RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 OR9K2Q8NGE7 335 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 OR51S1Q8NGJ8 323 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 OR4C16Q8NGL9 310 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 OR2T27Q8NH04 317 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 OR8U1Q8NH10 309 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 OR14L1PQ8NHC6 308 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 SUN3Q8TAQ9 357 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 ARRDC2Q8TBH0 407 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 LGALS14Q8TCE9 139 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 GRHL3Q8TE85 626 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 OR5P2Q8WZ92 322 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 SMPDL3AQ92484 453 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 DCUN1D4Q92564 292 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 HIST1H2BHQ93079 126 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 UBE2E3Q969T4 207 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 TMEM106AQ96A25 262 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 PTX4Q96A99 478 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 MOAP1Q96BY2 351 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 MUCL1Q96DR8 90 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 MS4A6EQ96DS6 147 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 NEURL3Q96EH8 262 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 DTD2Q96FN9 168 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 HMCESQ96FZ2 354 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 ADAD1Q96M93 576 aaKnown RBP4.38□□□□□ -1.71
SF3B1-207ENST00000468925 ZNF75AQ96N20 296 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 PGLYRP2Q96PD5 576 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 TECTBQ96PL2 329 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 HIST1H2BNQ99877 126 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 HIST1H2BMQ99879 126 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 HIST1H2BLQ99880 126 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 C20orf144Q9BQM9 153 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 ADAT1Q9BUB4 502 aaKnown RBP4.38□□□□□ -1.71
SF3B1-207ENST00000468925 SNHG12Q9BXW3 62 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 GPR87Q9BY21 358 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 HIPK2Q9H2X6 1198 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 OR51I1Q9H343 314 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 TAF9BQ9HBM6 251 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 BCL2L10Q9HD36 194 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 RAB18Q9NP72 206 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 KLHL28Q9NXS3 571 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 AHSPQ9NZD4 102 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 MARCH2Q9P0N8 246 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 P2RX2Q9UBL9 471 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 FARSAQ9Y285 508 aaKnown RBP4.38□□□□□ -1.71
SF3B1-207ENST00000468925 COL4A4P53420 1690 aaPredicted RBP4.38□□□□□ -1.71
SF3B1-207ENST00000468925 NUP205Q92621 2012 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 COL5A3P25940 1745 aaPredicted RBP4.38□□□□□ -1.71
SF3B1-207ENST00000468925 PHIPQ8WWQ0 1821 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 hCG_1809904A0A1W2PP81 198 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 A0A1W2PR64 198 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 A0A1W2PRV1 198 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 SMIM30A4D0T7 59 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 C2orf78A6NCI8 922 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 TLCD2A6NGC4 264 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 DDTLA6NHG4 134 aaPredicted RBP4.37□□□□□ -1.71
SF3B1-207ENST00000468925 IFITM10A6NMD0 228 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 J3KTA2 159 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 ZNF561-AS1K7EIQ3 104 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 K7EPK0 472 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 PIRO00625 290 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 SEPT4O43236 478 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 PLRG1O43660 514 aaKnown RBP4.37□□□□□ -1.71
SF3B1-207ENST00000468925 GOSR1O95249 250 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 TNFRSF6BO95407 300 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 SOX14O95416 240 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 SYNGR4O95473 234 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 EDN1P05305 212 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 ANXA4P09525 319 aaPredicted RBP4.37□□□□□ -1.71
SF3B1-207ENST00000468925 CT45A8P0DMV1 189 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 CT45A9P0DMV2 189 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 SCGB1A1P11684 91 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 C6P13671 934 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 AKR1A1P14550 325 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 FABP4P15090 132 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 CD40P25942 277 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 PCSK1P29120 753 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 AQP1P29972 269 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 TIA1P31483 386 aaKnown RBP eCLIP4.37□□□□□ -1.71
SF3B1-207ENST00000468925 WNT5AP41221 380 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 GPR4P46093 362 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 GLIPR1P48060 266 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 SLC6A12P48065 614 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 GABRA4P48169 554 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 ARRB1P49407 418 aaPredicted RBP4.37□□□□□ -1.71
SF3B1-207ENST00000468925 AKR1C2P52895 323 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 MANFP55145 182 aaKnown RBP4.37□□□□□ -1.71
SF3B1-207ENST00000468925 LIM2P55344 173 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 PRPS1P60891 318 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 RPS13P62277 151 aaKnown RBP4.37□□□□□ -1.71
SF3B1-207ENST00000468925 PPP2CBP62714 309 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 PPP2CAP67775 309 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 SIM1P81133 766 aaPredicted RBP4.37□□□□□ -1.71
SF3B1-207ENST00000468925 FAM189BP81408 668 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 CDK3Q00526 305 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 PSG6Q00889 435 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 AKR1C1Q04828 323 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 SLC10A7Q0GE19 358 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 GPNMBQ14956 572 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 HERPUD1Q15011 391 aa4.37□□□□□ -1.71
SF3B1-207ENST00000468925 CDK5R1Q15078 307 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms