RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 PARPBPQ9NWS1 579 aa9.09□□□□□ -0.95
APTX-216ENST00000472896 STEAP1Q9UHE8 339 aa9.09□□□□□ -0.95
APTX-216ENST00000472896 UNC13CQ8NB66 2214 aa9.08□□□□□ -0.96
APTX-216ENST00000472896 USP9YO00507 2555 aaPredicted RBP9.08□□□□□ -0.96
APTX-216ENST00000472896 NOTCH2Q04721 2471 aa9.08□□□□□ -0.96
APTX-216ENST00000472896 TMEM238LA0A1B0GVL6 79 aa9.08□□□□□ -0.96
APTX-216ENST00000472896 C9orf172C9J069 976 aa9.08□□□□□ -0.96
APTX-216ENST00000472896 RAB3DO95716 219 aa9.08□□□□□ -0.96
APTX-216ENST00000472896 AGR2O95994 175 aa9.08□□□□□ -0.96
APTX-216ENST00000472896 WNT11O96014 354 aa9.08□□□□□ -0.96
APTX-216ENST00000472896 AK1P00568 194 aa9.08□□□□□ -0.96
APTX-216ENST00000472896 IL2RAP01589 272 aa9.08□□□□□ -0.96
APTX-216ENST00000472896 PRNPP04156 253 aa9.08□□□□□ -0.96
APTX-216ENST00000472896 RPN2P04844 631 aa9.08□□□□□ -0.96
APTX-216ENST00000472896 HMGN2P05204 90 aaKnown RBP9.08□□□□□ -0.96
APTX-216ENST00000472896 HKR1P10072 659 aa9.08□□□□□ -0.96
APTX-216ENST00000472896 PTHLHP12272 177 aa9.08□□□□□ -0.96
APTX-216ENST00000472896 ADRB3P13945 408 aa9.08□□□□□ -0.96
APTX-216ENST00000472896 ZNF16P17020 682 aaPredicted RBP9.08□□□□□ -0.96
APTX-216ENST00000472896 ACKR3P25106 362 aa9.08□□□□□ -0.96
APTX-216ENST00000472896 SLC6A6P31641 620 aa9.08□□□□□ -0.96
APTX-216ENST00000472896 PKIAP61925 76 aa9.08□□□□□ -0.96
APTX-216ENST00000472896 RPS15P62841 145 aaKnown RBP9.08□□□□□ -0.96
APTX-216ENST00000472896 POLR2LP62875 67 aaKnown RBP9.08□□□□□ -0.96
APTX-216ENST00000472896 HGFACQ04756 655 aa9.08□□□□□ -0.96
APTX-216ENST00000472896 CHAF1BQ13112 559 aa9.08□□□□□ -0.96
APTX-216ENST00000472896 DHRS2Q13268 280 aa9.08□□□□□ -0.96
APTX-216ENST00000472896 RBM39Q14498 530 aaKnown RBP9.08□□□□□ -0.96
APTX-216ENST00000472896 TCEA2Q15560 299 aa9.08□□□□□ -0.96
APTX-216ENST00000472896 Q499Y3 187 aa9.08□□□□□ -0.96
APTX-216ENST00000472896 SLC35D3Q5M8T2 416 aa9.08□□□□□ -0.96
APTX-216ENST00000472896 ATPAF1Q5TC12 328 aaPredicted RBP9.08□□□□□ -0.96
APTX-216ENST00000472896 RFLNAQ6ZTI6 216 aa9.08□□□□□ -0.96
APTX-216ENST00000472896 HIST2H3AQ71DI3 136 aa9.08□□□□□ -0.96
APTX-216ENST00000472896 LYG2Q86SG7 212 aa9.08□□□□□ -0.96
APTX-216ENST00000472896 LRRTM1Q86UE6 522 aa9.08□□□□□ -0.96
APTX-216ENST00000472896 PAQR4Q8N4S7 273 aaPredicted RBP9.08□□□□□ -0.96
APTX-216ENST00000472896 ZNF383Q8NA42 475 aa9.08□□□□□ -0.96
APTX-216ENST00000472896 AKR7LQ8NHP1 331 aa9.08□□□□□ -0.96
APTX-216ENST00000472896 ADAMTS17Q8TE56 1095 aa9.08□□□□□ -0.96
APTX-216ENST00000472896 TMEM239Q8WW34 195 aa9.08□□□□□ -0.96
APTX-216ENST00000472896 THRSPQ92748 146 aa9.08□□□□□ -0.96
APTX-216ENST00000472896 SLAMF9Q96A28 289 aa9.08□□□□□ -0.96
APTX-216ENST00000472896 OR7D2Q96RA2 312 aa9.08□□□□□ -0.96
APTX-216ENST00000472896 AIF1LQ9BQI0 150 aa9.08□□□□□ -0.96
APTX-216ENST00000472896 PRSS27Q9BQR3 290 aa9.08□□□□□ -0.96
APTX-216ENST00000472896 ACTRT3Q9BYD9 372 aa9.08□□□□□ -0.96
APTX-216ENST00000472896 CHST5Q9GZS9 411 aa9.08□□□□□ -0.96
APTX-216ENST00000472896 MEPEQ9NQ76 525 aaPredicted RBP9.08□□□□□ -0.96
APTX-216ENST00000472896 APOBEC3BQ9UH17 382 aaKnown RBP9.08□□□□□ -0.96
APTX-216ENST00000472896 IL36AQ9UHA7 158 aa9.08□□□□□ -0.96
APTX-216ENST00000472896 SERTAD3Q9UJW9 196 aa9.08□□□□□ -0.96
APTX-216ENST00000472896 GNG8Q9UK08 70 aa9.08□□□□□ -0.96
APTX-216ENST00000472896 SIGLEC7Q9Y286 467 aa9.08□□□□□ -0.96
APTX-216ENST00000472896 ZNF443Q9Y2A4 671 aaPredicted RBP9.08□□□□□ -0.96
APTX-216ENST00000472896 LOXL2Q9Y4K0 774 aa9.08□□□□□ -0.96
APTX-216ENST00000472896 LRRK2Q5S007 2527 aa9.08□□□□□ -0.96
APTX-216ENST00000472896 SPTAN1Q13813 2472 aaKnown RBP9.07□□□□□ -0.96
APTX-216ENST00000472896 TSPAN11A1L157 253 aa9.07□□□□□ -0.96
APTX-216ENST00000472896 TMEM202A6NGA9 273 aa9.07□□□□□ -0.96
APTX-216ENST00000472896 OR2AG2A6NM03 316 aa9.07□□□□□ -0.96
APTX-216ENST00000472896 FRS3O43559 492 aa9.07□□□□□ -0.96
APTX-216ENST00000472896 MTX2O75431 263 aa9.07□□□□□ -0.96
APTX-216ENST00000472896 CTAG2O75638 210 aa9.07□□□□□ -0.96
APTX-216ENST00000472896 NTN1O95631 604 aa9.07□□□□□ -0.96
APTX-216ENST00000472896 CD3DP04234 171 aa9.07□□□□□ -0.96
APTX-216ENST00000472896 HIST1H1BP16401 226 aaKnown RBP9.07□□□□□ -0.96
APTX-216ENST00000472896 MAKP20794 623 aa9.07□□□□□ -0.96
APTX-216ENST00000472896 MPZP25189 248 aa9.07□□□□□ -0.96
APTX-216ENST00000472896 PSMB6P28072 239 aa9.07□□□□□ -0.96
APTX-216ENST00000472896 CCKBRP32239 447 aa9.07□□□□□ -0.96
APTX-216ENST00000472896 MAP3K8P41279 467 aa9.07□□□□□ -0.96
APTX-216ENST00000472896 PRKAG1P54619 331 aa9.07□□□□□ -0.96
APTX-216ENST00000472896 CLDN12P56749 244 aa9.07□□□□□ -0.96
APTX-216ENST00000472896 MEF2AQ02078 507 aaPredicted RBP9.07□□□□□ -0.96
APTX-216ENST00000472896 ZFP36L1Q07352 338 aaKnown RBP9.07□□□□□ -0.96
APTX-216ENST00000472896 SGCGQ13326 291 aa9.07□□□□□ -0.96
APTX-216ENST00000472896 EIF3IQ13347 325 aaKnown RBP9.07□□□□□ -0.96
APTX-216ENST00000472896 TSTA3Q13630 321 aaPredicted RBP9.07□□□□□ -0.96
APTX-216ENST00000472896 LASP1Q14847 261 aaKnown RBP9.07□□□□□ -0.96
APTX-216ENST00000472896 RHEBQ15382 184 aa9.07□□□□□ -0.96
APTX-216ENST00000472896 NKAIN2Q5VXU1 208 aa9.07□□□□□ -0.96
APTX-216ENST00000472896 OLIG3Q7RTU3 272 aa9.07□□□□□ -0.96
APTX-216ENST00000472896 SLC25A42Q86VD7 318 aa9.07□□□□□ -0.96
APTX-216ENST00000472896 ZDHHC22Q8N966 263 aa9.07□□□□□ -0.96
APTX-216ENST00000472896 OR56B1Q8NGI3 324 aa9.07□□□□□ -0.96
APTX-216ENST00000472896 OR10R2Q8NGX6 335 aa9.07□□□□□ -0.96
APTX-216ENST00000472896 OR2G2Q8NGZ5 317 aa9.07□□□□□ -0.96
APTX-216ENST00000472896 MITD1Q8WV92 249 aa9.07□□□□□ -0.96
APTX-216ENST00000472896 RSC1A1Q92681 617 aa9.07□□□□□ -0.96
APTX-216ENST00000472896 KIRREL1Q96J84 757 aa9.07□□□□□ -0.96
APTX-216ENST00000472896 PHB2Q99623 299 aa9.07□□□□□ -0.96
APTX-216ENST00000472896 PDCD1LG2Q9BQ51 273 aa9.07□□□□□ -0.96
APTX-216ENST00000472896 SULT4A1Q9BR01 284 aa9.07□□□□□ -0.96
APTX-216ENST00000472896 STRADBQ9C0K7 418 aa9.07□□□□□ -0.96
APTX-216ENST00000472896 LAT2Q9GZY6 243 aa9.07□□□□□ -0.96
APTX-216ENST00000472896 MTHFD2LQ9H903 347 aaPredicted RBP9.07□□□□□ -0.96
APTX-216ENST00000472896 CYTL1Q9NRR1 136 aa9.07□□□□□ -0.96
APTX-216ENST00000472896 B4GALT6Q9UBX8 382 aa9.07□□□□□ -0.96
APTX-216ENST00000472896 UTP20O75691 2785 aaKnown RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms