RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-209ENST00000472044 C11orf72Q8NBR9 251 aa2.21□□□□□ -2.06
PTCD3-209ENST00000472044 CHST4Q8NCG5 386 aa2.21□□□□□ -2.06
PTCD3-209ENST00000472044 CCDC148Q8NFR7 591 aa2.21□□□□□ -2.06
PTCD3-209ENST00000472044 OR10AD1Q8NGE0 317 aa2.21□□□□□ -2.06
PTCD3-209ENST00000472044 OR52E2Q8NGJ4 325 aa2.21□□□□□ -2.06
PTCD3-209ENST00000472044 OR9G4Q8NGQ1 327 aa2.21□□□□□ -2.06
PTCD3-209ENST00000472044 COQ8AQ8NI60 647 aa2.21□□□□□ -2.06
PTCD3-209ENST00000472044 ECHDC3Q96DC8 303 aa2.21□□□□□ -2.06
PTCD3-209ENST00000472044 NARS2Q96I59 477 aaKnown RBP2.21□□□□□ -2.06
PTCD3-209ENST00000472044 TIMM17AQ99595 171 aa2.21□□□□□ -2.06
PTCD3-209ENST00000472044 MTG1Q9BT17 334 aaPredicted RBP2.21□□□□□ -2.06
PTCD3-209ENST00000472044 ACTR3CQ9C0K3 210 aaPredicted RBP2.21□□□□□ -2.06
PTCD3-209ENST00000472044 SPNS1Q9H2V7 528 aa2.21□□□□□ -2.06
PTCD3-209ENST00000472044 MRPS30Q9NP92 439 aaKnown RBP2.21□□□□□ -2.06
PTCD3-209ENST00000472044 NCBP2LA6PVI3 153 aaKnown RBP2.2□□□□□ -2.06
PTCD3-209ENST00000472044 WRBO00258 174 aa2.2□□□□□ -2.06
PTCD3-209ENST00000472044 RAD51BO15315 384 aa2.2□□□□□ -2.06
PTCD3-209ENST00000472044 SOCS1O15524 211 aa2.2□□□□□ -2.06
PTCD3-209ENST00000472044 RBFOX2O43251 390 aaKnown RBP eCLIP2.2□□□□□ -2.06
PTCD3-209ENST00000472044 VAMP5O95183 116 aa2.2□□□□□ -2.06
PTCD3-209ENST00000472044 ERGP11308 486 aa2.2□□□□□ -2.06
PTCD3-209ENST00000472044 CTRB1P17538 263 aa2.2□□□□□ -2.06
PTCD3-209ENST00000472044 HMOX2P30519 316 aa2.2□□□□□ -2.06
PTCD3-209ENST00000472044 TNFSF9P41273 254 aa2.2□□□□□ -2.06
PTCD3-209ENST00000472044 SYNJ2BPP57105 145 aa2.2□□□□□ -2.06
PTCD3-209ENST00000472044 KRTAP10-8P60410 259 aa2.2□□□□□ -2.06
PTCD3-209ENST00000472044 PPP1CBP62140 327 aa2.2□□□□□ -2.06
PTCD3-209ENST00000472044 GBE1Q04446 702 aa2.2□□□□□ -2.06
PTCD3-209ENST00000472044 MOBPQ13875 183 aa2.2□□□□□ -2.06
PTCD3-209ENST00000472044 ZNF684Q5T5D7 378 aa2.2□□□□□ -2.06
PTCD3-209ENST00000472044 C1orf185Q5T7R7 199 aa2.2□□□□□ -2.06
PTCD3-209ENST00000472044 LCE3AQ5TA76 89 aa2.2□□□□□ -2.06
PTCD3-209ENST00000472044 TMEM53Q6P2H8 277 aa2.2□□□□□ -2.06
PTCD3-209ENST00000472044 PRMT9Q6P2P2 845 aa2.2□□□□□ -2.06
PTCD3-209ENST00000472044 EIF3MQ7L2H7 374 aaKnown RBP2.2□□□□□ -2.06
PTCD3-209ENST00000472044 CBLN2Q8IUK8 224 aa2.2□□□□□ -2.06
PTCD3-209ENST00000472044 OR52K2Q8NGK3 314 aa2.2□□□□□ -2.06
PTCD3-209ENST00000472044 OR8U1Q8NH10 309 aa2.2□□□□□ -2.06
PTCD3-209ENST00000472044 DCPSQ96C86 337 aaKnown RBP2.2□□□□□ -2.06
PTCD3-209ENST00000472044 ZNF382Q96SR6 550 aa2.2□□□□□ -2.06
PTCD3-209ENST00000472044 BPIFA3Q9BQP9 254 aa2.2□□□□□ -2.06
PTCD3-209ENST00000472044 RETNQ9HD89 108 aa2.2□□□□□ -2.06
PTCD3-209ENST00000472044 TRMT112Q9UI30 125 aaKnown RBP2.2□□□□□ -2.06
PTCD3-209ENST00000472044 PALLDQ8WX93 1383 aa2.2□□□□□ -2.06
PTCD3-209ENST00000472044 TNS2Q63HR2 1409 aa2.19□□□□□ -2.06
PTCD3-209ENST00000472044 IGHV1OR15-9A0A0B4J2B8 117 aa2.19□□□□□ -2.06
PTCD3-209ENST00000472044 A0A1B0GW55 424 aa2.19□□□□□ -2.06
PTCD3-209ENST00000472044 SERTM2A0A1B0GWG4 89 aa2.19□□□□□ -2.06
PTCD3-209ENST00000472044 DNASE2O00115 360 aaPredicted RBP2.19□□□□□ -2.06
PTCD3-209ENST00000472044 CASQ2O14958 399 aaPredicted RBP2.19□□□□□ -2.06
PTCD3-209ENST00000472044 SEMA3DO95025 777 aa2.19□□□□□ -2.06
PTCD3-209ENST00000472044 CCNB2O95067 398 aa2.19□□□□□ -2.06
PTCD3-209ENST00000472044 LSM8O95777 96 aaKnown RBP2.19□□□□□ -2.06
PTCD3-209ENST00000472044 HBE1P02100 147 aa2.19□□□□□ -2.06
PTCD3-209ENST00000472044 APCSP02743 223 aa2.19□□□□□ -2.06
PTCD3-209ENST00000472044 EIF4EP06730 217 aaKnown RBP2.19□□□□□ -2.06
PTCD3-209ENST00000472044 ADRA2AP08913 450 aa2.19□□□□□ -2.06
PTCD3-209ENST00000472044 DUX4L2P0CJ85 424 aa2.19□□□□□ -2.06
PTCD3-209ENST00000472044 DUX4L3P0CJ86 424 aa2.19□□□□□ -2.06
PTCD3-209ENST00000472044 DUX4L5P0CJ88 424 aa2.19□□□□□ -2.06
PTCD3-209ENST00000472044 DUX4L6P0CJ89 424 aa2.19□□□□□ -2.06
PTCD3-209ENST00000472044 DUX4L7P0CJ90 424 aa2.19□□□□□ -2.06
PTCD3-209ENST00000472044 ZNF121P58317 390 aaPredicted RBP2.19□□□□□ -2.06
PTCD3-209ENST00000472044 NCF4Q15080 339 aa2.19□□□□□ -2.06
PTCD3-209ENST00000472044 TPTE2P1Q5T6R2 138 aa2.19□□□□□ -2.06
PTCD3-209ENST00000472044 TWF2Q6IBS0 349 aaKnown RBP2.19□□□□□ -2.06
PTCD3-209ENST00000472044 CALHM1Q8IU99 346 aa2.19□□□□□ -2.06
PTCD3-209ENST00000472044 CDKL3Q8IVW4 592 aaPredicted RBP2.19□□□□□ -2.06
PTCD3-209ENST00000472044 COX18Q8N8Q8 333 aa2.19□□□□□ -2.06
PTCD3-209ENST00000472044 APH1BQ8WW43 257 aa2.19□□□□□ -2.06
PTCD3-209ENST00000472044 DEDD2Q8WXF8 326 aa2.19□□□□□ -2.06
PTCD3-209ENST00000472044 RGP1Q92546 391 aaPredicted RBP2.19□□□□□ -2.06
PTCD3-209ENST00000472044 PTX4Q96A99 478 aa2.19□□□□□ -2.06
PTCD3-209ENST00000472044 PRRC1Q96M27 445 aa2.19□□□□□ -2.06
PTCD3-209ENST00000472044 UCK2Q9BZX2 261 aa2.19□□□□□ -2.06
PTCD3-209ENST00000472044 ELOVL6Q9H5J4 265 aa2.19□□□□□ -2.06
PTCD3-209ENST00000472044 TMEM38AQ9H6F2 299 aa2.19□□□□□ -2.06
PTCD3-209ENST00000472044 SIRT7Q9NRC8 400 aa2.19□□□□□ -2.06
PTCD3-209ENST00000472044 CLN6Q9NWW5 311 aa2.19□□□□□ -2.06
PTCD3-209ENST00000472044 PTTG3PQ9NZH4 202 aa2.19□□□□□ -2.06
PTCD3-209ENST00000472044 DUX4Q9UBX2 424 aa2.19□□□□□ -2.06
PTCD3-209ENST00000472044 HYOU1Q9Y4L1 999 aa2.19□□□□□ -2.06
PTCD3-209ENST00000472044 SAR1BQ9Y6B6 198 aa2.19□□□□□ -2.06
PTCD3-209ENST00000472044 TSPOAP1O95153 1857 aa2.19□□□□□ -2.06
PTCD3-209ENST00000472044 PLA2R1Q13018 1463 aa2.19□□□□□ -2.06
PTCD3-209ENST00000472044 BRWD3Q6RI45 1802 aa2.19□□□□□ -2.06
PTCD3-209ENST00000472044 SCN1AP35498 2009 aa2.18□□□□□ -2.06
PTCD3-209ENST00000472044 ANKRD12Q6UB98 2062 aa2.18□□□□□ -2.06
PTCD3-209ENST00000472044 H7C417 338 aa2.18□□□□□ -2.06
PTCD3-209ENST00000472044 HPRT1P00492 218 aa2.18□□□□□ -2.06
PTCD3-209ENST00000472044 HLA-DQA1P01909 254 aa2.18□□□□□ -2.06
PTCD3-209ENST00000472044 FGF4P08620 206 aa2.18□□□□□ -2.06
PTCD3-209ENST00000472044 OR56A5P0C7T3 313 aa2.18□□□□□ -2.06
PTCD3-209ENST00000472044 LINC00869P0C866 280 aa2.18□□□□□ -2.06
PTCD3-209ENST00000472044 SFTPCP11686 197 aa2.18□□□□□ -2.06
PTCD3-209ENST00000472044 GSTM3P21266 225 aa2.18□□□□□ -2.06
PTCD3-209ENST00000472044 ITIH4Q14624 930 aa2.18□□□□□ -2.06
PTCD3-209ENST00000472044 SMUG1Q53HV7 270 aa2.18□□□□□ -2.06
PTCD3-209ENST00000472044 BEX5Q5H9J7 111 aa2.18□□□□□ -2.06
PTCD3-209ENST00000472044 TCEAL5Q5H9L2 206 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms