RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 MAP2K4P45985 399 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 TDGF1P3P51864 188 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 CASP6P55212 293 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 EFNB1P98172 346 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 PMPCAQ10713 525 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 ST3GAL4Q11206 333 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 FOXF2Q12947 444 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 FHL3Q13643 280 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 RNPS1Q15287 305 aaKnown RBP3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 IGFBP7Q16270 282 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 MEP1BQ16820 701 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 KRTAP15-1Q3LI76 137 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 ACSF3Q4G176 576 aaPredicted RBP3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 KLHL22Q53GT1 634 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 RBM48Q5RL73 367 aaKnown RBP3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 THEM4Q5T1C6 240 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 TSPO2Q5TGU0 170 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 LCN1P1Q5VSP4 162 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 AADACL4Q5VUY2 407 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 NXNL2Q5VZ03 156 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 ZNF324BQ6AW86 544 aaPredicted RBP3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 RTL6Q6ICC9 239 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 TMEM154Q6P9G4 183 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 DNM1P34Q6PK57 102 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 SLC25A47Q6Q0C1 308 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 NHLRC1Q6VVB1 395 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 B3GNT6Q6ZMB0 384 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 AHSA2Q719I0 299 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 LHFPL3Q86UP9 236 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 DOLPP1Q86YN1 238 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 ERI1Q8IV48 349 aaKnown RBP3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 GID4Q8IVV7 300 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 C20orf196Q8IYI0 205 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 OR6V1Q8N148 313 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 LRRC18Q8N456 261 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 OR10H4Q8NGA5 316 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 OR4F15Q8NGB8 312 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 OR51G2Q8NGK0 314 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 OR2T4Q8NH00 348 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 OR6X1Q8NH79 312 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 ZNF519Q8TB69 540 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 RNF128Q8TEB7 428 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 THEM6Q8WUY1 208 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 SGCDQ92629 289 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 HTRA1Q92743 480 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 MYDGFQ969H8 173 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 TMEM54Q969K7 222 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 MCHR2Q969V1 340 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 LGALS12Q96DT0 336 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 SLC25A44Q96H78 314 aaPredicted RBP3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 TMEM80Q96HE8 168 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 OR2M2Q96R28 347 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 NR1H4Q96RI1 486 aaPredicted RBP3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 DDOQ99489 341 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 TEAD3Q99594 435 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 RHNO1Q9BSD3 238 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 COPS4Q9BT78 406 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 ALG12Q9BV10 488 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 TTTY10Q9BZA0 68 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 ULBP2Q9BZM5 246 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 PRDM13Q9H4Q3 707 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 B3GAT2Q9NPZ5 323 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 CHCHD3Q9NX63 227 aaKnown RBP3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 GLTPQ9NZD2 209 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 EMC3Q9P0I2 261 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 TINAGQ9UJW2 476 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 ZNF175Q9Y473 711 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 SNX5Q9Y5X3 404 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 FLVCR1Q9Y5Y0 555 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 COMMD3-BMI1R4GMX3 469 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 CEP295Q9C0D2 2601 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 DCHS1Q96JQ0 3298 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 MPDZO75970 2070 aa3.58□□□□□ -1.84
TMEM39A-204ENST00000468545 ASPMQ8IZT6 3477 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 LOC102725191A0A1B0GVB3 256 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 DAPL1A0PJW8 107 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 CIB4A0PJX0 185 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 CCDC182A6NF36 153 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 EFCAB10A6NFE3 127 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 CD8B2A6NJW9 211 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 ZNF724A8MTY0 619 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 ZNF670-ZNF695F2Z2N8 137 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 ZNF593O00488 134 aaPredicted RBP3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 CCL21O00585 134 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 MAGEB4O15481 346 aaPredicted RBP3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 DHHO43323 396 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 SELENOFO60613 162 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 WDR1O75083 606 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 JTBO76095 146 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 TOXO94900 526 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 TNFAIP8O95379 198 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 RAB36O95755 333 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 FADS2O95864 444 aaKnown RBP3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 IGHMP01871 453 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 MT-ND2P03891 347 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 SPARCP09486 303 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 PATE4P0C8F1 98 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 PGA4P0DJD7 388 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 PGA3P0DJD8 388 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms