RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 AP3S2P59780 193 aa9□□□□□ -0.97
MSH5-213ENST00000468136 CLN3Q13286 438 aa9□□□□□ -0.97
MSH5-213ENST00000468136 RAB35Q15286 201 aa9□□□□□ -0.97
MSH5-213ENST00000468136 TGIF1Q15583 401 aa9□□□□□ -0.97
MSH5-213ENST00000468136 SLC25A35Q3KQZ1 300 aa9□□□□□ -0.97
MSH5-213ENST00000468136 ELFN2Q5R3F8 820 aa9□□□□□ -0.97
MSH5-213ENST00000468136 DRAM2Q6UX65 266 aa9□□□□□ -0.97
MSH5-213ENST00000468136 IGFL3Q6UXB1 125 aa9□□□□□ -0.97
MSH5-213ENST00000468136 ZNF627Q7L945 461 aa9□□□□□ -0.97
MSH5-213ENST00000468136 CDH24Q86UP0 819 aa9□□□□□ -0.97
MSH5-213ENST00000468136 MCEMP1Q8IX19 187 aa9□□□□□ -0.97
MSH5-213ENST00000468136 UBQLNLQ8IYU4 475 aa9□□□□□ -0.97
MSH5-213ENST00000468136 ZNF433Q8N7K0 673 aaPredicted RBP9□□□□□ -0.97
MSH5-213ENST00000468136 OR5D14Q8NGL3 314 aa9□□□□□ -0.97
MSH5-213ENST00000468136 OR6M1Q8NGM8 313 aa9□□□□□ -0.97
MSH5-213ENST00000468136 OR13C3Q8NGS6 347 aa9□□□□□ -0.97
MSH5-213ENST00000468136 NABP1Q96AH0 204 aa9□□□□□ -0.97
MSH5-213ENST00000468136 ZC3HAV1LQ96H79 300 aaKnown RBP9□□□□□ -0.97
MSH5-213ENST00000468136 FOXN4Q96NZ1 517 aa9□□□□□ -0.97
MSH5-213ENST00000468136 UQCC2Q9BRT2 126 aa9□□□□□ -0.97
MSH5-213ENST00000468136 ZNF416Q9BWM5 594 aa9□□□□□ -0.97
MSH5-213ENST00000468136 SLCO5A1Q9H2Y9 848 aa9□□□□□ -0.97
MSH5-213ENST00000468136 RGCCQ9H4X1 137 aa9□□□□□ -0.97
MSH5-213ENST00000468136 LDAHQ9H6V9 325 aa9□□□□□ -0.97
MSH5-213ENST00000468136 ZNF275Q9NSD4 429 aaPredicted RBP9□□□□□ -0.97
MSH5-213ENST00000468136 TMEM38BQ9NVV0 291 aa9□□□□□ -0.97
MSH5-213ENST00000468136 DLL3Q9NYJ7 618 aa9□□□□□ -0.97
MSH5-213ENST00000468136 ING1Q9UK53 422 aaPredicted RBP9□□□□□ -0.97
MSH5-213ENST00000468136 GTF2A1LQ9UNN4 478 aa9□□□□□ -0.97
MSH5-213ENST00000468136 NOSIPQ9Y314 301 aaKnown RBP9□□□□□ -0.97
MSH5-213ENST00000468136 PCDHGA9Q9Y5G4 932 aaKnown RBP9□□□□□ -0.97
MSH5-213ENST00000468136 IGHV3-15A0A0B4J1V0 119 aa8.99□□□□□ -0.97
MSH5-213ENST00000468136 A0A1B0GVG6 124 aa8.99□□□□□ -0.97
MSH5-213ENST00000468136 LOC390937A0A1W2PQ73 354 aa8.99□□□□□ -0.97
MSH5-213ENST00000468136 CENPXA8MT69 81 aa8.99□□□□□ -0.97
MSH5-213ENST00000468136 FAM166BA8MTA8 275 aa8.99□□□□□ -0.97
MSH5-213ENST00000468136 DVL2O14641 736 aa8.99□□□□□ -0.97
MSH5-213ENST00000468136 MTRF1O75570 445 aaKnown RBP8.99□□□□□ -0.97
MSH5-213ENST00000468136 KRT33AO76009 404 aa8.99□□□□□ -0.97
MSH5-213ENST00000468136 YES1P07947 543 aa8.99□□□□□ -0.97
MSH5-213ENST00000468136 CSF3P09919 207 aa8.99□□□□□ -0.97
MSH5-213ENST00000468136 ACSM4P0C7M7 580 aa8.99□□□□□ -0.97
MSH5-213ENST00000468136 SOX2P48431 317 aa8.99□□□□□ -0.97
MSH5-213ENST00000468136 STARP49675 285 aa8.99□□□□□ -0.97
MSH5-213ENST00000468136 BCAP31P51572 246 aa8.99□□□□□ -0.97
MSH5-213ENST00000468136 CCL11P51671 97 aa8.99□□□□□ -0.97
MSH5-213ENST00000468136 TPTEP56180 551 aa8.99□□□□□ -0.97
MSH5-213ENST00000468136 MFGE8Q08431 387 aaPredicted RBP8.99□□□□□ -0.97
MSH5-213ENST00000468136 ENDOGQ14249 297 aaKnown RBP8.99□□□□□ -0.97
MSH5-213ENST00000468136 RAB11BQ15907 218 aa8.99□□□□□ -0.97
MSH5-213ENST00000468136 CFAP77Q6ZQR2 320 aa8.99□□□□□ -0.97
MSH5-213ENST00000468136 Q6ZSR3 168 aa8.99□□□□□ -0.97
MSH5-213ENST00000468136 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.99□□□□□ -0.97
MSH5-213ENST00000468136 ZADH2Q8N4Q0 377 aa8.99□□□□□ -0.97
MSH5-213ENST00000468136 ZNF283Q8N7M2 679 aa8.99□□□□□ -0.97
MSH5-213ENST00000468136 RFT1Q96AA3 541 aa8.99□□□□□ -0.97
MSH5-213ENST00000468136 HAVCR1Q96D42 359 aa8.99□□□□□ -0.97
MSH5-213ENST00000468136 CPNE2Q96FN4 548 aaPredicted RBP8.99□□□□□ -0.97
MSH5-213ENST00000468136 FOXB1Q99853 325 aa8.99□□□□□ -0.97
MSH5-213ENST00000468136 CCDC86Q9H6F5 360 aaKnown RBP8.99□□□□□ -0.97
MSH5-213ENST00000468136 EXO5Q9H790 373 aa8.99□□□□□ -0.97
MSH5-213ENST00000468136 EMC7Q9NPA0 242 aa8.99□□□□□ -0.97
MSH5-213ENST00000468136 PNRC2Q9NPJ4 139 aaKnown RBP8.99□□□□□ -0.97
MSH5-213ENST00000468136 NPAP1Q9NZP6 1156 aa8.99□□□□□ -0.97
MSH5-213ENST00000468136 TIMM10BQ9Y5J6 103 aa8.99□□□□□ -0.97
MSH5-213ENST00000468136 CNTRLQ7Z7A1 2325 aa8.99□□□□□ -0.97
MSH5-213ENST00000468136 LOC100289279A0A1B0GTE1 492 aa8.98□□□□□ -0.97
MSH5-213ENST00000468136 A0A1B0GVC2 190 aa8.98□□□□□ -0.97
MSH5-213ENST00000468136 A0A1W2PPK0 400 aa8.98□□□□□ -0.97
MSH5-213ENST00000468136 A0A1W2PQ09 198 aa8.98□□□□□ -0.97
MSH5-213ENST00000468136 FUOMA2VDF0 154 aa8.98□□□□□ -0.97
MSH5-213ENST00000468136 SMIM30A4D0T7 59 aa8.98□□□□□ -0.97
MSH5-213ENST00000468136 OR6C6A6NF89 314 aa8.98□□□□□ -0.97
MSH5-213ENST00000468136 A6NL46 340 aa8.98□□□□□ -0.97
MSH5-213ENST00000468136 ZNF587BE7ETH6 402 aa8.98□□□□□ -0.97
MSH5-213ENST00000468136 TFECO14948 347 aaPredicted RBP8.98□□□□□ -0.97
MSH5-213ENST00000468136 ECDO95905 644 aaPredicted RBP8.98□□□□□ -0.97
MSH5-213ENST00000468136 TTRP02766 147 aa8.98□□□□□ -0.97
MSH5-213ENST00000468136 ALDOBP05062 364 aa8.98□□□□□ -0.97
MSH5-213ENST00000468136 EIF4EP06730 217 aaKnown RBP8.98□□□□□ -0.97
MSH5-213ENST00000468136 GSTT2BP0CG30 244 aa8.98□□□□□ -0.97
MSH5-213ENST00000468136 COX5BP10606 129 aa8.98□□□□□ -0.97
MSH5-213ENST00000468136 ZNF20P17024 532 aa8.98□□□□□ -0.97
MSH5-213ENST00000468136 CDAP32320 146 aa8.98□□□□□ -0.97
MSH5-213ENST00000468136 GNALP38405 381 aa8.98□□□□□ -0.97
MSH5-213ENST00000468136 DDOSTP39656 456 aa8.98□□□□□ -0.97
MSH5-213ENST00000468136 CX3CR1P49238 355 aa8.98□□□□□ -0.97
MSH5-213ENST00000468136 SSBP1Q04837 148 aaKnown RBP8.98□□□□□ -0.97
MSH5-213ENST00000468136 BAK1Q16611 211 aa8.98□□□□□ -0.97
MSH5-213ENST00000468136 C1orf100Q5SVJ3 147 aa8.98□□□□□ -0.97
MSH5-213ENST00000468136 CORO6Q6QEF8 472 aa8.98□□□□□ -0.97
MSH5-213ENST00000468136 SPATC1Q76KD6 591 aa8.98□□□□□ -0.97
MSH5-213ENST00000468136 FGD2Q7Z6J4 655 aa8.98□□□□□ -0.97
MSH5-213ENST00000468136 VASH2Q86V25 355 aa8.98□□□□□ -0.97
MSH5-213ENST00000468136 LSRQ86X29 649 aaPredicted RBP8.98□□□□□ -0.97
MSH5-213ENST00000468136 WDFY1Q8IWB7 410 aa8.98□□□□□ -0.97
MSH5-213ENST00000468136 FDCSPQ8NFU4 85 aa8.98□□□□□ -0.97
MSH5-213ENST00000468136 OR4M1Q8NGD0 313 aa8.98□□□□□ -0.97
MSH5-213ENST00000468136 OR10S1Q8NGN2 331 aa8.98□□□□□ -0.97
MSH5-213ENST00000468136 LGALS14Q8TCE9 139 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms