RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 OR2H1Q9GZK4 316 aa15.13■□□□□ 0.01
CPSF4-209ENST00000465132 PLEK2Q9NYT0 353 aa15.13■□□□□ 0.01
CPSF4-209ENST00000465132 DNAJC27Q9NZQ0 273 aa15.13■□□□□ 0.01
CPSF4-209ENST00000465132 LAMP5Q9UJQ1 280 aa15.13■□□□□ 0.01
CPSF4-209ENST00000465132 FBN3Q75N90 2809 aa15.13■□□□□ 0.01
CPSF4-209ENST00000465132 PRR14LQ5THK1 2151 aa15.12■□□□□ 0.01
CPSF4-209ENST00000465132 TVP23AA6NH52 213 aa15.12■□□□□ 0.01
CPSF4-209ENST00000465132 VSTM5A8MXK1 200 aa15.12■□□□□ 0.01
CPSF4-209ENST00000465132 RNF223E7ERA6 249 aa15.12■□□□□ 0.01
CPSF4-209ENST00000465132 MMP7P09237 267 aaPredicted RBP15.12■□□□□ 0.01
CPSF4-209ENST00000465132 ZNF32P17041 273 aa15.12■□□□□ 0.01
CPSF4-209ENST00000465132 GABRB1P18505 474 aa15.12■□□□□ 0.01
CPSF4-209ENST00000465132 MYF6P23409 242 aa15.12■□□□□ 0.01
CPSF4-209ENST00000465132 RAB40BQ12829 278 aa15.12■□□□□ 0.01
CPSF4-209ENST00000465132 RAB35Q15286 201 aa15.12■□□□□ 0.01
CPSF4-209ENST00000465132 MAPK1IP1LQ8NDC0 245 aa15.12■□□□□ 0.01
CPSF4-209ENST00000465132 SPATA3Q8NHX4 192 aa15.12■□□□□ 0.01
CPSF4-209ENST00000465132 SMAP2Q8WU79 429 aaPredicted RBP15.12■□□□□ 0.01
CPSF4-209ENST00000465132 NEUROG1Q92886 237 aa15.12■□□□□ 0.01
CPSF4-209ENST00000465132 FOXN4Q96NZ1 517 aa15.12■□□□□ 0.01
CPSF4-209ENST00000465132 DCLRE1CQ96SD1 692 aaKnown RBP15.12■□□□□ 0.01
CPSF4-209ENST00000465132 SP140LQ9H930 580 aa15.12■□□□□ 0.01
CPSF4-209ENST00000465132 SCN3BQ9NY72 215 aa15.12■□□□□ 0.01
CPSF4-209ENST00000465132 OR6C6A6NF89 314 aa15.11■□□□□ 0.01
CPSF4-209ENST00000465132 ZNF670-ZNF695F2Z2N8 137 aa15.11■□□□□ 0.01
CPSF4-209ENST00000465132 M0R129 80 aa15.11■□□□□ 0.01
CPSF4-209ENST00000465132 M0R1B8 84 aa15.11■□□□□ 0.01
CPSF4-209ENST00000465132 DOK2O60496 412 aa15.11■□□□□ 0.01
CPSF4-209ENST00000465132 MPZL1O95297 269 aa15.11■□□□□ 0.01
CPSF4-209ENST00000465132 LYNP07948 512 aa15.11■□□□□ 0.01
CPSF4-209ENST00000465132 OR2T7P0C7T2 308 aa15.11■□□□□ 0.01
CPSF4-209ENST00000465132 GDI2P50395 445 aaKnown RBP15.11■□□□□ 0.01
CPSF4-209ENST00000465132 ZNF83P51522 516 aa15.11■□□□□ 0.01
CPSF4-209ENST00000465132 CXCR4P61073 352 aa15.11■□□□□ 0.01
CPSF4-209ENST00000465132 TAF13Q15543 124 aa15.11■□□□□ 0.01
CPSF4-209ENST00000465132 ZNF672Q499Z4 452 aaPredicted RBP15.11■□□□□ 0.01
CPSF4-209ENST00000465132 PABPC1L2AQ5JQF8 200 aa15.11■□□□□ 0.01
CPSF4-209ENST00000465132 ELFN2Q5R3F8 820 aa15.11■□□□□ 0.01
CPSF4-209ENST00000465132 SEZ6L2Q6UXD5 910 aa15.11■□□□□ 0.01
CPSF4-209ENST00000465132 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.11■□□□□ 0.01
CPSF4-209ENST00000465132 EGFL6Q8IUX8 553 aa15.11■□□□□ 0.01
CPSF4-209ENST00000465132 TIGD4Q8IY51 512 aa15.11■□□□□ 0.01
CPSF4-209ENST00000465132 OR2T27Q8NH04 317 aa15.11■□□□□ 0.01
CPSF4-209ENST00000465132 OTOSQ8NHW6 89 aa15.11■□□□□ 0.01
CPSF4-209ENST00000465132 SPTSSAQ969W0 71 aa15.11■□□□□ 0.01
CPSF4-209ENST00000465132 FBXO17Q96EF6 278 aa15.11■□□□□ 0.01
CPSF4-209ENST00000465132 COG8Q96MW5 612 aa15.11■□□□□ 0.01
CPSF4-209ENST00000465132 CDH20Q9HBT6 801 aa15.11■□□□□ 0.01
CPSF4-209ENST00000465132 INPP5EQ9NRR6 644 aa15.11■□□□□ 0.01
CPSF4-209ENST00000465132 MRPL22Q9NWU5 206 aaKnown RBP15.11■□□□□ 0.01
CPSF4-209ENST00000465132 EIF3KQ9UBQ5 218 aaKnown RBP15.11■□□□□ 0.01
CPSF4-209ENST00000465132 BLOC1S6Q9UL45 172 aa15.11■□□□□ 0.01
CPSF4-209ENST00000465132 A0A1W2PR80 420 aa15.1■□□□□ 0.01
CPSF4-209ENST00000465132 CCDC182A6NF36 153 aa15.1■□□□□ 0.01
CPSF4-209ENST00000465132 EFCAB10A6NFE3 127 aa15.1■□□□□ 0.01
CPSF4-209ENST00000465132 DENRO43583 198 aaKnown RBP15.1■□□□□ 0.01
CPSF4-209ENST00000465132 CLIC3O95833 236 aa15.1■□□□□ 0.01
CPSF4-209ENST00000465132 IGLV1-44P01699 117 aa15.1■□□□□ 0.01
CPSF4-209ENST00000465132 SBK2P0C263 348 aa15.1■□□□□ 0.01
CPSF4-209ENST00000465132 STOMP27105 288 aa15.1■□□□□ 0.01
CPSF4-209ENST00000465132 CDKN1AP38936 164 aa15.1■□□□□ 0.01
CPSF4-209ENST00000465132 RGS6P49758 472 aa15.1■□□□□ 0.01
CPSF4-209ENST00000465132 IDH3GP51553 393 aaPredicted RBP15.1■□□□□ 0.01
CPSF4-209ENST00000465132 GRB2P62993 217 aaKnown RBP15.1■□□□□ 0.01
CPSF4-209ENST00000465132 HIST1H3AP68431 136 aa15.1■□□□□ 0.01
CPSF4-209ENST00000465132 PSG4Q00888 419 aa15.1■□□□□ 0.01
CPSF4-209ENST00000465132 GALK2Q01415 458 aa15.1■□□□□ 0.01
CPSF4-209ENST00000465132 BSPH1Q075Z2 132 aa15.1■□□□□ 0.01
CPSF4-209ENST00000465132 CDK5R2Q13319 367 aa15.1■□□□□ 0.01
CPSF4-209ENST00000465132 EIF2B1Q14232 305 aaKnown RBP15.1■□□□□ 0.01
CPSF4-209ENST00000465132 MEP1BQ16820 701 aa15.1■□□□□ 0.01
CPSF4-209ENST00000465132 HIST2H3PS2Q5TEC6 136 aa15.1■□□□□ 0.01
CPSF4-209ENST00000465132 DEGS2Q6QHC5 323 aa15.1■□□□□ 0.01
CPSF4-209ENST00000465132 UGT2A3Q6UWM9 527 aa15.1■□□□□ 0.01
CPSF4-209ENST00000465132 HIST2H3AQ71DI3 136 aa15.1■□□□□ 0.01
CPSF4-209ENST00000465132 DPY19L4Q7Z388 723 aa15.1■□□□□ 0.01
CPSF4-209ENST00000465132 DCXRQ7Z4W1 244 aa15.1■□□□□ 0.01
CPSF4-209ENST00000465132 SLC30A7Q8NEW0 376 aa15.1■□□□□ 0.01
CPSF4-209ENST00000465132 OR51G2Q8NGK0 314 aa15.1■□□□□ 0.01
CPSF4-209ENST00000465132 UBE2FQ969M7 185 aa15.1■□□□□ 0.01
CPSF4-209ENST00000465132 RNFT2Q96EX2 444 aa15.1■□□□□ 0.01
CPSF4-209ENST00000465132 COQ7Q99807 217 aa15.1■□□□□ 0.01
CPSF4-209ENST00000465132 ATF6BQ99941 703 aa15.1■□□□□ 0.01
CPSF4-209ENST00000465132 MROQ9BYG7 248 aa15.1■□□□□ 0.01
CPSF4-209ENST00000465132 REG4Q9BYZ8 158 aa15.1■□□□□ 0.01
CPSF4-209ENST00000465132 NIPAL2Q9H841 368 aa15.1■□□□□ 0.01
CPSF4-209ENST00000465132 ZNF224Q9NZL3 707 aa15.1■□□□□ 0.01
CPSF4-209ENST00000465132 GDF2Q9UK05 429 aaPredicted RBP15.1■□□□□ 0.01
CPSF4-209ENST00000465132 LHFPL6Q9Y693 200 aa15.1■□□□□ 0.01
CPSF4-209ENST00000465132 DPRXA6NFQ7 191 aa15.09■□□□□ 0.01
CPSF4-209ENST00000465132 ZNF878C9JN71 531 aa15.09■□□□□ 0.01
CPSF4-209ENST00000465132 ZNF254O75437 659 aa15.09■□□□□ 0.01
CPSF4-209ENST00000465132 GNAO1P09471 354 aa15.09■□□□□ 0.01
CPSF4-209ENST00000465132 DBTP11182 482 aaKnown RBP15.09■□□□□ 0.01
CPSF4-209ENST00000465132 ZNF14P17017 642 aaPredicted RBP15.09■□□□□ 0.01
CPSF4-209ENST00000465132 TUBG1P23258 451 aa15.09■□□□□ 0.01
CPSF4-209ENST00000465132 NAA10P41227 235 aaPredicted RBP15.09■□□□□ 0.01
CPSF4-209ENST00000465132 HTR5AP47898 357 aa15.09■□□□□ 0.01
CPSF4-209ENST00000465132 TUBA1BP68363 451 aa15.09■□□□□ 0.01
CPSF4-209ENST00000465132 TUBA4AP68366 448 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms