RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 TMEM129A0AVI4 362 aa4□□□□□ -1.77
CCDC39-202ENST00000471307 GABRR3A8MPY1 467 aa4□□□□□ -1.77
CCDC39-202ENST00000471307 BBIP1A8MTZ0 92 aa4□□□□□ -1.77
CCDC39-202ENST00000471307 H0YIG0 161 aa4□□□□□ -1.77
CCDC39-202ENST00000471307 H3BMH7 237 aa4□□□□□ -1.77
CCDC39-202ENST00000471307 CFLARO15519 480 aa4□□□□□ -1.77
CCDC39-202ENST00000471307 P2RX6O15547 441 aa4□□□□□ -1.77
CCDC39-202ENST00000471307 HCRTR1O43613 425 aa4□□□□□ -1.77
CCDC39-202ENST00000471307 TBX19O60806 448 aa4□□□□□ -1.77
CCDC39-202ENST00000471307 EEDO75530 441 aaKnown RBP4□□□□□ -1.77
CCDC39-202ENST00000471307 KRT34O76011 436 aa4□□□□□ -1.77
CCDC39-202ENST00000471307 NSA2O95478 260 aaKnown RBP4□□□□□ -1.77
CCDC39-202ENST00000471307 KRT16P08779 473 aa4□□□□□ -1.77
CCDC39-202ENST00000471307 HBQ1P09105 142 aa4□□□□□ -1.77
CCDC39-202ENST00000471307 FOLR1P15328 257 aa4□□□□□ -1.77
CCDC39-202ENST00000471307 S100A3P33764 101 aa4□□□□□ -1.77
CCDC39-202ENST00000471307 HPCAL1P37235 193 aa4□□□□□ -1.77
CCDC39-202ENST00000471307 KCNK10P57789 538 aa4□□□□□ -1.77
CCDC39-202ENST00000471307 RAB8AP61006 207 aa4□□□□□ -1.77
CCDC39-202ENST00000471307 NAAAQ02083 359 aa4□□□□□ -1.77
CCDC39-202ENST00000471307 C2orf80Q0P641 193 aa4□□□□□ -1.77
CCDC39-202ENST00000471307 BNIP1Q12981 228 aa4□□□□□ -1.77
CCDC39-202ENST00000471307 SLAMF1Q13291 335 aa4□□□□□ -1.77
CCDC39-202ENST00000471307 RCAN2Q14206 197 aa4□□□□□ -1.77
CCDC39-202ENST00000471307 HKDC1Q2TB90 917 aa4□□□□□ -1.77
CCDC39-202ENST00000471307 DEFB134Q4QY38 66 aa4□□□□□ -1.77
CCDC39-202ENST00000471307 COQ5Q5HYK3 327 aa4□□□□□ -1.77
CCDC39-202ENST00000471307 CPTPQ5TA50 214 aa4□□□□□ -1.77
CCDC39-202ENST00000471307 ANXA8L1Q5VT79 327 aa4□□□□□ -1.77
CCDC39-202ENST00000471307 FAM71E1Q6IPT2 247 aa4□□□□□ -1.77
CCDC39-202ENST00000471307 ASCL5Q7RTU5 278 aa4□□□□□ -1.77
CCDC39-202ENST00000471307 NUFIP2Q7Z417 695 aaKnown RBP4□□□□□ -1.77
CCDC39-202ENST00000471307 FUNDC1Q8IVP5 155 aa4□□□□□ -1.77
CCDC39-202ENST00000471307 LAX1Q8IWV1 398 aa4□□□□□ -1.77
CCDC39-202ENST00000471307 TTC29Q8NA56 475 aaPredicted RBP4□□□□□ -1.77
CCDC39-202ENST00000471307 FAM71CQ8NEG0 241 aa4□□□□□ -1.77
CCDC39-202ENST00000471307 OR8J2Q8NGG1 315 aa4□□□□□ -1.77
CCDC39-202ENST00000471307 GGHQ92820 318 aa4□□□□□ -1.77
CCDC39-202ENST00000471307 TEX37Q96LM6 180 aa4□□□□□ -1.77
CCDC39-202ENST00000471307 TSSK3Q96PN8 268 aa4□□□□□ -1.77
CCDC39-202ENST00000471307 FAIM2Q9BWQ8 316 aa4□□□□□ -1.77
CCDC39-202ENST00000471307 NMNAT2Q9BZQ4 307 aa4□□□□□ -1.77
CCDC39-202ENST00000471307 AICDAQ9GZX7 198 aa4□□□□□ -1.77
CCDC39-202ENST00000471307 CLMPQ9H6B4 373 aa4□□□□□ -1.77
CCDC39-202ENST00000471307 REEP4Q9H6H4 257 aa4□□□□□ -1.77
CCDC39-202ENST00000471307 SYNDIG1Q9H7V2 258 aa4□□□□□ -1.77
CCDC39-202ENST00000471307 RMND5AQ9H871 391 aa4□□□□□ -1.77
CCDC39-202ENST00000471307 ANKHQ9HCJ1 492 aa4□□□□□ -1.77
CCDC39-202ENST00000471307 FANCFQ9NPI8 374 aa4□□□□□ -1.77
CCDC39-202ENST00000471307 LHX9Q9NQ69 397 aa4□□□□□ -1.77
CCDC39-202ENST00000471307 FBXO8Q9NRD0 319 aa4□□□□□ -1.77
CCDC39-202ENST00000471307 FAM212BQ9NTI7 297 aaPredicted RBP4□□□□□ -1.77
CCDC39-202ENST00000471307 CCDC167Q9P0B6 97 aa4□□□□□ -1.77
CCDC39-202ENST00000471307 NDUFA13Q9P0J0 144 aa4□□□□□ -1.77
CCDC39-202ENST00000471307 C6orf203Q9P0P8 240 aaPredicted RBP4□□□□□ -1.77
CCDC39-202ENST00000471307 PHF11Q9UIL8 331 aa4□□□□□ -1.77
CCDC39-202ENST00000471307 PSME2Q9UL46 239 aa4□□□□□ -1.77
CCDC39-202ENST00000471307 SLC6A5Q9Y345 797 aa4□□□□□ -1.77
CCDC39-202ENST00000471307 SH3GLB1Q9Y371 365 aa4□□□□□ -1.77
CCDC39-202ENST00000471307 NDUFAF1Q9Y375 327 aa4□□□□□ -1.77
CCDC39-202ENST00000471307 ASB4Q9Y574 426 aa4□□□□□ -1.77
CCDC39-202ENST00000471307 SPACA6W5XKT8 324 aa4□□□□□ -1.77
CCDC39-202ENST00000471307 C15orf38-AP3S2A0A0A6YYH1 394 aa3.99□□□□□ -1.77
CCDC39-202ENST00000471307 EFCAB7A8K855 629 aa3.99□□□□□ -1.77
CCDC39-202ENST00000471307 FOXI3A8MTJ6 420 aaPredicted RBP3.99□□□□□ -1.77
CCDC39-202ENST00000471307 SCAMP2O15127 329 aaKnown RBP3.99□□□□□ -1.77
CCDC39-202ENST00000471307 POLR1CO15160 346 aaPredicted RBP3.99□□□□□ -1.77
CCDC39-202ENST00000471307 CASC3O15234 703 aaKnown RBP3.99□□□□□ -1.77
CCDC39-202ENST00000471307 CHST10O43529 356 aa3.99□□□□□ -1.77
CCDC39-202ENST00000471307 STATHP02808 62 aa3.99□□□□□ -1.77
CCDC39-202ENST00000471307 IL3P08700 152 aa3.99□□□□□ -1.77
CCDC39-202ENST00000471307 LAMP1P11279 417 aa3.99□□□□□ -1.77
CCDC39-202ENST00000471307 RNH1P13489 461 aaKnown RBP3.99□□□□□ -1.77
CCDC39-202ENST00000471307 CPN2P22792 545 aa3.99□□□□□ -1.77
CCDC39-202ENST00000471307 PTPN4P29074 926 aa3.99□□□□□ -1.77
CCDC39-202ENST00000471307 IL12AP29459 219 aa3.99□□□□□ -1.77
CCDC39-202ENST00000471307 MPIP34949 423 aa3.99□□□□□ -1.77
CCDC39-202ENST00000471307 LIM2P55344 173 aa3.99□□□□□ -1.77
CCDC39-202ENST00000471307 NDPQ00604 133 aa3.99□□□□□ -1.77
CCDC39-202ENST00000471307 BIKQ13323 160 aa3.99□□□□□ -1.77
CCDC39-202ENST00000471307 EIF3IQ13347 325 aaKnown RBP3.99□□□□□ -1.77
CCDC39-202ENST00000471307 ART3Q13508 389 aa3.99□□□□□ -1.77
CCDC39-202ENST00000471307 C16orf72Q14CZ0 275 aa3.99□□□□□ -1.77
CCDC39-202ENST00000471307 ISXQ2M1V0 245 aa3.99□□□□□ -1.77
CCDC39-202ENST00000471307 DEFB110Q30KQ9 67 aa3.99□□□□□ -1.77
CCDC39-202ENST00000471307 MAJINQ3KP22 176 aa3.99□□□□□ -1.77
CCDC39-202ENST00000471307 VPS26BQ4G0F5 336 aa3.99□□□□□ -1.77
CCDC39-202ENST00000471307 RHBDD2Q6NTF9 364 aa3.99□□□□□ -1.77
CCDC39-202ENST00000471307 PRMT9Q6P2P2 845 aa3.99□□□□□ -1.77
CCDC39-202ENST00000471307 HACD2Q6Y1H2 254 aa3.99□□□□□ -1.77
CCDC39-202ENST00000471307 C17orf107Q6ZR85 190 aa3.99□□□□□ -1.77
CCDC39-202ENST00000471307 KRTCAP2Q8N6L1 136 aa3.99□□□□□ -1.77
CCDC39-202ENST00000471307 RNF148Q8N7C7 305 aa3.99□□□□□ -1.77
CCDC39-202ENST00000471307 OR9I1Q8NGQ6 314 aa3.99□□□□□ -1.77
CCDC39-202ENST00000471307 OR9A4Q8NGU2 314 aa3.99□□□□□ -1.77
CCDC39-202ENST00000471307 CLHC1Q8NHS4 586 aa3.99□□□□□ -1.77
CCDC39-202ENST00000471307 FAM46BQ96A09 425 aa3.99□□□□□ -1.77
CCDC39-202ENST00000471307 PINX1Q96BK5 328 aaKnown RBP3.99□□□□□ -1.77
CCDC39-202ENST00000471307 ROPN1LQ96C74 230 aa3.99□□□□□ -1.77
CCDC39-202ENST00000471307 PPCDCQ96CD2 204 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms