RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 A0A1B0GVI7 797 aa1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 TSPAN11A1L157 253 aa1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 PRSS37A4D1T9 235 aa1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 CENPXA8MT69 81 aa1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 HIDE1A8MVS5 230 aa1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 ZNF99A8MXY4 864 aaPredicted RBP1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 ZNF879B4DU55 563 aa1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 SMKR1H3BMG3 65 aa1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 H3BNH8 94 aa1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 PSMD11O00231 422 aa1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 PLPP1O14494 284 aa1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 SLC31A2O15432 143 aa1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 NUPL2O15504 423 aaKnown RBP1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 RAD51CO43502 376 aa1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 XRCC2O43543 280 aa1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 KDELR3O43731 214 aa1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 FAM189A1O60320 539 aa1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 SPAG7O75391 227 aa1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 TNFSF13O75888 250 aa1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 UTS2O95399 124 aa1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 ZNF286BP0CG31 522 aa1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 CFHR2P36980 270 aa1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 SLC26A3P40879 764 aa1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 RFC3P40938 356 aa1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 NBL1P41271 181 aa1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 GPR1P46091 355 aa1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 CD151P48509 253 aa1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 CCR6P51684 374 aa1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 FGF8P55075 233 aaPredicted RBP1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 RPS15AP62244 130 aaKnown RBP1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 LCN2P80188 198 aa1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 REG3AQ06141 175 aa1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 AQP6Q13520 282 aa1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 OR7A5Q15622 319 aa1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 ZNF726P1Q15940 193 aa1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 SGCAQ16586 387 aa1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 RPEL1Q2QD12 228 aa1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 ZNF829Q3KNS6 432 aaPredicted RBP1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 Q3ZCU0 254 aa1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 ZBED5Q49AG3 693 aa1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 COA6Q5JTJ3 125 aaKnown RBP1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 PAGE3Q5JUK9 113 aa1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 Q5W150 140 aa1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 ADNP2Q6IQ32 1131 aa1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 ACP7Q6ZNF0 438 aa1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 TMEM179Q6ZVK1 233 aa1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 COX15Q7KZN9 410 aa1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 OAFQ86UD1 273 aa1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 CSGALNACT2Q8N6G5 542 aa1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 ASCC1Q8N9N2 400 aaKnown RBP1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 DUSP18Q8NEJ0 188 aa1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 CCDC54Q8NEL0 328 aa1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 OR4F15Q8NGB8 312 aa1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 OR51L1Q8NGJ5 315 aa1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 OR10G9Q8NGN4 311 aa1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 OR13C9Q8NGT0 318 aa1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 OR2A1Q8NGT9 310 aa1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 OR2G3Q8NGZ4 309 aa1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 LKAAEAR1Q8TD35 194 aa1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 APH1BQ8WW43 257 aa1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 ISOC2Q96AB3 205 aa1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 TMIGD2Q96BF3 282 aa1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 FAM3DQ96BQ1 224 aa1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 MSANTD3Q96H12 275 aa1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 DNAJC1Q96KC8 554 aaKnown RBP1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 OR2M2Q96R28 347 aa1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 RASL11BQ9BPW5 248 aa1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 NRIP2Q9BQI9 281 aa1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 GABARAPL3Q9BY60 117 aa1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 PLA2G12AQ9BZM1 189 aa1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 TM6SF2Q9BZW4 377 aa1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 OR11A1Q9GZK7 315 aa1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 GAL3ST2Q9H3Q3 398 aa1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 CLMPQ9H6B4 373 aa1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 EML4Q9HC35 981 aaKnown RBP1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 ACP6Q9NPH0 428 aa1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 PRSS16Q9NQE7 514 aa1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 CTPS2Q9NRF8 586 aa1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 MCUBQ9NWR8 336 aa1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 CLN6Q9NWW5 311 aa1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 ZNF629Q9UEG4 869 aaPredicted RBP1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 DDX19BQ9UMR2 479 aa1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 ZNF835Q9Y2P0 537 aa1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 RCL1Q9Y2P8 373 aaKnown RBP1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 TMEM94Q12767 1356 aa1.34□□□□□ -2.19
GTF3C3-209ENST00000466862 PCM1Q15154 2024 aa1.34□□□□□ -2.19
GTF3C3-209ENST00000466862 A0A0G2JN53 185 aa1.34□□□□□ -2.19
GTF3C3-209ENST00000466862 CIB4A0PJX0 185 aa1.34□□□□□ -2.19
GTF3C3-209ENST00000466862 H0YHG0 523 aa1.34□□□□□ -2.19
GTF3C3-209ENST00000466862 XKRYO14609 159 aa1.34□□□□□ -2.19
GTF3C3-209ENST00000466862 POLR1CO15160 346 aaPredicted RBP1.34□□□□□ -2.19
GTF3C3-209ENST00000466862 RNF113AO15541 343 aaKnown RBP1.34□□□□□ -2.19
GTF3C3-209ENST00000466862 MPDU1O75352 247 aa1.34□□□□□ -2.19
GTF3C3-209ENST00000466862 SRP72O76094 671 aaKnown RBP1.34□□□□□ -2.19
GTF3C3-209ENST00000466862 ETHE1O95571 254 aa1.34□□□□□ -2.19
GTF3C3-209ENST00000466862 C6orf47O95873 294 aa1.34□□□□□ -2.19
GTF3C3-209ENST00000466862 MOSP00540 346 aa1.34□□□□□ -2.19
GTF3C3-209ENST00000466862 KLK1P06870 262 aa1.34□□□□□ -2.19
GTF3C3-209ENST00000466862 DCNP07585 359 aaKnown RBP1.34□□□□□ -2.19
GTF3C3-209ENST00000466862 IGHV3-43DP0DP04 118 aa1.34□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms