RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 KLF14Q8TD94 323 aaPredicted RBP8.11□□□□□ -1.11
SDCCAG3-208ENST00000466579 ST7LQ8TDW4 575 aa8.11□□□□□ -1.11
SDCCAG3-208ENST00000466579 SLC7A6Q92536 515 aa8.11□□□□□ -1.11
SDCCAG3-208ENST00000466579 COG8Q96MW5 612 aa8.11□□□□□ -1.11
SDCCAG3-208ENST00000466579 CIB1Q99828 191 aa8.11□□□□□ -1.11
SDCCAG3-208ENST00000466579 ATF6BQ99941 703 aa8.11□□□□□ -1.11
SDCCAG3-208ENST00000466579 RBM4BQ9BQ04 359 aaKnown RBP8.11□□□□□ -1.11
SDCCAG3-208ENST00000466579 SYT3Q9BQG1 590 aa8.11□□□□□ -1.11
SDCCAG3-208ENST00000466579 C1QTNF5Q9BXJ0 243 aa8.11□□□□□ -1.11
SDCCAG3-208ENST00000466579 TEX12Q9BXU0 123 aa8.11□□□□□ -1.11
SDCCAG3-208ENST00000466579 RAB1BQ9H0U4 201 aa8.11□□□□□ -1.11
SDCCAG3-208ENST00000466579 SEMA6AQ9H2E6 1030 aa8.11□□□□□ -1.11
SDCCAG3-208ENST00000466579 MS4A5Q9H3V2 200 aa8.11□□□□□ -1.11
SDCCAG3-208ENST00000466579 MED20Q9H944 212 aa8.11□□□□□ -1.11
SDCCAG3-208ENST00000466579 WDR76Q9H967 626 aa8.11□□□□□ -1.11
SDCCAG3-208ENST00000466579 S100A14Q9HCY8 104 aa8.11□□□□□ -1.11
SDCCAG3-208ENST00000466579 MYOZ1Q9NP98 299 aaPredicted RBP8.11□□□□□ -1.11
SDCCAG3-208ENST00000466579 SLCO1C1Q9NYB5 712 aa8.11□□□□□ -1.11
SDCCAG3-208ENST00000466579 NKIRAS2Q9NYR9 191 aa8.11□□□□□ -1.11
SDCCAG3-208ENST00000466579 USE1Q9NZ43 259 aa8.11□□□□□ -1.11
SDCCAG3-208ENST00000466579 POLR1DQ9Y2S0 133 aa8.11□□□□□ -1.11
SDCCAG3-208ENST00000466579 CR1P17927 2039 aa8.11□□□□□ -1.11
SDCCAG3-208ENST00000466579 TEP1Q99973 2627 aaKnown RBP8.11□□□□□ -1.11
SDCCAG3-208ENST00000466579 ZANQ9Y493 2812 aa8.1□□□□□ -1.11
SDCCAG3-208ENST00000466579 TRIM64A6NGJ6 449 aa8.1□□□□□ -1.11
SDCCAG3-208ENST00000466579 TVP23AA6NH52 213 aa8.1□□□□□ -1.11
SDCCAG3-208ENST00000466579 TRIM64BA6NI03 449 aa8.1□□□□□ -1.11
SDCCAG3-208ENST00000466579 VWC2LB2RUY7 222 aa8.1□□□□□ -1.11
SDCCAG3-208ENST00000466579 ZNF593O00488 134 aaPredicted RBP8.1□□□□□ -1.11
SDCCAG3-208ENST00000466579 SSX4O60224 188 aa8.1□□□□□ -1.11
SDCCAG3-208ENST00000466579 HLA-DQA2P01906 255 aa8.1□□□□□ -1.11
SDCCAG3-208ENST00000466579 ALPLP05186 524 aa8.1□□□□□ -1.11
SDCCAG3-208ENST00000466579 ADRA2AP08913 450 aa8.1□□□□□ -1.11
SDCCAG3-208ENST00000466579 DBHP09172 617 aa8.1□□□□□ -1.11
SDCCAG3-208ENST00000466579 ACSM4P0C7M7 580 aa8.1□□□□□ -1.11
SDCCAG3-208ENST00000466579 KITLGP21583 273 aa8.1□□□□□ -1.11
SDCCAG3-208ENST00000466579 IGFBP5P24593 272 aa8.1□□□□□ -1.11
SDCCAG3-208ENST00000466579 GSTT1P30711 240 aa8.1□□□□□ -1.11
SDCCAG3-208ENST00000466579 MPV17P39210 176 aa8.1□□□□□ -1.11
SDCCAG3-208ENST00000466579 MMP15P51511 669 aa8.1□□□□□ -1.11
SDCCAG3-208ENST00000466579 NUDT6P53370 316 aa8.1□□□□□ -1.11
SDCCAG3-208ENST00000466579 SELENOVP59797 346 aa8.1□□□□□ -1.11
SDCCAG3-208ENST00000466579 MRPS11P82912 194 aaKnown RBP8.1□□□□□ -1.11
SDCCAG3-208ENST00000466579 GABPB1Q06547 395 aaPredicted RBP8.1□□□□□ -1.11
SDCCAG3-208ENST00000466579 SNAPC1Q16533 368 aa8.1□□□□□ -1.11
SDCCAG3-208ENST00000466579 PLBD1Q6P4A8 553 aa8.1□□□□□ -1.11
SDCCAG3-208ENST00000466579 FBXW12Q6X9E4 464 aa8.1□□□□□ -1.11
SDCCAG3-208ENST00000466579 CPOQ8IVL8 374 aa8.1□□□□□ -1.11
SDCCAG3-208ENST00000466579 CIARTQ8N365 385 aaPredicted RBP8.1□□□□□ -1.11
SDCCAG3-208ENST00000466579 OR2AJ1Q8NGZ0 328 aa8.1□□□□□ -1.11
SDCCAG3-208ENST00000466579 ABHD4Q8TB40 342 aa8.1□□□□□ -1.11
SDCCAG3-208ENST00000466579 C10orf105Q8TEF2 133 aa8.1□□□□□ -1.11
SDCCAG3-208ENST00000466579 C18orf12Q96KH6 178 aa8.1□□□□□ -1.11
SDCCAG3-208ENST00000466579 CDADC1Q9BWV3 514 aa8.1□□□□□ -1.11
SDCCAG3-208ENST00000466579 OR2J1Q9GZK6 312 aa8.1□□□□□ -1.11
SDCCAG3-208ENST00000466579 POFUT1Q9H488 388 aa8.1□□□□□ -1.11
SDCCAG3-208ENST00000466579 DYNLRB1Q9NP97 96 aa8.1□□□□□ -1.11
SDCCAG3-208ENST00000466579 CGGBP1Q9UFW8 167 aaPredicted RBP8.1□□□□□ -1.11
SDCCAG3-208ENST00000466579 GPR160Q9UJ42 338 aa8.1□□□□□ -1.11
SDCCAG3-208ENST00000466579 FZR1Q9UM11 496 aa8.1□□□□□ -1.11
SDCCAG3-208ENST00000466579 STARD10Q9Y365 291 aa8.1□□□□□ -1.11
SDCCAG3-208ENST00000466579 YLPM1P49750 1951 aaKnown RBP8.1□□□□□ -1.11
SDCCAG3-208ENST00000466579 IGHV4-30-2A0A087WSY4 118 aa8.09□□□□□ -1.11
SDCCAG3-208ENST00000466579 A0A1B0GWJ7 208 aa8.09□□□□□ -1.11
SDCCAG3-208ENST00000466579 CCDC182A6NF36 153 aa8.09□□□□□ -1.11
SDCCAG3-208ENST00000466579 SAC3D1A6NKF1 404 aa8.09□□□□□ -1.11
SDCCAG3-208ENST00000466579 C17orf100A8MU93 164 aa8.09□□□□□ -1.11
SDCCAG3-208ENST00000466579 H7C1Q1 480 aa8.09□□□□□ -1.11
SDCCAG3-208ENST00000466579 NDUFS8O00217 210 aa8.09□□□□□ -1.11
SDCCAG3-208ENST00000466579 PRKYO43930 277 aa8.09□□□□□ -1.11
SDCCAG3-208ENST00000466579 ERCC1P07992 297 aaPredicted RBP8.09□□□□□ -1.11
SDCCAG3-208ENST00000466579 SLC25A16P16260 332 aa8.09□□□□□ -1.11
SDCCAG3-208ENST00000466579 GIFP27352 417 aa8.09□□□□□ -1.11
SDCCAG3-208ENST00000466579 LIPAP38571 399 aa8.09□□□□□ -1.11
SDCCAG3-208ENST00000466579 RPS27P42677 84 aaKnown RBP8.09□□□□□ -1.11
SDCCAG3-208ENST00000466579 ALDH3B1P43353 468 aa8.09□□□□□ -1.11
SDCCAG3-208ENST00000466579 ALDH3A2P51648 485 aa8.09□□□□□ -1.11
SDCCAG3-208ENST00000466579 PSG7Q13046 419 aa8.09□□□□□ -1.11
SDCCAG3-208ENST00000466579 GGTLC2Q14390 218 aa8.09□□□□□ -1.11
SDCCAG3-208ENST00000466579 MAD2L1BPQ15013 274 aaPredicted RBP8.09□□□□□ -1.11
SDCCAG3-208ENST00000466579 AADACL4Q5VUY2 407 aa8.09□□□□□ -1.11
SDCCAG3-208ENST00000466579 CLEC2AQ6UVW9 174 aa8.09□□□□□ -1.11
SDCCAG3-208ENST00000466579 CXXC5Q7LFL8 322 aaKnown RBP8.09□□□□□ -1.11
SDCCAG3-208ENST00000466579 SHFQ7M4L6 423 aa8.09□□□□□ -1.11
SDCCAG3-208ENST00000466579 DCXRQ7Z4W1 244 aa8.09□□□□□ -1.11
SDCCAG3-208ENST00000466579 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.09□□□□□ -1.11
SDCCAG3-208ENST00000466579 BIVMQ86UB2 503 aa8.09□□□□□ -1.11
SDCCAG3-208ENST00000466579 ZCCHC24Q8N2G6 241 aaKnown RBP8.09□□□□□ -1.11
SDCCAG3-208ENST00000466579 PQLC1Q8N2U9 271 aa8.09□□□□□ -1.11
SDCCAG3-208ENST00000466579 ZNF786Q8N393 782 aa8.09□□□□□ -1.11
SDCCAG3-208ENST00000466579 ZNF525Q8N782 197 aa8.09□□□□□ -1.11
SDCCAG3-208ENST00000466579 ICA1LQ8NDH6 482 aa8.09□□□□□ -1.11
SDCCAG3-208ENST00000466579 BBS1Q8NFJ9 593 aa8.09□□□□□ -1.11
SDCCAG3-208ENST00000466579 OR6K6Q8NGW6 343 aa8.09□□□□□ -1.11
SDCCAG3-208ENST00000466579 RNF133Q8WVZ7 376 aa8.09□□□□□ -1.11
SDCCAG3-208ENST00000466579 APOBEC3DQ96AK3 386 aaPredicted RBP8.09□□□□□ -1.11
SDCCAG3-208ENST00000466579 HAVCR1Q96D42 359 aa8.09□□□□□ -1.11
SDCCAG3-208ENST00000466579 INTS14Q96SY0 518 aa8.09□□□□□ -1.11
SDCCAG3-208ENST00000466579 PITX2Q99697 317 aa8.09□□□□□ -1.11
SDCCAG3-208ENST00000466579 VRK1Q99986 396 aaPredicted RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms