RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 LMO3Q8TAP4 145 aa12.12□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 FAM174AQ8TBP5 190 aa12.12□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 ZNF142P52746 1687 aaPredicted RBP12.12□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 QDPRP09417 244 aa12.12□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 C7P10643 843 aa12.12□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 ID4P47928 161 aa12.12□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 HAGHQ16775 308 aa12.12□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 NAXDQ8IW45 347 aa12.12□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 SLC24A4Q8NFF2 622 aa12.12□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 OR13C8Q8NGS7 320 aa12.12□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 ADAMTS14Q8WXS8 1223 aa12.12□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 GPR78Q96P69 363 aa12.12□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 OR51B4Q9Y5P0 310 aa12.12□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 COL14A1Q05707 1796 aaKnown RBP12.12□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 CCSO14618 274 aa12.12□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 TBXA2RP21731 343 aa12.12□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 GIPRP48546 466 aa12.12□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 GAMTQ14353 236 aa12.12□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 GPR32P1Q8NGA4 272 aa12.12□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 USP22Q9UPT9 525 aa12.12□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 COL2A1P02458 1487 aaPredicted RBP12.12□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 A0A1B0GWA3 101 aa12.12□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 CCR6P51684 374 aa12.12□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 RPS27AP62979 156 aaKnown RBP12.12□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 UBA52P62987 128 aaKnown RBP12.12□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 YOD1Q5VVQ6 348 aaPredicted RBP12.12□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 PRR7Q8TB68 274 aa12.12□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 BIRC8Q96P09 236 aa12.12□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 RTL8AQ9BWD3 113 aa12.12□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 AAMDCQ9H7C9 122 aa12.12□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 FITM1A5D6W6 292 aa12.11□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 ATP6V1G2-DDX39BF2Z307 99 aa12.11□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 ATXN1LP0C7T5 689 aaKnown RBP12.11□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 B3GNT8Q7Z7M8 397 aa12.11□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 ETFBKMTQ8IXQ9 262 aa12.11□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 Q96M85 177 aa12.11□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 MS4A18H0YCH9 400 aa12.11□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 CTDSP2O14595 271 aa12.11□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 SIX6O95475 246 aa12.11□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 IAPPP10997 89 aa12.11□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 RAB5AP20339 215 aa12.11□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 BCL6P41182 706 aa12.11□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 MS4A18Q3C1V0 323 aa12.11□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 ACTBL2Q562R1 376 aa12.11□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 RPL22L1Q6P5R6 122 aaKnown RBP12.11□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 OR52H1Q8NGJ2 320 aa12.11□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 OR2G3Q8NGZ4 309 aa12.11□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 OR4C12Q96R67 309 aa12.11□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 GLIPR2Q9H4G4 154 aa12.11□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 KIF13AQ9H1H9 1805 aa12.11□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 LRRTM1Q86UE6 522 aa12.11□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 VRK3Q8IV63 474 aa12.11□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 SLA2Q9H6Q3 261 aa12.11□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 FBXL17Q9UF56 701 aa12.11□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 OR2T7P0C7T2 308 aa12.11□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 TGFBR1P36897 503 aa12.11□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 PIGAP37287 484 aa12.11□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 MAP2K6P52564 334 aa12.11□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 MAML2Q8IZL2 1156 aaPredicted RBP12.11□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 CBARPQ8N350 705 aaPredicted RBP12.11□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 COMMD5Q9GZQ3 224 aa12.11□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 GDNFP39905 211 aa12.11□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 RPS25P62851 125 aaKnown RBP12.11□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 BCL7AQ4VC05 210 aa12.11□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 KCTD11Q693B1 232 aa12.11□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 TDHQ8IZJ6 230 aa12.11□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 SIGLECL1Q8N7X8 197 aa12.11□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 BTF3L4Q96K17 158 aa12.11□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 C6orf106Q9H6K1 298 aaPredicted RBP12.11□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 HINT3Q9NQE9 182 aaKnown RBP12.11□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 SIRT5Q9NXA8 310 aa12.11□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 IL37Q9NZH6 218 aa12.11□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 IMPA1P29218 277 aa12.11□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 TRA2BP62995 288 aaKnown RBP12.11□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 PRDX4Q13162 271 aa12.11□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 OXA1LQ15070 435 aa12.11□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 ZMAT1Q5H9K5 638 aa12.11□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 FBXL14Q8N1E6 418 aa12.11□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 ACY3Q96HD9 319 aa12.11□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 ESRP2Q9H6T0 727 aaKnown RBP12.11□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 MOB4Q9Y3A3 225 aa12.11□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 SOCS7O14512 581 aa12.1□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 ABCD3P28288 659 aa12.1□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 EMX1Q04741 257 aaPredicted RBP12.1□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 Q56UQ5 140 aa12.1□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 TSEN54Q7Z6J9 526 aaKnown RBP12.1□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 MRPL10Q7Z7H8 261 aaKnown RBP12.1□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 GABRG1Q8N1C3 465 aa12.1□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 PARP16Q8N5Y8 322 aa12.1□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 OR2AK2Q8NG84 335 aa12.1□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 OR10R2Q8NGX6 335 aa12.1□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 MAFAQ8NHW3 353 aaPredicted RBP12.1□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 CMBLQ96DG6 245 aa12.1□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 GPX3P22352 226 aa12.1□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 TMEM182Q6ZP80 229 aaPredicted RBP12.1□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 HIST2H3AQ71DI3 136 aa12.1□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 OR4F5Q8NH21 305 aa12.1□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 SGK494Q96LW2 274 aa12.1□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 OR4F4Q96R69 305 aa12.1□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 SEMA4GQ9NTN9 838 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms