RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 FBXW12Q6X9E4 464 aa12.9□□□□□ -0.34
VTI1A-203ENST00000472892 LRRC28Q86X40 367 aaPredicted RBP12.9□□□□□ -0.34
VTI1A-203ENST00000472892 OR6V1Q8N148 313 aa12.9□□□□□ -0.34
VTI1A-203ENST00000472892 GJC3Q8NFK1 279 aa12.9□□□□□ -0.34
VTI1A-203ENST00000472892 NANPQ8TBE9 248 aa12.9□□□□□ -0.34
VTI1A-203ENST00000472892 TSSK2Q96PF2 358 aa12.9□□□□□ -0.34
VTI1A-203ENST00000472892 ERMAPQ96PL5 475 aaPredicted RBP12.9□□□□□ -0.34
VTI1A-203ENST00000472892 C7orf69Q9H7B7 122 aa12.9□□□□□ -0.34
VTI1A-203ENST00000472892 UBAP1Q9NZ09 502 aa12.9□□□□□ -0.34
VTI1A-203ENST00000472892 CD300AQ9UGN4 299 aa12.9□□□□□ -0.34
VTI1A-203ENST00000472892 OPN4Q9UHM6 478 aa12.9□□□□□ -0.34
VTI1A-203ENST00000472892 B9D1Q9UPM9 204 aa12.9□□□□□ -0.34
VTI1A-203ENST00000472892 LHFPL6Q9Y693 200 aa12.9□□□□□ -0.34
VTI1A-203ENST00000472892 SURF4O15260 269 aa12.89□□□□□ -0.35
VTI1A-203ENST00000472892 FOXH1O75593 365 aa12.89□□□□□ -0.35
VTI1A-203ENST00000472892 GADD45GO95257 159 aa12.89□□□□□ -0.35
VTI1A-203ENST00000472892 PPP1R3DO95685 299 aa12.89□□□□□ -0.35
VTI1A-203ENST00000472892 RBMXP38159 391 aaKnown RBP12.89□□□□□ -0.35
VTI1A-203ENST00000472892 LCN2P80188 198 aa12.89□□□□□ -0.35
VTI1A-203ENST00000472892 COX10Q12887 443 aa12.89□□□□□ -0.35
VTI1A-203ENST00000472892 HLXQ14774 488 aaPredicted RBP12.89□□□□□ -0.35
VTI1A-203ENST00000472892 MEP1BQ16820 701 aa12.89□□□□□ -0.35
VTI1A-203ENST00000472892 RSPO1Q2MKA7 263 aaPredicted RBP12.89□□□□□ -0.35
VTI1A-203ENST00000472892 TMEM155Q4W5P6 130 aa12.89□□□□□ -0.35
VTI1A-203ENST00000472892 DNM1P34Q6PK57 102 aa12.89□□□□□ -0.35
VTI1A-203ENST00000472892 ZNF771Q7L3S4 317 aaPredicted RBP12.89□□□□□ -0.35
VTI1A-203ENST00000472892 OR5L1Q8NGL2 311 aa12.89□□□□□ -0.35
VTI1A-203ENST00000472892 ST7LQ8TDW4 575 aa12.89□□□□□ -0.35
VTI1A-203ENST00000472892 ITLN1Q8WWA0 313 aa12.89□□□□□ -0.35
VTI1A-203ENST00000472892 APOBEC3DQ96AK3 386 aaPredicted RBP12.89□□□□□ -0.35
VTI1A-203ENST00000472892 SIGLEC11Q96RL6 698 aa12.89□□□□□ -0.35
VTI1A-203ENST00000472892 COQ7Q99807 217 aa12.89□□□□□ -0.35
VTI1A-203ENST00000472892 OR52D1Q9H346 318 aa12.89□□□□□ -0.35
VTI1A-203ENST00000472892 SRA1Q9HD15 236 aaKnown RBP12.89□□□□□ -0.35
VTI1A-203ENST00000472892 MAGEL2Q9UJ55 1249 aa12.89□□□□□ -0.35
VTI1A-203ENST00000472892 POLR3KQ9Y2Y1 108 aaPredicted RBP12.89□□□□□ -0.35
VTI1A-203ENST00000472892 FSHBP01225 129 aa12.88□□□□□ -0.35
VTI1A-203ENST00000472892 ADRA2CP18825 462 aa12.88□□□□□ -0.35
VTI1A-203ENST00000472892 FPR3P25089 353 aa12.88□□□□□ -0.35
VTI1A-203ENST00000472892 SLC6A6P31641 620 aa12.88□□□□□ -0.35
VTI1A-203ENST00000472892 MSX2P35548 267 aaPredicted RBP12.88□□□□□ -0.35
VTI1A-203ENST00000472892 CENPAP49450 140 aa12.88□□□□□ -0.35
VTI1A-203ENST00000472892 BTG1P62324 171 aa12.88□□□□□ -0.35
VTI1A-203ENST00000472892 KRTAP27-1Q3LI81 207 aa12.88□□□□□ -0.35
VTI1A-203ENST00000472892 SLC27A4Q6P1M0 643 aa12.88□□□□□ -0.35
VTI1A-203ENST00000472892 LEG1Q6P5S2 330 aa12.88□□□□□ -0.35
VTI1A-203ENST00000472892 CPLX4Q7Z7G2 160 aa12.88□□□□□ -0.35
VTI1A-203ENST00000472892 ZBTB46Q86UZ6 589 aa12.88□□□□□ -0.35
VTI1A-203ENST00000472892 PGAM4Q8N0Y7 254 aa12.88□□□□□ -0.35
VTI1A-203ENST00000472892 KLHL36Q8N4N3 616 aa12.88□□□□□ -0.35
VTI1A-203ENST00000472892 SPICQ8N5J4 248 aa12.88□□□□□ -0.35
VTI1A-203ENST00000472892 OR8G5Q8NG78 346 aa12.88□□□□□ -0.35
VTI1A-203ENST00000472892 FANK1Q8TC84 345 aa12.88□□□□□ -0.35
VTI1A-203ENST00000472892 FAM216AQ8WUB2 273 aa12.88□□□□□ -0.35
VTI1A-203ENST00000472892 OR2V2Q96R30 315 aa12.88□□□□□ -0.35
VTI1A-203ENST00000472892 CDRT15Q96T59 188 aa12.88□□□□□ -0.35
VTI1A-203ENST00000472892 NMNAT3Q96T66 252 aa12.88□□□□□ -0.35
VTI1A-203ENST00000472892 FAM107BQ9H098 131 aa12.88□□□□□ -0.35
VTI1A-203ENST00000472892 HDHD2Q9H0R4 259 aa12.88□□□□□ -0.35
VTI1A-203ENST00000472892 PATZ1Q9HBE1 687 aaKnown RBP12.88□□□□□ -0.35
VTI1A-203ENST00000472892 GCM1Q9NP62 436 aa12.88□□□□□ -0.35
VTI1A-203ENST00000472892 PTTG3PQ9NZH4 202 aa12.88□□□□□ -0.35
VTI1A-203ENST00000472892 PPP1R3CQ9UQK1 317 aa12.88□□□□□ -0.35
VTI1A-203ENST00000472892 V9GYQ6 96 aa12.88□□□□□ -0.35
VTI1A-203ENST00000472892 TANC2Q9HCD6 1990 aa12.88□□□□□ -0.35
VTI1A-203ENST00000472892 TMEM178BH3BS89 294 aa12.87□□□□□ -0.35
VTI1A-203ENST00000472892 IDH3BO43837 385 aa12.87□□□□□ -0.35
VTI1A-203ENST00000472892 OR10H3O60404 316 aa12.87□□□□□ -0.35
VTI1A-203ENST00000472892 RGS9O75916 674 aaPredicted RBP12.87□□□□□ -0.35
VTI1A-203ENST00000472892 RENP00797 406 aa12.87□□□□□ -0.35
VTI1A-203ENST00000472892 HIST1H1CP16403 213 aaKnown RBP12.87□□□□□ -0.35
VTI1A-203ENST00000472892 IFNGR2P38484 337 aa12.87□□□□□ -0.35
VTI1A-203ENST00000472892 SLC6A9P48067 706 aa12.87□□□□□ -0.35
VTI1A-203ENST00000472892 GSSP48637 474 aa12.87□□□□□ -0.35
VTI1A-203ENST00000472892 SPIBQ01892 262 aa12.87□□□□□ -0.35
VTI1A-203ENST00000472892 ZMYND11Q15326 602 aa12.87□□□□□ -0.35
VTI1A-203ENST00000472892 SAMD4BQ5PRF9 694 aaKnown RBP12.87□□□□□ -0.35
VTI1A-203ENST00000472892 OR2T2Q6IF00 324 aa12.87□□□□□ -0.35
VTI1A-203ENST00000472892 CORO6Q6QEF8 472 aa12.87□□□□□ -0.35
VTI1A-203ENST00000472892 C12orf54Q6X4T0 127 aa12.87□□□□□ -0.35
VTI1A-203ENST00000472892 COLCA1Q6ZS62 124 aa12.87□□□□□ -0.35
VTI1A-203ENST00000472892 JAZF1Q86VZ6 243 aa12.87□□□□□ -0.35
VTI1A-203ENST00000472892 ATG16L2Q8NAA4 619 aa12.87□□□□□ -0.35
VTI1A-203ENST00000472892 SLC26A10Q8NG04 563 aa12.87□□□□□ -0.35
VTI1A-203ENST00000472892 OR13G1Q8NGZ3 307 aa12.87□□□□□ -0.35
VTI1A-203ENST00000472892 OR4K13Q8NH42 304 aa12.87□□□□□ -0.35
VTI1A-203ENST00000472892 MCUR1Q96AQ8 359 aa12.87□□□□□ -0.35
VTI1A-203ENST00000472892 NSMCE2Q96MF7 247 aa12.87□□□□□ -0.35
VTI1A-203ENST00000472892 ZNF582Q96NG8 517 aaPredicted RBP12.87□□□□□ -0.35
VTI1A-203ENST00000472892 JMJD8Q96S16 334 aa12.87□□□□□ -0.35
VTI1A-203ENST00000472892 IFT27Q9BW83 186 aa12.87□□□□□ -0.35
VTI1A-203ENST00000472892 NSRP1Q9H0G5 558 aaKnown RBP12.87□□□□□ -0.35
VTI1A-203ENST00000472892 IL1RAPQ9NPH3 570 aa12.87□□□□□ -0.35
VTI1A-203ENST00000472892 MMP26Q9NRE1 261 aa12.87□□□□□ -0.35
VTI1A-203ENST00000472892 POLR1DQ9Y2S0 133 aa12.87□□□□□ -0.35
VTI1A-203ENST00000472892 DYSFO75923 2080 aa12.87□□□□□ -0.35
VTI1A-203ENST00000472892 A0A1B0GWJ7 208 aa12.86□□□□□ -0.35
VTI1A-203ENST00000472892 OR6C68A6NDL8 312 aa12.86□□□□□ -0.35
VTI1A-203ENST00000472892 TRAPPC2LH3BP13 241 aa12.86□□□□□ -0.35
VTI1A-203ENST00000472892 TRIM77I1YAP6 450 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms