RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 NPIPB4C9JG80 1138 aa2.96□□□□□ -1.94
XRN1-209ENST00000472625 AP4M1O00189 453 aa2.96□□□□□ -1.94
XRN1-209ENST00000472625 TIMM23O14925 209 aa2.96□□□□□ -1.94
XRN1-209ENST00000472625 UBDO15205 165 aa2.96□□□□□ -1.94
XRN1-209ENST00000472625 POLR3GO15318 223 aaPredicted RBP2.96□□□□□ -1.94
XRN1-209ENST00000472625 RNF13O43567 381 aa2.96□□□□□ -1.94
XRN1-209ENST00000472625 PLPP2O43688 288 aa2.96□□□□□ -1.94
XRN1-209ENST00000472625 SPAG7O75391 227 aa2.96□□□□□ -1.94
XRN1-209ENST00000472625 IGF2P01344 180 aa2.96□□□□□ -1.94
XRN1-209ENST00000472625 CD55P08174 381 aa2.96□□□□□ -1.94
XRN1-209ENST00000472625 ADORA3P0DMS8 318 aa2.96□□□□□ -1.94
XRN1-209ENST00000472625 UMPSP11172 480 aa2.96□□□□□ -1.94
XRN1-209ENST00000472625 ETFAP13804 333 aa2.96□□□□□ -1.94
XRN1-209ENST00000472625 MDH2P40926 338 aaKnown RBP2.96□□□□□ -1.94
XRN1-209ENST00000472625 GDI2P50395 445 aaKnown RBP2.96□□□□□ -1.94
XRN1-209ENST00000472625 POLR2JP52435 117 aaKnown RBP2.96□□□□□ -1.94
XRN1-209ENST00000472625 UCP2P55851 309 aa2.96□□□□□ -1.94
XRN1-209ENST00000472625 LMO4P61968 165 aa2.96□□□□□ -1.94
XRN1-209ENST00000472625 CCL8P80075 99 aa2.96□□□□□ -1.94
XRN1-209ENST00000472625 CDK6Q00534 326 aa2.96□□□□□ -1.94
XRN1-209ENST00000472625 EGR4Q05215 589 aa2.96□□□□□ -1.94
XRN1-209ENST00000472625 BNIP2Q12982 314 aa2.96□□□□□ -1.94
XRN1-209ENST00000472625 BAMBIQ13145 260 aa2.96□□□□□ -1.94
XRN1-209ENST00000472625 RGNQ15493 299 aa2.96□□□□□ -1.94
XRN1-209ENST00000472625 NPTX1Q15818 432 aa2.96□□□□□ -1.94
XRN1-209ENST00000472625 KCNJ8Q15842 424 aa2.96□□□□□ -1.94
XRN1-209ENST00000472625 ANKDD1AQ495B1 522 aa2.96□□□□□ -1.94
XRN1-209ENST00000472625 TMEM155Q4W5P6 130 aa2.96□□□□□ -1.94
XRN1-209ENST00000472625 PDLIM3Q53GG5 364 aaPredicted RBP2.96□□□□□ -1.94
XRN1-209ENST00000472625 ESCO2Q56NI9 601 aa2.96□□□□□ -1.94
XRN1-209ENST00000472625 CEP85LQ5SZL2 805 aa2.96□□□□□ -1.94
XRN1-209ENST00000472625 HHATQ5VTY9 493 aa2.96□□□□□ -1.94
XRN1-209ENST00000472625 CARD17Q5XLA6 110 aa2.96□□□□□ -1.94
XRN1-209ENST00000472625 SLC27A4Q6P1M0 643 aa2.96□□□□□ -1.94
XRN1-209ENST00000472625 TTC33Q6PID6 262 aaPredicted RBP2.96□□□□□ -1.94
XRN1-209ENST00000472625 LRRN1Q6UXK5 716 aa2.96□□□□□ -1.94
XRN1-209ENST00000472625 SLC35D2Q76EJ3 337 aa2.96□□□□□ -1.94
XRN1-209ENST00000472625 LINGO2Q7L985 606 aa2.96□□□□□ -1.94
XRN1-209ENST00000472625 NANOGNBQ7Z5D8 188 aa2.96□□□□□ -1.94
XRN1-209ENST00000472625 PTOV1Q86YD1 416 aa2.96□□□□□ -1.94
XRN1-209ENST00000472625 ARMC8Q8IUR7 673 aa2.96□□□□□ -1.94
XRN1-209ENST00000472625 C1orf87Q8N0U7 546 aa2.96□□□□□ -1.94
XRN1-209ENST00000472625 C17orf53Q8N3J3 647 aaPredicted RBP2.96□□□□□ -1.94
XRN1-209ENST00000472625 MREGQ8N565 214 aa2.96□□□□□ -1.94
XRN1-209ENST00000472625 TMEM86BQ8N661 226 aa2.96□□□□□ -1.94
XRN1-209ENST00000472625 C11orf65Q8NCR3 313 aa2.96□□□□□ -1.94
XRN1-209ENST00000472625 RBM15BQ8NDT2 890 aaKnown RBP2.96□□□□□ -1.94
XRN1-209ENST00000472625 NOXO1Q8NFA2 376 aa2.96□□□□□ -1.94
XRN1-209ENST00000472625 OR4F5Q8NH21 305 aa2.96□□□□□ -1.94
XRN1-209ENST00000472625 WIPF2Q8TF74 440 aaPredicted RBP2.96□□□□□ -1.94
XRN1-209ENST00000472625 CCL17Q92583 94 aa2.96□□□□□ -1.94
XRN1-209ENST00000472625 TAAR8Q969N4 342 aa2.96□□□□□ -1.94
XRN1-209ENST00000472625 KTI12Q96EK9 354 aaPredicted RBP2.96□□□□□ -1.94
XRN1-209ENST00000472625 DNAJA3Q96EY1 480 aa2.96□□□□□ -1.94
XRN1-209ENST00000472625 PLEKHA8Q96JA3 519 aa2.96□□□□□ -1.94
XRN1-209ENST00000472625 SNX22Q96L94 193 aa2.96□□□□□ -1.94
XRN1-209ENST00000472625 PPP1R36Q96LQ0 422 aa2.96□□□□□ -1.94
XRN1-209ENST00000472625 SLC30A2Q9BRI3 323 aa2.96□□□□□ -1.94
XRN1-209ENST00000472625 QTRT1Q9BXR0 403 aaKnown RBP2.96□□□□□ -1.94
XRN1-209ENST00000472625 MMP27Q9H306 513 aa2.96□□□□□ -1.94
XRN1-209ENST00000472625 TMEM38AQ9H6F2 299 aa2.96□□□□□ -1.94
XRN1-209ENST00000472625 SIAEQ9HAT2 523 aa2.96□□□□□ -1.94
XRN1-209ENST00000472625 CCNB1IP1Q9NPC3 277 aa2.96□□□□□ -1.94
XRN1-209ENST00000472625 TRIM36Q9NQ86 728 aa2.96□□□□□ -1.94
XRN1-209ENST00000472625 MAN2C1Q9NTJ4 1040 aa2.96□□□□□ -1.94
XRN1-209ENST00000472625 TMEM38BQ9NVV0 291 aa2.96□□□□□ -1.94
XRN1-209ENST00000472625 NKIRAS1Q9NYS0 192 aa2.96□□□□□ -1.94
XRN1-209ENST00000472625 TREM2Q9NZC2 230 aa2.96□□□□□ -1.94
XRN1-209ENST00000472625 PURGQ9UJV8 347 aaKnown RBP2.96□□□□□ -1.94
XRN1-209ENST00000472625 NOP16Q9Y3C1 178 aaKnown RBP2.96□□□□□ -1.94
XRN1-209ENST00000472625 WIPI2Q9Y4P8 454 aa2.96□□□□□ -1.94
XRN1-209ENST00000472625 MMP24Q9Y5R2 645 aa2.96□□□□□ -1.94
XRN1-209ENST00000472625 AUP1Q9Y679 476 aa2.96□□□□□ -1.94
XRN1-209ENST00000472625 GMEB1Q9Y692 573 aa2.96□□□□□ -1.94
XRN1-209ENST00000472625 PRKDCP78527 4128 aaKnown RBP2.96□□□□□ -1.94
XRN1-209ENST00000472625 LYNX1G3V0Z9 82 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 CLIC1O00299 241 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 PLPP3O14495 311 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 SDHDO14521 159 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 TIMM8AO60220 97 aaPredicted RBP2.95□□□□□ -1.94
XRN1-209ENST00000472625 ERLIN1O75477 346 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 SERPINI2O75830 405 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 SEC14L2O76054 403 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 TGDSO95455 350 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 FSTL3O95633 263 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 IFNA14P01570 189 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 BGLAPP02818 100 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 CRYBA1P05813 215 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 ALDOCP09972 364 aaKnown RBP2.95□□□□□ -1.94
XRN1-209ENST00000472625 NPSP0C0P6 89 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 PGA4P0DJD7 388 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 PGA3P0DJD8 388 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 LYNX1P0DP58 116 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 THRBP10828 461 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 PRG2P13727 222 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 IRF2P14316 349 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 NDUFB7P17568 137 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 EGR1P18146 543 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 TCN1P20061 433 aaPredicted RBP2.95□□□□□ -1.94
XRN1-209ENST00000472625 CCNOP22674 350 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms