RNA–Protein interactions for RNA: ENST00000472397.5

SCAMP3-205, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 1,030 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-205ENST00000472397 CROCCP2Q86T23 111 aa8.41□□□□□ -1.06
SCAMP3-205ENST00000472397 OAFQ86UD1 273 aa8.41□□□□□ -1.06
SCAMP3-205ENST00000472397 C1orf174Q8IYL3 243 aa8.41□□□□□ -1.06
SCAMP3-205ENST00000472397 FITM2Q8N6M3 262 aa8.41□□□□□ -1.06
SCAMP3-205ENST00000472397 NPEPL1Q8NDH3 523 aa8.41□□□□□ -1.06
SCAMP3-205ENST00000472397 OR1F12Q8NHA8 337 aa8.41□□□□□ -1.06
SCAMP3-205ENST00000472397 LHX4Q969G2 390 aa8.41□□□□□ -1.06
SCAMP3-205ENST00000472397 UBE2FQ969M7 185 aa8.41□□□□□ -1.06
SCAMP3-205ENST00000472397 TSSK2Q96PF2 358 aa8.41□□□□□ -1.06
SCAMP3-205ENST00000472397 RBM4BQ9BQ04 359 aaKnown RBP8.41□□□□□ -1.06
SCAMP3-205ENST00000472397 ECSITQ9BQ95 431 aa8.41□□□□□ -1.06
SCAMP3-205ENST00000472397 ZMAT3Q9HA38 289 aaKnown RBP8.41□□□□□ -1.06
SCAMP3-205ENST00000472397 TBCCD1Q9NVR7 557 aa8.41□□□□□ -1.06
SCAMP3-205ENST00000472397 RPS6KA6Q9UK32 745 aa8.41□□□□□ -1.06
SCAMP3-205ENST00000472397 NDRG4Q9ULP0 352 aaKnown RBP8.41□□□□□ -1.06
SCAMP3-205ENST00000472397 A4GNTQ9UNA3 340 aa8.41□□□□□ -1.06
SCAMP3-205ENST00000472397 LRCH1Q9Y2L9 728 aa8.41□□□□□ -1.06
SCAMP3-205ENST00000472397 POLR3KQ9Y2Y1 108 aaPredicted RBP8.41□□□□□ -1.06
SCAMP3-205ENST00000472397 NOTCH1P46531 2555 aa8.41□□□□□ -1.06
SCAMP3-205ENST00000472397 WNK1Q9H4A3 2382 aa8.4□□□□□ -1.06
SCAMP3-205ENST00000472397 IGHV3OR15-7A0A075B7D8 119 aa8.4□□□□□ -1.06
SCAMP3-205ENST00000472397 A0A0G2JK05 382 aa8.4□□□□□ -1.06
SCAMP3-205ENST00000472397 A0A0G2JND7 137 aa8.4□□□□□ -1.06
SCAMP3-205ENST00000472397 TEX13CA0A0J9YWL9 993 aa8.4□□□□□ -1.06
SCAMP3-205ENST00000472397 KIR2DS1A0A191URI9 304 aa8.4□□□□□ -1.06
SCAMP3-205ENST00000472397 CLPSL1A2RUU4 121 aa8.4□□□□□ -1.06
SCAMP3-205ENST00000472397 CLDN34H7C241 214 aa8.4□□□□□ -1.06
SCAMP3-205ENST00000472397 CDC42EP2O14613 210 aa8.4□□□□□ -1.06
SCAMP3-205ENST00000472397 SURF4O15260 269 aa8.4□□□□□ -1.06
SCAMP3-205ENST00000472397 IGHV4-59P01825 116 aa8.4□□□□□ -1.06
SCAMP3-205ENST00000472397 TSPAN19P0C672 248 aa8.4□□□□□ -1.06
SCAMP3-205ENST00000472397 GUCY1A3Q02108 690 aa8.4□□□□□ -1.06
SCAMP3-205ENST00000472397 SCRN3Q0VDG4 424 aa8.4□□□□□ -1.06
SCAMP3-205ENST00000472397 TTMPQ5BVD1 217 aa8.4□□□□□ -1.06
SCAMP3-205ENST00000472397 GPR157Q5UAW9 335 aa8.4□□□□□ -1.06
SCAMP3-205ENST00000472397 WDR25Q64LD2 544 aaPredicted RBP8.4□□□□□ -1.06
SCAMP3-205ENST00000472397 ASPHD2Q6ICH7 369 aa8.4□□□□□ -1.06
SCAMP3-205ENST00000472397 Q6YL49 198 aa8.4□□□□□ -1.06
SCAMP3-205ENST00000472397 CALHM3Q86XJ0 350 aa8.4□□□□□ -1.06
SCAMP3-205ENST00000472397 LINC00346Q8IVM7 164 aa8.4□□□□□ -1.06
SCAMP3-205ENST00000472397 MUC20Q8N307 709 aaPredicted RBP8.4□□□□□ -1.06
SCAMP3-205ENST00000472397 LNX2Q8N448 690 aa8.4□□□□□ -1.06
SCAMP3-205ENST00000472397 DPP10Q8N608 796 aa8.4□□□□□ -1.06
SCAMP3-205ENST00000472397 OR8G5Q8NG78 346 aa8.4□□□□□ -1.06
SCAMP3-205ENST00000472397 OR4F5Q8NH21 305 aa8.4□□□□□ -1.06
SCAMP3-205ENST00000472397 C10orf82Q8WW14 230 aa8.4□□□□□ -1.06
SCAMP3-205ENST00000472397 ZNF583Q96ND8 569 aa8.4□□□□□ -1.06
SCAMP3-205ENST00000472397 TBX15Q96SF7 602 aa8.4□□□□□ -1.06
SCAMP3-205ENST00000472397 STX18Q9P2W9 335 aaKnown RBP8.4□□□□□ -1.06
SCAMP3-205ENST00000472397 GRHPRQ9UBQ7 328 aa8.4□□□□□ -1.06
SCAMP3-205ENST00000472397 CTSZQ9UBR2 303 aa8.4□□□□□ -1.06
SCAMP3-205ENST00000472397 CLN8Q9UBY8 286 aa8.4□□□□□ -1.06
SCAMP3-205ENST00000472397 CGGBP1Q9UFW8 167 aaPredicted RBP8.4□□□□□ -1.06
SCAMP3-205ENST00000472397 BAG5Q9UL15 447 aa8.4□□□□□ -1.06
SCAMP3-205ENST00000472397 POLR1DQ9Y2S0 133 aa8.4□□□□□ -1.06
SCAMP3-205ENST00000472397 RNF114Q9Y508 228 aa8.4□□□□□ -1.06
SCAMP3-205ENST00000472397 N6AMT1Q9Y5N5 214 aa8.4□□□□□ -1.06
SCAMP3-205ENST00000472397 A0A0U1RQK1 487 aa8.39□□□□□ -1.07
SCAMP3-205ENST00000472397 LOC100653049A0A140TA62 436 aa8.39□□□□□ -1.07
SCAMP3-205ENST00000472397 C5orf63A6NC05 138 aa8.39□□□□□ -1.07
SCAMP3-205ENST00000472397 A6NIZ1 184 aa8.39□□□□□ -1.07
SCAMP3-205ENST00000472397 H3BSA7 217 aa8.39□□□□□ -1.07
SCAMP3-205ENST00000472397 FFAR1O14842 300 aa8.39□□□□□ -1.07
SCAMP3-205ENST00000472397 FAM20BO75063 409 aa8.39□□□□□ -1.07
SCAMP3-205ENST00000472397 KRT34O76011 436 aa8.39□□□□□ -1.07
SCAMP3-205ENST00000472397 ZNF682O95780 498 aa8.39□□□□□ -1.07
SCAMP3-205ENST00000472397 ANOS1P23352 680 aa8.39□□□□□ -1.07
SCAMP3-205ENST00000472397 FPR3P25089 353 aa8.39□□□□□ -1.07
SCAMP3-205ENST00000472397 SRP9P49458 86 aaKnown RBP8.39□□□□□ -1.07
SCAMP3-205ENST00000472397 RAP1BP61224 184 aa8.39□□□□□ -1.07
SCAMP3-205ENST00000472397 ARF6P62330 175 aa8.39□□□□□ -1.07
SCAMP3-205ENST00000472397 RAP1AP62834 184 aa8.39□□□□□ -1.07
SCAMP3-205ENST00000472397 ST3GAL3Q11203 375 aa8.39□□□□□ -1.07
SCAMP3-205ENST00000472397 CYLC2Q14093 348 aaPredicted RBP8.39□□□□□ -1.07
SCAMP3-205ENST00000472397 ZNF404Q494X3 552 aa8.39□□□□□ -1.07
SCAMP3-205ENST00000472397 BEND6Q5SZJ8 279 aaPredicted RBP8.39□□□□□ -1.07
SCAMP3-205ENST00000472397 ZNF730Q6ZMV8 503 aa8.39□□□□□ -1.07
SCAMP3-205ENST00000472397 ZNF841Q6ZN19 808 aa8.39□□□□□ -1.07
SCAMP3-205ENST00000472397 C9orf139Q6ZV77 190 aa8.39□□□□□ -1.07
SCAMP3-205ENST00000472397 C11orf44Q8N8P7 122 aa8.39□□□□□ -1.07
SCAMP3-205ENST00000472397 OR13G1Q8NGZ3 307 aa8.39□□□□□ -1.07
SCAMP3-205ENST00000472397 LIPHQ8WWY8 451 aa8.39□□□□□ -1.07
SCAMP3-205ENST00000472397 DACT3Q96B18 629 aaPredicted RBP8.39□□□□□ -1.07
SCAMP3-205ENST00000472397 SLCO4A1Q96BD0 722 aa8.39□□□□□ -1.07
SCAMP3-205ENST00000472397 FAM46AQ96IP4 442 aaKnown RBP8.39□□□□□ -1.07
SCAMP3-205ENST00000472397 PLEKHA8Q96JA3 519 aa8.39□□□□□ -1.07
SCAMP3-205ENST00000472397 ZNF582Q96NG8 517 aaPredicted RBP8.39□□□□□ -1.07
SCAMP3-205ENST00000472397 ZNF570Q96NI8 536 aa8.39□□□□□ -1.07
SCAMP3-205ENST00000472397 CITED1Q99966 193 aa8.39□□□□□ -1.07
SCAMP3-205ENST00000472397 FNDC11Q9BVV2 318 aa8.39□□□□□ -1.07
SCAMP3-205ENST00000472397 SYT4Q9H2B2 425 aa8.39□□□□□ -1.07
SCAMP3-205ENST00000472397 FN3KQ9H479 309 aa8.39□□□□□ -1.07
SCAMP3-205ENST00000472397 RABEP2Q9H5N1 569 aa8.39□□□□□ -1.07
SCAMP3-205ENST00000472397 SRA1Q9HD15 236 aaKnown RBP8.39□□□□□ -1.07
SCAMP3-205ENST00000472397 TMEM100Q9NV29 134 aa8.39□□□□□ -1.07
SCAMP3-205ENST00000472397 MIOXQ9UGB7 285 aa8.39□□□□□ -1.07
SCAMP3-205ENST00000472397 IER3IP1Q9Y5U9 82 aa8.39□□□□□ -1.07
SCAMP3-205ENST00000472397 A0A087WUU8 490 aa8.38□□□□□ -1.07
SCAMP3-205ENST00000472397 CENPVL3A0A0U1RRI6 287 aa8.38□□□□□ -1.07
SCAMP3-205ENST00000472397 A0A1B0GW55 424 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms