL18A1-207ENST00000473212 OR2F1Q13607 317 aa18.89■□□□□ 0.61
COL18A1-207ENST00000473212 CDNFQ49AH0 187 aa18.89■□□□□ 0.61
COL18A1-207ENST00000473212 LANCL3Q6ZV70 420 aa18.89■□□□□ 0.61
COL18A1-207ENST00000473212 OR2W3Q7Z3T1 314 aa18.89■□□□□ 0.61
COL18A1-207ENST00000473212 OR4D6Q8NGJ1 314 aa18.89■□□□□ 0.61
COL18A1-207ENST00000473212 OR52N5Q8NH56 324 aa18.89■□□□□ 0.61
COL18A1-207ENST00000473212 OIT3Q8WWZ8 545 aa18.89■□□□□ 0.61
COL18A1-207ENST00000473212 TBL1XR1Q9BZK7 514 aa18.89■□□□□ 0.61
COL18A1-207ENST00000473212 HHLA2Q9UM44 414 aa18.89■□□□□ 0.61
COL18A1-207ENST00000473212 IGKV3D-11A0A0A0MRZ8 115 aa18.89■□□□□ 0.61
COL18A1-207ENST00000473212 TMED7-TICAM2A0A0A6YYA0 188 aa18.89■□□□□ 0.61
COL18A1-207ENST00000473212 LOC107986453A0A1B0GWG9 222 aa18.89■□□□□ 0.61
COL18A1-207ENST00000473212 RNF222A6NCQ9 220 aa18.89■□□□□ 0.61
COL18A1-207ENST00000473212 SLC25A4P12235 298 aa18.89■□□□□ 0.61
COL18A1-207ENST00000473212 GP1BBP13224 206 aa18.89■□□□□ 0.61
COL18A1-207ENST00000473212 BLKP51451 505 aa18.89■□□□□ 0.61
COL18A1-207ENST00000473212 CCR5P51681 352 aa18.89■□□□□ 0.61
COL18A1-207ENST00000473212 CXADRP78310 365 aa18.89■□□□□ 0.61
COL18A1-207ENST00000473212 ZNF345Q14585 488 aa18.89■□□□□ 0.61
COL18A1-207ENST00000473212 COL13A1Q5TAT6 717 aaPredicted RBP18.89■□□□□ 0.61
COL18A1-207ENST00000473212 CMBLQ96DG6 245 aa18.89■□□□□ 0.61
COL18A1-207ENST00000473212 TMED7Q9Y3B3 224 aa18.89■□□□□ 0.61
COL18A1-207ENST00000473212 ABCD3P28288 659 aa18.88■□□□□ 0.61
COL18A1-207ENST00000473212 SRSF4Q08170 494 aaKnown RBP18.88■□□□□ 0.61
COL18A1-207ENST00000473212 PPP1R1AQ13522 171 aa18.88■□□□□ 0.61
COL18A1-207ENST00000473212 ZNF169Q14929 603 aaPredicted RBP18.88■□□□□ 0.61
COL18A1-207ENST00000473212 ELOCQ15369 112 aa18.88■□□□□ 0.61
COL18A1-207ENST00000473212 NSDHLQ15738 373 aa18.88■□□□□ 0.61
COL18A1-207ENST00000473212 LPCAT3Q6P1A2 487 aa18.88■□□□□ 0.61
COL18A1-207ENST00000473212 TMEM185AQ8NFB2 350 aa18.88■□□□□ 0.61
COL18A1-207ENST00000473212 OR14I1A6ND48 311 aa18.88■□□□□ 0.61
COL18A1-207ENST00000473212 WIPF3A6NGB9 483 aa18.88■□□□□ 0.61
COL18A1-207ENST00000473212 DISC1C4P0D8 188 aa18.88■□□□□ 0.61
COL18A1-207ENST00000473212 TSPAN2O60636 221 aa18.88■□□□□ 0.61
COL18A1-207ENST00000473212 MT-ATP6P00846 226 aa18.88■□□□□ 0.61
COL18A1-207ENST00000473212 SLC22A6Q4U2R8 563 aa18.88■□□□□ 0.61
COL18A1-207ENST00000473212 TMEM17Q86X19 198 aa18.88■□□□□ 0.61
COL18A1-207ENST00000473212 GVQW1Q8N7I0 195 aa18.88■□□□□ 0.61
COL18A1-207ENST00000473212 CST11Q9H112 138 aa18.88■□□□□ 0.61
COL18A1-207ENST00000473212 R4GMQ9 66 aa18.88■□□□□ 0.61
COL18A1-207ENST00000473212 FRYLO94915 3013 aa18.87■□□□□ 0.61
COL18A1-207ENST00000473212 C2CD4DB7Z1M9 353 aa18.87■□□□□ 0.61
COL18A1-207ENST00000473212 EIF1AYO14602 144 aaKnown RBP18.87■□□□□ 0.61
COL18A1-207ENST00000473212 SRSF10O75494 262 aaKnown RBP18.87■□□□□ 0.61
COL18A1-207ENST00000473212 CD37P11049 281 aa18.87■□□□□ 0.61
COL18A1-207ENST00000473212 ZBTB25P24278 435 aa18.87■□□□□ 0.61
COL18A1-207ENST00000473212 RHOUQ7L0Q8 258 aa18.87■□□□□ 0.61
COL18A1-207ENST00000473212 FJX1Q86VR8 437 aa18.87■□□□□ 0.61
COL18A1-207ENST00000473212 THAP3Q8WTV1 239 aaPredicted RBP18.87■□□□□ 0.61
COL18A1-207ENST00000473212 ZNF416Q9BWM5 594 aa18.87■□□□□ 0.61
COL18A1-207ENST00000473212 ARPC4-TTLL3A0A0A6YYG9 625 aa18.87■□□□□ 0.61
COL18A1-207ENST00000473212 MEGF11A6BM72 1044 aa18.87■□□□□ 0.61
COL18A1-207ENST00000473212 H3BMH7 237 aa18.87■□□□□ 0.61
COL18A1-207ENST00000473212 DXOO77932 396 aaKnown RBP18.87■□□□□ 0.61
COL18A1-207ENST00000473212 DCNP07585 359 aaKnown RBP18.87■□□□□ 0.61
COL18A1-207ENST00000473212 PGCP20142 388 aa18.87■□□□□ 0.61
COL18A1-207ENST00000473212 AVPR2P30518 371 aa18.87■□□□□ 0.61
COL18A1-207ENST00000473212 GLO1Q04760 184 aa18.87■□□□□ 0.61
COL18A1-207ENST00000473212 RNASE10Q5GAN6 216 aaKnown RBP18.87■□□□□ 0.61
COL18A1-207ENST00000473212 C1orf140Q5VVS0 124 aa18.87■□□□□ 0.61
COL18A1-207ENST00000473212 OR52W1Q6IF63 320 aa18.87■□□□□ 0.61
COL18A1-207ENST00000473212 ACOT7LQ6ZUV0 252 aa18.87■□□□□ 0.61
COL18A1-207ENST00000473212 LYG2Q86SG7 212 aa18.87■□□□□ 0.61
COL18A1-207ENST00000473212 SLC25A42Q86VD7 318 aa18.87■□□□□ 0.61
COL18A1-207ENST00000473212 MRGPRFQ96AM1 343 aa18.87■□□□□ 0.61
COL18A1-207ENST00000473212 ARL5BQ96KC2 179 aa18.87■□□□□ 0.61
COL18A1-207ENST00000473212 G6PC2Q9NQR9 355 aa18.87■□□□□ 0.61
COL18A1-207ENST00000473212 GDF2Q9UK05 429 aaPredicted RBP18.87■□□□□ 0.61
COL18A1-207ENST00000473212 OR52A1Q9UKL2 312 aa18.87■□□□□ 0.61
COL18A1-207ENST00000473212 ATXN7L1Q9ULK2 861 aaPredicted RBP18.87■□□□□ 0.61
COL18A1-207ENST00000473212 TLCD2A6NGC4 264 aa18.86■□□□□ 0.61
COL18A1-207ENST00000473212 TMEM200CA6NKL6 621 aa18.86■□□□□ 0.61
COL18A1-207ENST00000473212 SHISA8B8ZZ34 492 aa18.86■□□□□ 0.61
COL18A1-207ENST00000473212 SOX1O00570 391 aaPredicted RBP18.86■□□□□ 0.61
COL18A1-207ENST00000473212 KCNAB3O43448 404 aa18.86■□□□□ 0.61
COL18A1-207ENST00000473212 ZNF354AO60765 605 aaPredicted RBP18.86■□□□□ 0.61
COL18A1-207ENST00000473212 GP1BAP07359 652 aa18.86■□□□□ 0.61
COL18A1-207ENST00000473212 SMAD2Q15796 467 aaKnown RBP18.86■□□□□ 0.61
COL18A1-207ENST00000473212 TRAPPC6BQ86SZ2 158 aa18.86■□□□□ 0.61
COL18A1-207ENST00000473212 CLRN3Q8NCR9 226 aa18.86■□□□□ 0.61
COL18A1-207ENST00000473212 WWTR1Q9GZV5 400 aa18.86■□□□□ 0.61
COL18A1-207ENST00000473212 PHF3Q92576 2039 aaKnown RBP18.86■□□□□ 0.61
COL18A1-207ENST00000473212 A0A0A6YYH2 397 aa18.85■□□□□ 0.61
COL18A1-207ENST00000473212 A6NJ64 397 aa18.85■□□□□ 0.61
COL18A1-207ENST00000473212 ALG1L2C9J202 215 aa18.85■□□□□ 0.61
COL18A1-207ENST00000473212 PLPP3O14495 311 aa18.85■□□□□ 0.61
COL18A1-207ENST00000473212 NPIPB7O75200 414 aa18.85■□□□□ 0.61
COL18A1-207ENST00000473212 ARRB1P49407 418 aaPredicted RBP18.85■□□□□ 0.61
COL18A1-207ENST00000473212 OR1D5P58170 312 aa18.85■□□□□ 0.61
COL18A1-207ENST00000473212 PPIAP62937 165 aaKnown RBP18.85■□□□□ 0.61
COL18A1-207ENST00000473212 MEF2DQ14814 521 aa18.85■□□□□ 0.61
COL18A1-207ENST00000473212 HLA-DQA1Q5Y7H0 255 aa18.85■□□□□ 0.61
COL18A1-207ENST00000473212 DCXRQ7Z4W1 244 aa18.85■□□□□ 0.61
COL18A1-207ENST00000473212 CHST4Q8NCG5 386 aa18.85■□□□□ 0.61
COL18A1-207ENST00000473212 OR1L3Q8NH93 324 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms