RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 KLHL36Q8N4N3 616 aa19.01■□□□□ 0.63
C9orf3-213ENST00000471978 SPICQ8N5J4 248 aa19.01■□□□□ 0.63
C9orf3-213ENST00000471978 GJC3Q8NFK1 279 aa19.01■□□□□ 0.63
C9orf3-213ENST00000471978 OR5L1Q8NGL2 311 aa19.01■□□□□ 0.63
C9orf3-213ENST00000471978 FANK1Q8TC84 345 aa19.01■□□□□ 0.63
C9orf3-213ENST00000471978 OR2V2Q96R30 315 aa19.01■□□□□ 0.63
C9orf3-213ENST00000471978 PTTG3PQ9NZH4 202 aa19.01■□□□□ 0.63
C9orf3-213ENST00000471978 OPN4Q9UHM6 478 aa19.01■□□□□ 0.63
C9orf3-213ENST00000471978 PPP1R3CQ9UQK1 317 aa19.01■□□□□ 0.63
C9orf3-213ENST00000471978 DCTN6O00399 190 aa19■□□□□ 0.63
C9orf3-213ENST00000471978 GADD45GO95257 159 aa19■□□□□ 0.63
C9orf3-213ENST00000471978 ACTG1P63261 375 aa19■□□□□ 0.63
C9orf3-213ENST00000471978 SPIBQ01892 262 aa19■□□□□ 0.63
C9orf3-213ENST00000471978 RFX4Q33E94 735 aa19■□□□□ 0.63
C9orf3-213ENST00000471978 LEG1Q6P5S2 330 aa19■□□□□ 0.63
C9orf3-213ENST00000471978 PGM2L1Q6PCE3 622 aa19■□□□□ 0.63
C9orf3-213ENST00000471978 JAZF1Q86VZ6 243 aa19■□□□□ 0.63
C9orf3-213ENST00000471978 LRRC28Q86X40 367 aaPredicted RBP19■□□□□ 0.63
C9orf3-213ENST00000471978 ATG16L2Q8NAA4 619 aa19■□□□□ 0.63
C9orf3-213ENST00000471978 JMJD8Q96S16 334 aa19■□□□□ 0.63
C9orf3-213ENST00000471978 SLC6A7Q99884 636 aa19■□□□□ 0.63
C9orf3-213ENST00000471978 SUCNR1Q9BXA5 334 aa19■□□□□ 0.63
C9orf3-213ENST00000471978 SRA1Q9HD15 236 aaKnown RBP19■□□□□ 0.63
C9orf3-213ENST00000471978 LHFPL6Q9Y693 200 aa19■□□□□ 0.63
C9orf3-213ENST00000471978 ARHGAP32A7KAX9 2087 aa19■□□□□ 0.63
C9orf3-213ENST00000471978 PPIAL4EA0A075B759 164 aa18.99■□□□□ 0.63
C9orf3-213ENST00000471978 IGLV1-36A0A0B4J1U3 117 aa18.99■□□□□ 0.63
C9orf3-213ENST00000471978 PPIAL4CA0A0B4J2A2 164 aa18.99■□□□□ 0.63
C9orf3-213ENST00000471978 PPIAL4DF5H284 164 aa18.99■□□□□ 0.63
C9orf3-213ENST00000471978 TRIM77I1YAP6 450 aa18.99■□□□□ 0.63
C9orf3-213ENST00000471978 SEMG1P04279 462 aa18.99■□□□□ 0.63
C9orf3-213ENST00000471978 PPIAL4FP0DN26 164 aa18.99■□□□□ 0.63
C9orf3-213ENST00000471978 SLC6A6P31641 620 aa18.99■□□□□ 0.63
C9orf3-213ENST00000471978 BTG1P62324 171 aa18.99■□□□□ 0.63
C9orf3-213ENST00000471978 HIST1H3AP68431 136 aa18.99■□□□□ 0.63
C9orf3-213ENST00000471978 ZMYND11Q15326 602 aa18.99■□□□□ 0.63
C9orf3-213ENST00000471978 TMEM155Q4W5P6 130 aa18.99■□□□□ 0.63
C9orf3-213ENST00000471978 HIST2H3PS2Q5TEC6 136 aa18.99■□□□□ 0.63
C9orf3-213ENST00000471978 OR2T2Q6IF00 324 aa18.99■□□□□ 0.63
C9orf3-213ENST00000471978 CORO6Q6QEF8 472 aa18.99■□□□□ 0.63
C9orf3-213ENST00000471978 FBXW12Q6X9E4 464 aa18.99■□□□□ 0.63
C9orf3-213ENST00000471978 HIST2H3AQ71DI3 136 aa18.99■□□□□ 0.63
C9orf3-213ENST00000471978 OR6V1Q8N148 313 aa18.99■□□□□ 0.63
C9orf3-213ENST00000471978 BPIFB2Q8N4F0 458 aa18.99■□□□□ 0.63
C9orf3-213ENST00000471978 FAM216AQ8WUB2 273 aa18.99■□□□□ 0.63
C9orf3-213ENST00000471978 APOBEC3DQ96AK3 386 aaPredicted RBP18.99■□□□□ 0.63
C9orf3-213ENST00000471978 SIGLEC11Q96RL6 698 aa18.99■□□□□ 0.63
C9orf3-213ENST00000471978 NMNAT3Q96T66 252 aa18.99■□□□□ 0.63
C9orf3-213ENST00000471978 COQ7Q99807 217 aa18.99■□□□□ 0.63
C9orf3-213ENST00000471978 HDHD2Q9H0R4 259 aa18.99■□□□□ 0.63
C9orf3-213ENST00000471978 OR52D1Q9H346 318 aa18.99■□□□□ 0.63
C9orf3-213ENST00000471978 PATZ1Q9HBE1 687 aaKnown RBP18.99■□□□□ 0.63
C9orf3-213ENST00000471978 MAGEL2Q9UJ55 1249 aa18.99■□□□□ 0.63
C9orf3-213ENST00000471978 B9D1Q9UPM9 204 aa18.99■□□□□ 0.63
C9orf3-213ENST00000471978 SNX3O60493 162 aa18.98■□□□□ 0.63
C9orf3-213ENST00000471978 RENP00797 406 aa18.98■□□□□ 0.63
C9orf3-213ENST00000471978 HSD17B1P14061 328 aa18.98■□□□□ 0.63
C9orf3-213ENST00000471978 MSX2P35548 267 aaPredicted RBP18.98■□□□□ 0.63
C9orf3-213ENST00000471978 MCUR1Q96AQ8 359 aa18.98■□□□□ 0.63
C9orf3-213ENST00000471978 IFT27Q9BW83 186 aa18.98■□□□□ 0.63
C9orf3-213ENST00000471978 NSRP1Q9H0G5 558 aaKnown RBP18.98■□□□□ 0.63
C9orf3-213ENST00000471978 GCM1Q9NP62 436 aa18.98■□□□□ 0.63
C9orf3-213ENST00000471978 MMP26Q9NRE1 261 aa18.98■□□□□ 0.63
C9orf3-213ENST00000471978 ARPC3O15145 178 aa18.97■□□□□ 0.63
C9orf3-213ENST00000471978 OR10H3O60404 316 aa18.97■□□□□ 0.63
C9orf3-213ENST00000471978 FSHBP01225 129 aa18.97■□□□□ 0.63
C9orf3-213ENST00000471978 HIST1H1CP16403 213 aaKnown RBP18.97■□□□□ 0.63
C9orf3-213ENST00000471978 FPR3P25089 353 aa18.97■□□□□ 0.63
C9orf3-213ENST00000471978 CFPP27918 469 aa18.97■□□□□ 0.63
C9orf3-213ENST00000471978 DBPQ10586 325 aaPredicted RBP18.97■□□□□ 0.63
C9orf3-213ENST00000471978 COX10Q12887 443 aa18.97■□□□□ 0.63
C9orf3-213ENST00000471978 SLC27A4Q6P1M0 643 aa18.97■□□□□ 0.63
C9orf3-213ENST00000471978 CPLX4Q7Z7G2 160 aa18.97■□□□□ 0.63
C9orf3-213ENST00000471978 OR8G5Q8NG78 346 aa18.97■□□□□ 0.63
C9orf3-213ENST00000471978 OR10AD1Q8NGE0 317 aa18.97■□□□□ 0.63
C9orf3-213ENST00000471978 OR13G1Q8NGZ3 307 aa18.97■□□□□ 0.63
C9orf3-213ENST00000471978 OR4K13Q8NH42 304 aa18.97■□□□□ 0.63
C9orf3-213ENST00000471978 NSMCE2Q96MF7 247 aa18.97■□□□□ 0.63
C9orf3-213ENST00000471978 ZNF582Q96NG8 517 aaPredicted RBP18.97■□□□□ 0.63
C9orf3-213ENST00000471978 RBM4Q9BWF3 364 aaKnown RBP18.97■□□□□ 0.63
C9orf3-213ENST00000471978 RPRD1BQ9NQG5 326 aaKnown RBP18.97■□□□□ 0.63
C9orf3-213ENST00000471978 TMEM178BH3BS89 294 aa18.96■□□□□ 0.63
C9orf3-213ENST00000471978 FABP3P05413 133 aa18.96■□□□□ 0.63
C9orf3-213ENST00000471978 FPR2P25090 351 aa18.96■□□□□ 0.63
C9orf3-213ENST00000471978 NOS3P29474 1203 aa18.96■□□□□ 0.63
C9orf3-213ENST00000471978 IFNGR2P38484 337 aa18.96■□□□□ 0.63
C9orf3-213ENST00000471978 MDH2P40926 338 aaKnown RBP18.96■□□□□ 0.63
C9orf3-213ENST00000471978 SLC6A9P48067 706 aa18.96■□□□□ 0.63
C9orf3-213ENST00000471978 MMP16P51512 607 aa18.96■□□□□ 0.63
C9orf3-213ENST00000471978 SEC61A1P61619 476 aaKnown RBP18.96■□□□□ 0.63
C9orf3-213ENST00000471978 SAMD4BQ5PRF9 694 aaKnown RBP18.96■□□□□ 0.63
C9orf3-213ENST00000471978 DEFB108BQ8NET1 73 aa18.96■□□□□ 0.63
C9orf3-213ENST00000471978 SLC26A10Q8NG04 563 aa18.96■□□□□ 0.63
C9orf3-213ENST00000471978 C22orf15Q8WYQ4 148 aa18.96■□□□□ 0.63
C9orf3-213ENST00000471978 GCDHQ92947 438 aaPredicted RBP18.96■□□□□ 0.63
C9orf3-213ENST00000471978 CD300AQ9UGN4 299 aa18.96■□□□□ 0.63
C9orf3-213ENST00000471978 TMCC3Q9ULS5 477 aa18.96■□□□□ 0.63
C9orf3-213ENST00000471978 POLR3KQ9Y2Y1 108 aaPredicted RBP18.96■□□□□ 0.63
C9orf3-213ENST00000471978 TRAPPC2LH3BP13 241 aa18.95■□□□□ 0.62
C9orf3-213ENST00000471978 IFNL4K9M1U5 179 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms