RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 DNAH9Q9NYC9 4486 aa8.14□□□□□ -1.11
USP39-212ENST00000465514 EFCAB9A8MZ26 197 aa8.14□□□□□ -1.11
USP39-212ENST00000465514 FAM220BPB1ANY3 271 aa8.14□□□□□ -1.11
USP39-212ENST00000465514 J3KTA2 159 aa8.14□□□□□ -1.11
USP39-212ENST00000465514 SGCEO43556 437 aa8.14□□□□□ -1.11
USP39-212ENST00000465514 DOK2O60496 412 aa8.14□□□□□ -1.11
USP39-212ENST00000465514 CLPXO76031 633 aa8.14□□□□□ -1.11
USP39-212ENST00000465514 TNFRSF1AP19438 455 aa8.14□□□□□ -1.11
USP39-212ENST00000465514 TUBG1P23258 451 aa8.14□□□□□ -1.11
USP39-212ENST00000465514 RPL4P36578 427 aaKnown RBP8.14□□□□□ -1.11
USP39-212ENST00000465514 HTR5AP47898 357 aa8.14□□□□□ -1.11
USP39-212ENST00000465514 PROK1P58294 105 aa8.14□□□□□ -1.11
USP39-212ENST00000465514 BTG1P62324 171 aa8.14□□□□□ -1.11
USP39-212ENST00000465514 PRKCDQ05655 676 aa8.14□□□□□ -1.11
USP39-212ENST00000465514 SCRN3Q0VDG4 424 aa8.14□□□□□ -1.11
USP39-212ENST00000465514 KLF10Q13118 480 aa8.14□□□□□ -1.11
USP39-212ENST00000465514 TRAM2Q15035 370 aa8.14□□□□□ -1.11
USP39-212ENST00000465514 ANKDD1AQ495B1 522 aa8.14□□□□□ -1.11
USP39-212ENST00000465514 COQ5Q5HYK3 327 aa8.14□□□□□ -1.11
USP39-212ENST00000465514 C1orf94Q6P1W5 598 aa8.14□□□□□ -1.11
USP39-212ENST00000465514 VASH1Q7L8A9 365 aaPredicted RBP8.14□□□□□ -1.11
USP39-212ENST00000465514 PARP8Q8N3A8 854 aa8.14□□□□□ -1.11
USP39-212ENST00000465514 OR2T12Q8NG77 320 aa8.14□□□□□ -1.11
USP39-212ENST00000465514 OR13C2Q8NGS9 318 aa8.14□□□□□ -1.11
USP39-212ENST00000465514 ITLN1Q8WWA0 313 aa8.14□□□□□ -1.11
USP39-212ENST00000465514 SLC7A6Q92536 515 aa8.14□□□□□ -1.11
USP39-212ENST00000465514 HAVCR1Q96D42 359 aa8.14□□□□□ -1.11
USP39-212ENST00000465514 SIGLEC11Q96RL6 698 aa8.14□□□□□ -1.11
USP39-212ENST00000465514 SLC30A2Q9BRI3 323 aa8.14□□□□□ -1.11
USP39-212ENST00000465514 WACQ9BTA9 647 aa8.14□□□□□ -1.11
USP39-212ENST00000465514 MRI1Q9BV20 369 aa8.14□□□□□ -1.11
USP39-212ENST00000465514 FNDC11Q9BVV2 318 aa8.14□□□□□ -1.11
USP39-212ENST00000465514 CHIAQ9BZP6 476 aa8.14□□□□□ -1.11
USP39-212ENST00000465514 TUBG2Q9NRH3 451 aa8.14□□□□□ -1.11
USP39-212ENST00000465514 IL19Q9UHD0 177 aa8.14□□□□□ -1.11
USP39-212ENST00000465514 PPP1R3CQ9UQK1 317 aa8.14□□□□□ -1.11
USP39-212ENST00000465514 ADAM18Q9Y3Q7 739 aa8.14□□□□□ -1.11
USP39-212ENST00000465514 INSIG2Q9Y5U4 225 aa8.14□□□□□ -1.11
USP39-212ENST00000465514 SNX13Q9Y5W8 968 aa8.14□□□□□ -1.11
USP39-212ENST00000465514 ELOVL7A1L3X0 281 aa8.13□□□□□ -1.11
USP39-212ENST00000465514 BBIP1A8MTZ0 92 aa8.13□□□□□ -1.11
USP39-212ENST00000465514 A8MXK9 166 aa8.13□□□□□ -1.11
USP39-212ENST00000465514 SRRM5B3KS81 715 aa8.13□□□□□ -1.11
USP39-212ENST00000465514 F5H0A9 414 aaPredicted RBP8.13□□□□□ -1.11
USP39-212ENST00000465514 TMEM178BH3BS89 294 aa8.13□□□□□ -1.11
USP39-212ENST00000465514 FFAR1O14842 300 aa8.13□□□□□ -1.11
USP39-212ENST00000465514 SURF4O15260 269 aa8.13□□□□□ -1.11
USP39-212ENST00000465514 OPN1MWP04001 364 aa8.13□□□□□ -1.11
USP39-212ENST00000465514 OPN1MW2P0DN77 364 aa8.13□□□□□ -1.11
USP39-212ENST00000465514 OPN1MW3P0DN78 364 aa8.13□□□□□ -1.11
USP39-212ENST00000465514 ZNF26P17031 533 aaPredicted RBP8.13□□□□□ -1.11
USP39-212ENST00000465514 MDH2P40926 338 aaKnown RBP8.13□□□□□ -1.11
USP39-212ENST00000465514 SLC9A3P48764 834 aa8.13□□□□□ -1.11
USP39-212ENST00000465514 ERFP50548 548 aa8.13□□□□□ -1.11
USP39-212ENST00000465514 PRR20EP86478 221 aa8.13□□□□□ -1.11
USP39-212ENST00000465514 PRR20CP86479 221 aa8.13□□□□□ -1.11
USP39-212ENST00000465514 PRR20DP86480 221 aa8.13□□□□□ -1.11
USP39-212ENST00000465514 PRR20BP86481 221 aa8.13□□□□□ -1.11
USP39-212ENST00000465514 PRR20AP86496 221 aa8.13□□□□□ -1.11
USP39-212ENST00000465514 ESCO2Q56NI9 601 aa8.13□□□□□ -1.11
USP39-212ENST00000465514 OTPQ5XKR4 325 aa8.13□□□□□ -1.11
USP39-212ENST00000465514 TBPL2Q6SJ96 375 aa8.13□□□□□ -1.11
USP39-212ENST00000465514 VTCN1Q7Z7D3 282 aa8.13□□□□□ -1.11
USP39-212ENST00000465514 RNF113BQ8IZP6 322 aaKnown RBP8.13□□□□□ -1.11
USP39-212ENST00000465514 OFCC1Q8IZS5 231 aa8.13□□□□□ -1.11
USP39-212ENST00000465514 LINC01006Q8NI28 216 aa8.13□□□□□ -1.11
USP39-212ENST00000465514 LZICQ8WZA0 190 aa8.13□□□□□ -1.11
USP39-212ENST00000465514 PTP4A1Q93096 173 aa8.13□□□□□ -1.11
USP39-212ENST00000465514 Q96M85 177 aa8.13□□□□□ -1.11
USP39-212ENST00000465514 OR2V2Q96R30 315 aa8.13□□□□□ -1.11
USP39-212ENST00000465514 SAR1AQ9NR31 198 aa8.13□□□□□ -1.11
USP39-212ENST00000465514 NECAP2Q9NVZ3 263 aa8.13□□□□□ -1.11
USP39-212ENST00000465514 GID8Q9NWU2 228 aa8.13□□□□□ -1.11
USP39-212ENST00000465514 GMPR2Q9P2T1 348 aaKnown RBP8.13□□□□□ -1.11
USP39-212ENST00000465514 GRHPRQ9UBQ7 328 aa8.13□□□□□ -1.11
USP39-212ENST00000465514 A0A087WUU8 490 aa8.12□□□□□ -1.11
USP39-212ENST00000465514 PRSS37A4D1T9 235 aa8.12□□□□□ -1.11
USP39-212ENST00000465514 XKRYO14609 159 aa8.12□□□□□ -1.11
USP39-212ENST00000465514 CDC42EP2O14613 210 aa8.12□□□□□ -1.11
USP39-212ENST00000465514 AHCYL1O43865 530 aa8.12□□□□□ -1.11
USP39-212ENST00000465514 ZNF682O95780 498 aa8.12□□□□□ -1.11
USP39-212ENST00000465514 PLATP00750 562 aa8.12□□□□□ -1.11
USP39-212ENST00000465514 IFNW1P05000 195 aa8.12□□□□□ -1.11
USP39-212ENST00000465514 CD14P08571 375 aa8.12□□□□□ -1.11
USP39-212ENST00000465514 WNT2P09544 360 aa8.12□□□□□ -1.11
USP39-212ENST00000465514 RAC2P15153 192 aa8.12□□□□□ -1.11
USP39-212ENST00000465514 CTLA4P16410 223 aa8.12□□□□□ -1.11
USP39-212ENST00000465514 CD80P33681 288 aa8.12□□□□□ -1.11
USP39-212ENST00000465514 GPR4P46093 362 aa8.12□□□□□ -1.11
USP39-212ENST00000465514 GUCY1A3Q02108 690 aa8.12□□□□□ -1.11
USP39-212ENST00000465514 PAX8Q06710 450 aa8.12□□□□□ -1.11
USP39-212ENST00000465514 SF3A3Q12874 501 aaKnown RBP eCLIP8.12□□□□□ -1.11
USP39-212ENST00000465514 MAPRE2Q15555 327 aa8.12□□□□□ -1.11
USP39-212ENST00000465514 DEFB112Q30KQ8 113 aa8.12□□□□□ -1.11
USP39-212ENST00000465514 ZBED5Q49AG3 693 aa8.12□□□□□ -1.11
USP39-212ENST00000465514 MESTQ5EB52 335 aa8.12□□□□□ -1.11
USP39-212ENST00000465514 ZNF730Q6ZMV8 503 aa8.12□□□□□ -1.11
USP39-212ENST00000465514 TMPRSS11FQ6ZWK6 438 aa8.12□□□□□ -1.11
USP39-212ENST00000465514 MBOAT2Q6ZWT7 520 aa8.12□□□□□ -1.11
USP39-212ENST00000465514 FAM122BQ7Z309 247 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms