RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 UNQ6126/PRO20091Q6UXV3 157 aa7.73□□□□□ -1.17
VCL-204ENST00000472585 C1orf174Q8IYL3 243 aa7.73□□□□□ -1.17
VCL-204ENST00000472585 ALDH16A1Q8IZ83 802 aa7.73□□□□□ -1.17
VCL-204ENST00000472585 TMEM239Q8WW34 195 aa7.73□□□□□ -1.17
VCL-204ENST00000472585 SSMEM1Q8WWF3 244 aa7.73□□□□□ -1.17
VCL-204ENST00000472585 PTP4A1Q93096 173 aa7.73□□□□□ -1.17
VCL-204ENST00000472585 THOC1Q96FV9 657 aaKnown RBP7.73□□□□□ -1.17
VCL-204ENST00000472585 MEGF10Q96KG7 1140 aa7.73□□□□□ -1.17
VCL-204ENST00000472585 TBX15Q96SF7 602 aa7.73□□□□□ -1.17
VCL-204ENST00000472585 CGREF1Q99674 301 aa7.73□□□□□ -1.17
VCL-204ENST00000472585 NUDT16L1Q9BRJ7 211 aaKnown RBP7.73□□□□□ -1.17
VCL-204ENST00000472585 KIF17Q9P2E2 1029 aa7.73□□□□□ -1.17
VCL-204ENST00000472585 HIF3AQ9Y2N7 669 aa7.73□□□□□ -1.17
VCL-204ENST00000472585 A0A1B0GWJ7 208 aa7.72□□□□□ -1.17
VCL-204ENST00000472585 A0A1W2PPL8 197 aa7.72□□□□□ -1.17
VCL-204ENST00000472585 F5H5P2 479 aa7.72□□□□□ -1.17
VCL-204ENST00000472585 TNFRSF13BO14836 293 aaPredicted RBP7.72□□□□□ -1.17
VCL-204ENST00000472585 ABHD16AO95870 558 aa7.72□□□□□ -1.17
VCL-204ENST00000472585 IGF2P01344 180 aa7.72□□□□□ -1.17
VCL-204ENST00000472585 IGHV4-59P01825 116 aa7.72□□□□□ -1.17
VCL-204ENST00000472585 OPN1MWP04001 364 aa7.72□□□□□ -1.17
VCL-204ENST00000472585 HLA-DPB1P04440 258 aa7.72□□□□□ -1.17
VCL-204ENST00000472585 OPN1MW2P0DN77 364 aa7.72□□□□□ -1.17
VCL-204ENST00000472585 OPN1MW3P0DN78 364 aa7.72□□□□□ -1.17
VCL-204ENST00000472585 COX5BP10606 129 aa7.72□□□□□ -1.17
VCL-204ENST00000472585 RPS2P15880 293 aaKnown RBP7.72□□□□□ -1.17
VCL-204ENST00000472585 RBM34P42696 430 aaKnown RBP7.72□□□□□ -1.17
VCL-204ENST00000472585 ARHGDIAP52565 204 aa7.72□□□□□ -1.17
VCL-204ENST00000472585 CTXN1P60606 82 aa7.72□□□□□ -1.17
VCL-204ENST00000472585 MAGOHP61326 146 aaKnown RBP7.72□□□□□ -1.17
VCL-204ENST00000472585 RPL27P61353 136 aaKnown RBP7.72□□□□□ -1.17
VCL-204ENST00000472585 GNB2P62879 340 aa7.72□□□□□ -1.17
VCL-204ENST00000472585 MAB21L1Q13394 359 aa7.72□□□□□ -1.17
VCL-204ENST00000472585 CCDC92Q53HC0 331 aaPredicted RBP7.72□□□□□ -1.17
VCL-204ENST00000472585 ALG10Q5BKT4 473 aa7.72□□□□□ -1.17
VCL-204ENST00000472585 ZMAT1Q5H9K5 638 aa7.72□□□□□ -1.17
VCL-204ENST00000472585 WDR25Q64LD2 544 aaPredicted RBP7.72□□□□□ -1.17
VCL-204ENST00000472585 C1orf94Q6P1W5 598 aa7.72□□□□□ -1.17
VCL-204ENST00000472585 CCDC80Q76M96 950 aa7.72□□□□□ -1.17
VCL-204ENST00000472585 MOGAT3Q86VF5 341 aa7.72□□□□□ -1.17
VCL-204ENST00000472585 MICU2Q8IYU8 434 aa7.72□□□□□ -1.17
VCL-204ENST00000472585 MUC20Q8N307 709 aaPredicted RBP7.72□□□□□ -1.17
VCL-204ENST00000472585 DPP10Q8N608 796 aa7.72□□□□□ -1.17
VCL-204ENST00000472585 ATG16L2Q8NAA4 619 aa7.72□□□□□ -1.17
VCL-204ENST00000472585 OR8G5Q8NG78 346 aa7.72□□□□□ -1.17
VCL-204ENST00000472585 OR10A6Q8NH74 314 aa7.72□□□□□ -1.17
VCL-204ENST00000472585 LRRC8CQ8TDW0 803 aa7.72□□□□□ -1.17
VCL-204ENST00000472585 TLCD1Q96CP7 247 aa7.72□□□□□ -1.17
VCL-204ENST00000472585 NEIL1Q96FI4 390 aaPredicted RBP7.72□□□□□ -1.17
VCL-204ENST00000472585 PLEKHA8Q96JA3 519 aa7.72□□□□□ -1.17
VCL-204ENST00000472585 RBP7Q96R05 134 aa7.72□□□□□ -1.17
VCL-204ENST00000472585 ALG12Q9BV10 488 aa7.72□□□□□ -1.17
VCL-204ENST00000472585 NECAP2Q9NVZ3 263 aa7.72□□□□□ -1.17
VCL-204ENST00000472585 CTSZQ9UBR2 303 aa7.72□□□□□ -1.17
VCL-204ENST00000472585 MIOXQ9UGB7 285 aa7.72□□□□□ -1.17
VCL-204ENST00000472585 CORO2BQ9UQ03 480 aa7.72□□□□□ -1.17
VCL-204ENST00000472585 SH3GLB1Q9Y371 365 aa7.72□□□□□ -1.17
VCL-204ENST00000472585 TRAV27A0A087WT01 109 aa7.71□□□□□ -1.18
VCL-204ENST00000472585 OR6C6A6NF89 314 aa7.71□□□□□ -1.18
VCL-204ENST00000472585 FBP2O00757 339 aa7.71□□□□□ -1.18
VCL-204ENST00000472585 GPR137BO60478 399 aa7.71□□□□□ -1.18
VCL-204ENST00000472585 FSTL3O95633 263 aa7.71□□□□□ -1.18
VCL-204ENST00000472585 RAC2P15153 192 aa7.71□□□□□ -1.18
VCL-204ENST00000472585 GSTM3P21266 225 aa7.71□□□□□ -1.18
VCL-204ENST00000472585 MSR1P21757 451 aa7.71□□□□□ -1.18
VCL-204ENST00000472585 ANOS1P23352 680 aa7.71□□□□□ -1.18
VCL-204ENST00000472585 TNFSF4P23510 183 aa7.71□□□□□ -1.18
VCL-204ENST00000472585 CFHR2P36980 270 aa7.71□□□□□ -1.18
VCL-204ENST00000472585 PSMB10P40306 273 aa7.71□□□□□ -1.18
VCL-204ENST00000472585 HTR5AP47898 357 aa7.71□□□□□ -1.18
VCL-204ENST00000472585 PITPNBP48739 271 aa7.71□□□□□ -1.18
VCL-204ENST00000472585 STX1BP61266 288 aa7.71□□□□□ -1.18
VCL-204ENST00000472585 PCBD1P61457 104 aa7.71□□□□□ -1.18
VCL-204ENST00000472585 TNP2Q05952 138 aa7.71□□□□□ -1.18
VCL-204ENST00000472585 CYP51A1Q16850 503 aa7.71□□□□□ -1.18
VCL-204ENST00000472585 CLEC12AQ5QGZ9 265 aa7.71□□□□□ -1.18
VCL-204ENST00000472585 Q6ZSV7 163 aa7.71□□□□□ -1.18
VCL-204ENST00000472585 ZER1Q7Z7L7 766 aa7.71□□□□□ -1.18
VCL-204ENST00000472585 DHDDSQ86SQ9 333 aa7.71□□□□□ -1.18
VCL-204ENST00000472585 SYT9Q86SS6 491 aa7.71□□□□□ -1.18
VCL-204ENST00000472585 PATL1Q86TB9 770 aaKnown RBP7.71□□□□□ -1.18
VCL-204ENST00000472585 SLC30A8Q8IWU4 369 aa7.71□□□□□ -1.18
VCL-204ENST00000472585 NPEPL1Q8NDH3 523 aa7.71□□□□□ -1.18
VCL-204ENST00000472585 OR51A7Q8NH64 312 aa7.71□□□□□ -1.18
VCL-204ENST00000472585 CCDC28BQ9BUN5 200 aa7.71□□□□□ -1.18
VCL-204ENST00000472585 WDR76Q9H967 626 aa7.71□□□□□ -1.18
VCL-204ENST00000472585 PTTG3PQ9NZH4 202 aa7.71□□□□□ -1.18
VCL-204ENST00000472585 NDRG4Q9ULP0 352 aaKnown RBP7.71□□□□□ -1.18
VCL-204ENST00000472585 A4GNTQ9UNA3 340 aa7.71□□□□□ -1.18
VCL-204ENST00000472585 SNX13Q9Y5W8 968 aa7.71□□□□□ -1.18
VCL-204ENST00000472585 A0A0U1RQK1 487 aa7.7□□□□□ -1.18
VCL-204ENST00000472585 RER1O15258 196 aa7.7□□□□□ -1.18
VCL-204ENST00000472585 SURF4O15260 269 aa7.7□□□□□ -1.18
VCL-204ENST00000472585 POLR3GO15318 223 aaPredicted RBP7.7□□□□□ -1.18
VCL-204ENST00000472585 SGCEO43556 437 aa7.7□□□□□ -1.18
VCL-204ENST00000472585 DOK2O60496 412 aa7.7□□□□□ -1.18
VCL-204ENST00000472585 OR5F1O95221 314 aa7.7□□□□□ -1.18
VCL-204ENST00000472585 CTLA4P16410 223 aa7.7□□□□□ -1.18
VCL-204ENST00000472585 TUBG1P23258 451 aa7.7□□□□□ -1.18
VCL-204ENST00000472585 CPT2P23786 658 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms