RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 FABP6P51161 128 aa12.57□□□□□ -0.4
COL27A1-203ENST00000468565 BCAP31P51572 246 aa12.57□□□□□ -0.4
COL27A1-203ENST00000468565 BIDP55957 195 aa12.57□□□□□ -0.4
COL27A1-203ENST00000468565 CAMK2DQ13557 499 aa12.57□□□□□ -0.4
COL27A1-203ENST00000468565 WDFY1Q8IWB7 410 aa12.57□□□□□ -0.4
COL27A1-203ENST00000468565 PFN4Q8NHR9 129 aa12.57□□□□□ -0.4
COL27A1-203ENST00000468565 TMEM54Q969K7 222 aa12.57□□□□□ -0.4
COL27A1-203ENST00000468565 SGTBQ96EQ0 304 aa12.57□□□□□ -0.4
COL27A1-203ENST00000468565 ULBP2Q9BZM5 246 aa12.57□□□□□ -0.4
COL27A1-203ENST00000468565 IL20Q9NYY1 176 aa12.57□□□□□ -0.4
COL27A1-203ENST00000468565 SSR3Q9UNL2 185 aa12.57□□□□□ -0.4
COL27A1-203ENST00000468565 MED31Q9Y3C7 131 aa12.57□□□□□ -0.4
COL27A1-203ENST00000468565 SETD2Q9BYW2 2564 aaPredicted RBP12.57□□□□□ -0.4
COL27A1-203ENST00000468565 ZFHX3Q15911 3703 aa12.57□□□□□ -0.4
COL27A1-203ENST00000468565 PNMA8CA0A1B0GUJ8 204 aa12.56□□□□□ -0.4
COL27A1-203ENST00000468565 FUOMA2VDF0 154 aa12.56□□□□□ -0.4
COL27A1-203ENST00000468565 ISPDA4D126 451 aa12.56□□□□□ -0.4
COL27A1-203ENST00000468565 FAM171A2A8MVW0 826 aa12.56□□□□□ -0.4
COL27A1-203ENST00000468565 H7C1Q1 480 aa12.56□□□□□ -0.4
COL27A1-203ENST00000468565 CRYAAP02489 173 aa12.56□□□□□ -0.4
COL27A1-203ENST00000468565 CBR1P16152 277 aa12.56□□□□□ -0.4
COL27A1-203ENST00000468565 FUT1P19526 365 aa12.56□□□□□ -0.4
COL27A1-203ENST00000468565 APOBEC3AP31941 199 aaPredicted RBP12.56□□□□□ -0.4
COL27A1-203ENST00000468565 ARR3P36575 388 aa12.56□□□□□ -0.4
COL27A1-203ENST00000468565 MTNR1AP48039 350 aa12.56□□□□□ -0.4
COL27A1-203ENST00000468565 ZNF181Q2M3W8 571 aa12.56□□□□□ -0.4
COL27A1-203ENST00000468565 CLEC12AQ5QGZ9 265 aa12.56□□□□□ -0.4
COL27A1-203ENST00000468565 ZNF620Q6ZNG0 422 aa12.56□□□□□ -0.4
COL27A1-203ENST00000468565 RNF113BQ8IZP6 322 aaKnown RBP12.56□□□□□ -0.4
COL27A1-203ENST00000468565 KCNS3Q9BQ31 491 aa12.56□□□□□ -0.4
COL27A1-203ENST00000468565 NUAK2Q9H093 628 aa12.56□□□□□ -0.4
COL27A1-203ENST00000468565 GSX1Q9H4S2 264 aaPredicted RBP12.56□□□□□ -0.4
COL27A1-203ENST00000468565 BARX1Q9HBU1 254 aaPredicted RBP12.56□□□□□ -0.4
COL27A1-203ENST00000468565 ISYNA1Q9NPH2 558 aa12.56□□□□□ -0.4
COL27A1-203ENST00000468565 C20orf141Q9NUB4 165 aa12.56□□□□□ -0.4
COL27A1-203ENST00000468565 MOKQ9UQ07 419 aa12.56□□□□□ -0.4
COL27A1-203ENST00000468565 TMEM129A0AVI4 362 aa12.56□□□□□ -0.4
COL27A1-203ENST00000468565 PIP5K1CO60331 668 aa12.56□□□□□ -0.4
COL27A1-203ENST00000468565 UPK1BO75841 260 aa12.56□□□□□ -0.4
COL27A1-203ENST00000468565 TSPAN19P0C672 248 aa12.56□□□□□ -0.4
COL27A1-203ENST00000468565 CECR9P0C854 216 aa12.56□□□□□ -0.4
COL27A1-203ENST00000468565 ETV1P50549 477 aa12.56□□□□□ -0.4
COL27A1-203ENST00000468565 WNT4P56705 351 aa12.56□□□□□ -0.4
COL27A1-203ENST00000468565 NAAAQ02083 359 aa12.56□□□□□ -0.4
COL27A1-203ENST00000468565 OR4Q3Q8NH05 313 aa12.56□□□□□ -0.4
COL27A1-203ENST00000468565 SLC25A44Q96H78 314 aaPredicted RBP12.56□□□□□ -0.4
COL27A1-203ENST00000468565 GLTPQ9NZD2 209 aa12.56□□□□□ -0.4
COL27A1-203ENST00000468565 CR1P17927 2039 aa12.56□□□□□ -0.4
COL27A1-203ENST00000468565 A0A075B6Q4 140 aa12.55□□□□□ -0.4
COL27A1-203ENST00000468565 UNC119BA6NIH7 251 aa12.55□□□□□ -0.4
COL27A1-203ENST00000468565 BLOC1S5-TXNDC5H3BN57 136 aa12.55□□□□□ -0.4
COL27A1-203ENST00000468565 SURF4O15260 269 aa12.55□□□□□ -0.4
COL27A1-203ENST00000468565 IGHV4-39P01824 125 aa12.55□□□□□ -0.4
COL27A1-203ENST00000468565 CPEP16870 476 aa12.55□□□□□ -0.4
COL27A1-203ENST00000468565 S100A1P23297 94 aa12.55□□□□□ -0.4
COL27A1-203ENST00000468565 IFITM3Q01628 133 aa12.55□□□□□ -0.4
COL27A1-203ENST00000468565 RPL18Q07020 188 aaKnown RBP12.55□□□□□ -0.4
COL27A1-203ENST00000468565 DOC2BQ14184 412 aa12.55□□□□□ -0.4
COL27A1-203ENST00000468565 CLEC12BQ2HXU8 276 aa12.55□□□□□ -0.4
COL27A1-203ENST00000468565 PLEKHG7Q6ZR37 379 aa12.55□□□□□ -0.4
COL27A1-203ENST00000468565 HDDC2Q7Z4H3 204 aa12.55□□□□□ -0.4
COL27A1-203ENST00000468565 PHC2Q8IXK0 858 aa12.55□□□□□ -0.4
COL27A1-203ENST00000468565 CIARTQ8N365 385 aaPredicted RBP12.55□□□□□ -0.4
COL27A1-203ENST00000468565 OR2T33Q8NG76 320 aa12.55□□□□□ -0.4
COL27A1-203ENST00000468565 FOXB1Q99853 325 aa12.55□□□□□ -0.4
COL27A1-203ENST00000468565 H2AFY2Q9P0M6 372 aaPredicted RBP12.55□□□□□ -0.4
COL27A1-203ENST00000468565 TMEM5Q9Y2B1 443 aa12.55□□□□□ -0.4
COL27A1-203ENST00000468565 A0A1W2PRG6 482 aa12.54□□□□□ -0.4
COL27A1-203ENST00000468565 ZNF503-AS2A6NEH8 195 aa12.54□□□□□ -0.4
COL27A1-203ENST00000468565 CENPBD1B2RD01 187 aa12.54□□□□□ -0.4
COL27A1-203ENST00000468565 ZNF670-ZNF695F2Z2N8 137 aa12.54□□□□□ -0.4
COL27A1-203ENST00000468565 CRYBB2P43320 205 aa12.54□□□□□ -0.4
COL27A1-203ENST00000468565 MELKQ14680 651 aa12.54□□□□□ -0.4
COL27A1-203ENST00000468565 ZNF813Q6ZN06 617 aa12.54□□□□□ -0.4
COL27A1-203ENST00000468565 CDK20Q8IZL9 346 aa12.54□□□□□ -0.4
COL27A1-203ENST00000468565 OR52L1Q8NGH7 329 aa12.54□□□□□ -0.4
COL27A1-203ENST00000468565 NANOS1Q8WY41 292 aaKnown RBP12.54□□□□□ -0.4
COL27A1-203ENST00000468565 CEP19Q96LK0 163 aa12.54□□□□□ -0.4
COL27A1-203ENST00000468565 CACNG6Q9BXT2 260 aa12.54□□□□□ -0.4
COL27A1-203ENST00000468565 B3GNT2Q9NY97 397 aa12.54□□□□□ -0.4
COL27A1-203ENST00000468565 UGT2A1Q9Y4X1 527 aa12.54□□□□□ -0.4
COL27A1-203ENST00000468565 CHD3Q12873 2000 aaKnown RBP12.54□□□□□ -0.4
COL27A1-203ENST00000468565 NPIPB13A6NJU9 1138 aa12.54□□□□□ -0.4
COL27A1-203ENST00000468565 NPIPB4C9JG80 1138 aa12.54□□□□□ -0.4
COL27A1-203ENST00000468565 LOC110117498-PIK3R3F6TDL0 507 aa12.54□□□□□ -0.4
COL27A1-203ENST00000468565 H7C417 338 aa12.54□□□□□ -0.4
COL27A1-203ENST00000468565 IGHG1P01857 330 aa12.54□□□□□ -0.4
COL27A1-203ENST00000468565 PGA4P0DJD7 388 aa12.54□□□□□ -0.4
COL27A1-203ENST00000468565 PGA3P0DJD8 388 aa12.54□□□□□ -0.4
COL27A1-203ENST00000468565 ETV6P41212 452 aa12.54□□□□□ -0.4
COL27A1-203ENST00000468565 CAPZA2P47755 286 aa12.54□□□□□ -0.4
COL27A1-203ENST00000468565 DAP3P51398 398 aaKnown RBP12.54□□□□□ -0.4
COL27A1-203ENST00000468565 RORCP51449 518 aa12.54□□□□□ -0.4
COL27A1-203ENST00000468565 IDH3GP51553 393 aaPredicted RBP12.54□□□□□ -0.4
COL27A1-203ENST00000468565 SPANXN2Q5MJ10 180 aa12.54□□□□□ -0.4
COL27A1-203ENST00000468565 AADACL4Q5VUY2 407 aa12.54□□□□□ -0.4
COL27A1-203ENST00000468565 LIPKQ5VXJ0 399 aa12.54□□□□□ -0.4
COL27A1-203ENST00000468565 RPL13AP3Q6NVV1 102 aa12.54□□□□□ -0.4
COL27A1-203ENST00000468565 DNM1P46Q6ZS02 220 aa12.54□□□□□ -0.4
COL27A1-203ENST00000468565 MDP1Q86V88 176 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms